Gene

KWMTBOMO12505

Pre Gene Modal

BGIBMGA001504

Annotation

peritrophin_1_[Mamestra_configurata]

Location

Bomo_Chr21(+):5418332-5421228      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.801 Nuclear   Reliability : 1.785

CDS

ATGGAAAAATTTAAAGGTATTCTATTAGTATTATACGCAGTCGCATTGTCAAATGCATCTGTCATCAAAGAAAACACCAATAAAGCTACCAAAGGGGTCAATTTCGAATCCGGTAAAGCTACTGAAATCTGTGCTCGTATAGGTTCAGATGGTATACTAGTTGCTCATGAACATTGCACAAGATTTTATAAATGTGCAGAAGGTCGTCCTGTAGCACTTAAGTGCCCTCCAAATCTATTGTTTAATCCTAGCAACGAGCAATGTGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAGACGACGATGATGTTGATAGTGAAAGTGACAATGGCAGTGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCCGACCCCAGCCTGGCTACTGAAATATGTGCTGAAAAAGATTCAGACGGTGTTCTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCGATAGTCATCCAGTAGCCCTCATTTGTCCTCCAAATCTGTTGTATAATCCTAATAACGAGCAGTGCGACTGGCCTCATAATGTAGAGTGTGGAGACAGAATCATTCCAGAAGACGACGAGGATGTTGATAGTGAAAGTGACAATGGCAGTGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCCGACCCCAGCCTGGCTACTGAAATATGTGCTGAAAAAGATTCAGACGGTGTTCTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCGATAGTCATCCAGTAGCCCTCATTTGTCCTCCAAATCTGTTGTATAATCCTAATAACGAGCAGTGCGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAGACGACGAGGATGTTGATAGTGAAAGTGACAATGGTAATGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCCGACCCCAGCCTGGCTACTGAAATATGTGCTGAAAAAGATTCAGACGGTGTTTTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCAATAGTCATCCAGTAGCCCTCATTTGTCCTCCAAATCTATTGTATAATCCTAATAACGAGCAGTGCGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAGACGACGAGGATGTTGATAGTGAAAGTGACAATGGCAGTGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCCGACCCCAGCCTGGCTACTGAAATATGTGCTGAAAAAGATTCAGACGGTGTTCTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCGATAGTCATCCAGTAGCCCTCATTTGTCCTCCAAATCTGTTGTATAATCCTAATAACGAGCAGTGCGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAGACGACGAGGATGTTGATAGTGAAAGTGACAATGGCAGTGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCCGACCCCAGCCTGGCTACTGAAATATGTGCTGAAAAAGATTCAGACGGTGTTCTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCGATAGTCATCCAGTAGCCCTCATTTGTCCTCCAAATCTGTTGTATAATCCTAATAACGAGCAGTGCGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAGACGACGAGGATGTTGATAGTGAAAGTGACAATGGTAATGGAGGAAACGGAAACGAAAACGATAACACTGGAAATGGACACGCTGACCCCAGCCTGGCTACTGAAATTTGTGCTGAAAATGATTCAGACGGTGTTTTGGTCGCCCATGAGCACTGCACCAGATTTTACAAATGTTTCAATAGTCGTCCAGTAGCCCTCATTTGTCCGCCAAATCTGTTGTATAATCCTAGTAACGAGCAGTGTGACTGGCCTCATAATGTAGAGTGTGGAGACAGAACCATTCCAGAAAACGTCGAGGATGAGGACAACGATAATGCCAGCGATGGCAATTTGGACGGAAACGAAAATGAAGGCAATGACAACAGCAGCGGTAACTGCGATCCCAGCGCAGCTCCTACGTTGTGTGCTCAAACTGGTTCAGATAGTGTTCTAATTGCCCACGAAAATTGTGATAAATTTTACATATGCTGGAACCACAAGCCTGTAGTTCTCAGCTGTCCTCCAAATCTCCTCTACAATCCATCGAAAGAAGAATGCGATTGGCCTCAGAATGTCGACTGCGGTTCAAGAATTATTCCATAA

