Gene

KWMTBOMO12503

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr21(-):5312809-5376571      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.869

CDS

ATGCGGCACCAGACTACATCTCCACTAGGCCGGGTGGGACCCACTGCGTCCCTGCGAGACTCCGAGCCCGACTTTGCTGGACCAATAGAAAACGTCACAGTAGCTCTCGGCAGGGAAGCCATACTCACCTGCTCAGTCACCGACCTTGGAGACTACAAGGTAGCCTGGATTCGAGCAGATGATCAAACTATCCTCACACTCCACACGAGGCTGGTGACGCACAGCTCTCGGTATGCGGTTACCAACGATTCTCCGCATTCCTGGCAACTCCACATAAGACCTCTGAAGGTAGAAGATCGGGGCTGCTACATGTGCCAGATAAATACCAGCACGATGAAGAAGCAGATCGGCTGTGTGAATGTGCTAGTTCCACCGAACATCGTAGATAAAGGCACGAGTGGAGATCTCGTTGCACGCGAAGGTCAAGACACAAGTCTATCCTGCAAAGCCGAAGGAACACCACTCCCGCGAATTTTGTGGAGAAGAGAAGACGGTACCAACATTCAACTCAGGAATGAAGCCGGCGATCTTCGAAAAGTTGACATGTTCATGGGACCAAATTTAAACCTAACAAAAGTAGAACGACGACAGATGGGAGCATACCTTTGTATCGCGTCAAACGAAGTTCCACCTTCAGTCAGCAAAAGGATAATGCTGAATGTTAATTTTCCACCATCAATCCTGGTGGCGACCAAGGTCATCGGCGTGCCGACAGGATCACAAGCCAAACTGGAATGTTTCGTCGAGGCGTTTCCACAAGCTATTAATTATTGGCTCAAGAGCGGCGAAGAGATGATTCTTTCCAATTCCAAATATAATTTAACGGAAGATCGAATATCCCAGTACCAACTCCGAACCATTCTACAGATTTCGAAGTTTGAGCCTGAAGATATAGGCACCTACACGTGCGTCTCCACAAATACGATGGGAAAGTCGGAAGGGACATTAAGACTTTATGGTGAGTTTTTATGA

Protein

MRHQTTSPLGRVGPTASLRDSEPDFAGPIENVTVALGREAILTCSVTDLGDYKVAWIRADDQTILTLHTRLVTHSSRYAVTNDSPHSWQLHIRPLKVEDRGCYMCQINTSTMKKQIGCVNVLVPPNIVDKGTSGDLVAREGQDTSLSCKAEGTPLPRILWRREDGTNIQLRNEAGDLRKVDMFMGPNLNLTKVERRQMGAYLCIASNEVPPSVSKRIMLNVNFPPSILVATKVIGVPTGSQAKLECFVEAFPQAINYWLKSGEEMILSNSKYNLTEDRISQYQLRTILQISKFEPEDIGTYTCVSTNTMGKSEGTLRLYGEFL

Uniprot

A0A3S2NFW5   A0A212F862   A0A2A4IVJ7   A0A194Q082   A0A0N0PCD5   D6WCY6   + More
A0A1B6DBF6   A0A1B6KXD0   A0A139WNB8   E0VYZ0   D6WCY9   A0A139WN83   A0A1W4XLM5   A0A2A4K566   A0A437B3S3   A0A194QC96   A0A194RDC2   A0A1B0GE93   A0A067RKA0   A0A1A9Z6V7   A0A1A9XQ95   A0A1B0B834   W8AMF9   A0A0A1X2R8   A0A1I8MV17   Q17P54   A0A1W4WKV8   A0A1I8PK55   A0A1J1J0K1   A0A1B0GHU3   A0A182LCJ9   A0A1B0GIU2   A0A1J1J3M1   Q7QBC5   A0A1I8PK30   A0A182USC5   A0A2C9H8C1   A0A1A9UMF1   A0A336N405   A0A1W4VVW5   A0A453YJK6   N6T454   A0A182IP77   U4UDP3   Q16M91   B4KDU1   A0A2H8TWC3   A0A1A9X1V2   A0A3B0K1B9   B4G4W2   Q298Y7   A0A182L8U0   A0A0L7RHX4   B4PQM8   B4M062   B3P5N5   B4N9K3   B3LXP5   Q9VAR6   B4QYV4   B4HZ33   B4JTC2   A0A437BJF4   Q5TQN9   A0A182NQK4   A0A182Q388   A0A0P8Y1B6   Q17DU8   A0A2S2P3R2   A0A182TD00   A0A182KEE5   A0A182YBE1   E0V9A6   A0A182HKI9   A0A182RNJ6   A0A182M6I9   A0A182X9K6   A0A453Z0K5   A0A026X2K4   J9JYG8   A0A2S2PC71   A0A182VDP8   Q7PXA4   A0A0L0CNQ0   A0A1Y1L5Q2   E1ZV74   A0A084VXU9   A0A182JK23   D6W7P0   A0A2H8TU39   A0A437BJU2   A0A182VVT5   A0A158N9S9   A0A2A4JLN5   A0A158N9A5   A0A194PPY2   A0A1E1W0X2   T1IV88   A0A195CCJ1  

Pubmed

22118469    26354079    18362917    19820115    20566863    24845553    + More
24495485    25830018    25315136    17510324    20966253    12364791    14747013    17210077    23537049    17994087    18057021    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    30688651    25244985    24508170    26108605    28004739    20798317    24438588    21347285   