Protein

MEKFKGILLVLYAVALSNASVIKENTNKATKGVNFESGKATEICARIGSDGILVAHEHCTRFYKCAEGRPVALKCPPNLLFNPSNEQCDWPHNVECGDRTIPEDDDDVDSESDNGSGGNGNENDNTGNGHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRIIPEDDEDVDSESDNGSGGNGNENDNTGNGHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIPEDDEDVDSESDNGNGGNGNENDNTGNGHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFNSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIPEDDEDVDSESDNGSGGNGNENDNTGNGHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIPEDDEDVDSESDNGSGGNGNENDNTGNGHADPSLATEICAEKDSDGVLVAHEHCTRFYKCFDSHPVALICPPNLLYNPNNEQCDWPHNVECGDRTIPEDDEDVDSESDNGNGGNGNENDNTGNGHADPSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIPENVEDEDNDNASDGNLDGNENEGNDNSSGNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRIIP

Uniprot

Q86BV0   A0A2A4JPM5   Q6VAP0   B6CAP5   C4N8D2   A0A3S2M5L1   + More
A0A212EJK6   A0A3S2LQ37   A0A2A4JAZ3   A0A194Q044   A0A2H1V8J7   A0A3R7PK84   C4N881   M1EYJ2   A0A1W5C8V7   D1MAJ8   A0A3G5BIJ9   M1EWR5   A0A1S4HEA2   E2C958   A0A088BU36   A0A151WLI9   A0A158N966   A0A195CTW7   A0A195FP78   A0A3S2NBP7   A0A195B4N7   A0A087T425   A0A3L8E3H8   A0A3L8E266  

Pubmed

15475304    14871618    22118469    26354079    12364791    18362917    + More
20144715    19820115    30400621    20798317    21347285    30249741   

EMBL

AY277403    AAP33177.1    NWSH01000891    PCG73658.1    AY345124    AAR06265.1    + More
EU139126    ABW98673.1    FJ408730    ACQ65651.1    RSAL01000033    RVE51508.1    AGBW02014451    OWR41650.1    RVE51509.1    NWSH01002232    PCG68868.1    KQ459585    KPI98364.1    ODYU01001235    SOQ37170.1    QCYY01001877    ROT74564.1    FJ393548    ACR20468.1    JF681185    AFD28281.1    AAAB01008986    EAA00508.4    GU128106    KQ971357    ACY95489.1    KYB26070.1    MK075202    AYV99605.1    JF681186    AFD28282.1    GL453780    EFN75531.1    KC703970    AHH02588.1    KQ982959    KYQ48703.1    ADTU01008736    ADTU01008737    KQ977279    KYN04138.1    KQ981382    KYN42258.1    RSAL01000265    RVE43282.1    KQ976618    KYM79154.1    KK113308    KFM59864.1    QOIP01000001    RLU27300.1    RLU26612.1   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000283509    UP000007062    + More
UP000007266    UP000008237    UP000075809    UP000005205    UP000078542    UP000078541    UP000078540    UP000054359    UP000279307   

Pfam

PF01607   CBM_14

Interpro

IPR002557   Chitin-bd_dom        + More
IPR036508   Chitin-bd_dom_sf       
IPR006626   PbH1       

SUPFAM

SSF57625   SSF57625       

ProteinModelPortal

Q86BV0   A0A2A4JPM5   Q6VAP0   B6CAP5   C4N8D2   A0A3S2M5L1   + More
A0A212EJK6   A0A3S2LQ37   A0A2A4JAZ3   A0A194Q044   A0A2H1V8J7   A0A3R7PK84   C4N881   M1EYJ2   A0A1W5C8V7   D1MAJ8   A0A3G5BIJ9   M1EWR5   A0A1S4HEA2   E2C958   A0A088BU36   A0A151WLI9   A0A158N966   A0A195CTW7   A0A195FP78   A0A3S2NBP7   A0A195B4N7   A0A087T425   A0A3L8E3H8   A0A3L8E266  

PDB

6G9E     E-value=7.42652e-10,     Score=156

KEGG

101738492    no KO assigned | (RefSeq) chondroitin proteoglycan 2-like

GO

GO:0006030   GO:0005576   GO:0008061   GO:0016021   GO:0005622   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

SignalP

Position:   1 - 19,         Likelihood:  0.997593

 

 

Length:

776

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.23961

Exp number, first 60 AAs:

0.23961

Total prob of N-in:

0.01416

outside

1  -  776

 

 

Pi

236.754828

Theta

150.354117

Tajima's D

2.096021

CLR

1.070455

CSRT

0.898155092245388

Interpretation

Uncertain