EMBL

RSAL01000128    RVE46511.1    AGBW02009782    OWR49926.1    NWSH01006973    PCG63170.1    + More
KQ459585    KPI98404.1    KQ460622    KPJ13528.1    KQ971311    EEZ99076.2    GEDC01014275    GEDC01008700    JAS23023.1    JAS28598.1    GEBQ01023864    JAT16113.1    KYB29490.1    DS235848    EEB18596.1    EEZ99078.1    KYB29489.1    NWSH01000118    PCG79381.1    RSAL01000186    RVE44805.1    KQ459193    KPJ03087.1    KQ460325    KPJ15838.1    CCAG010012177    CCAG010012178    KK852460    KDR23453.1    JXJN01009819    GAMC01020882    GAMC01020879    JAB85673.1    GBXI01009247    JAD05045.1    CH477194    EAT48443.1    CVRI01000064    CRL05482.1    AJWK01005625    AJWK01005626    AJWK01005627    AJWK01005628    AJWK01005629    AJWK01005630    AJWK01005631    AJWK01005632    AJWK01005633    AJWK01005634    AJWK01017657    CRL05481.1    AAAB01008879    EAA08340.4    UFQT01002324    SSX33218.1    APCN01002137    APCN01002138    APCN01002139    APCN01002140    APCN01002141    APCN01002142    APGK01044470    APGK01044471    APGK01044472    APGK01044473    APGK01044474    KB741026    ENN74934.1    KB632309    ERL92094.1    CH477872    EAT35448.1    CH933806    EDW14938.2    KRG01288.1    KRG01289.1    GFXV01006037    MBW17842.1    OUUW01000013    SPP88067.1    CH479179    EDW24628.1    CM000070    EAL27817.2    KQ414589    KOC70419.1    CM000160    EDW98367.1    CH940650    EDW68312.2    CH954182    EDV53285.1    CH964232    EDW81679.1    CH902617    EDV43939.1    AE014297    AY060653    AAF56835.1    AAL28201.1    CM000364    EDX14773.1    CH480819    EDW53290.1    CH916373    EDV95012.1    RSAL01000047    RVE50523.1    AAAB01008963    EAL39761.3    AXCN02001517    KPU80550.1    CH477291    EAT44564.1    GGMR01011502    MBY24121.1    DS234991    EEB09962.1    APCN01000831    AXCM01001271    AAAB01008987    KK107024    EZA62236.1    ABLF02039711    ABLF02039721    ABLF02039724    ABLF02039727    ABLF02039728    ABLF02039730    ABLF02047045    GGMR01014375    MBY26994.1    EAA01197.5    JRES01000236    KNC33079.1    GEZM01068577    JAV66886.1    GL434441    EFN74933.1    ATLV01018207    KE525224    KFB42793.1    KQ971307    EFA11252.2    GFXV01005968    MBW17773.1    RVE50525.1    ADTU01009347    ADTU01009348    ADTU01009349    ADTU01009350    ADTU01009351    ADTU01009352    ADTU01009353    ADTU01009354    ADTU01009355    ADTU01009356    NWSH01001156    PCG72322.1    ADTU01009130    ADTU01009131    ADTU01009132    ADTU01009133    ADTU01009134    ADTU01009135    ADTU01009136    ADTU01009137    ADTU01009138    KQ459597    KPI94794.1    GDQN01010475    JAT80579.1    JH431578    KQ977935    KYM98574.1   

Proteomes

UP000283053    UP000007151    UP000218220    UP000053268    UP000053240    UP000007266    + More
UP000009046    UP000192223    UP000092444    UP000027135    UP000092445    UP000092443    UP000092460    UP000095301    UP000008820    UP000095300    UP000183832    UP000092461    UP000075882    UP000007062    UP000075903    UP000076407    UP000078200    UP000192221    UP000075840    UP000019118    UP000075880    UP000030742    UP000009192    UP000091820    UP000268350    UP000008744    UP000001819    UP000053825    UP000002282    UP000008792    UP000008711    UP000007798    UP000007801    UP000000803    UP000000304    UP000001292    UP000001070    UP000075884    UP000075886    UP000075902    UP000075881    UP000076408    UP000075900    UP000075883    UP000053097    UP000007819    UP000037069    UP000000311    UP000030765    UP000075920    UP000005205    UP000078542   

PRIDE

Q9VAR6   

Pfam

PF00047   ig        + More
PF07679   I-set
PF07686   V-set

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A3S2NFW5   A0A212F862   A0A2A4IVJ7   A0A194Q082   A0A0N0PCD5   D6WCY6   + More
A0A1B6DBF6   A0A1B6KXD0   A0A139WNB8   E0VYZ0   D6WCY9   A0A139WN83   A0A1W4XLM5   A0A2A4K566   A0A437B3S3   A0A194QC96   A0A194RDC2   A0A1B0GE93   A0A067RKA0   A0A1A9Z6V7   A0A1A9XQ95   A0A1B0B834   W8AMF9   A0A0A1X2R8   A0A1I8MV17   Q17P54   A0A1W4WKV8   A0A1I8PK55   A0A1J1J0K1   A0A1B0GHU3   A0A182LCJ9   A0A1B0GIU2   A0A1J1J3M1   Q7QBC5   A0A1I8PK30   A0A182USC5   A0A2C9H8C1   A0A1A9UMF1   A0A336N405   A0A1W4VVW5   A0A453YJK6   N6T454   A0A182IP77   U4UDP3   Q16M91   B4KDU1   A0A2H8TWC3   A0A1A9X1V2   A0A3B0K1B9   B4G4W2   Q298Y7   A0A182L8U0   A0A0L7RHX4   B4PQM8   B4M062   B3P5N5   B4N9K3   B3LXP5   Q9VAR6   B4QYV4   B4HZ33   B4JTC2   A0A437BJF4   Q5TQN9   A0A182NQK4   A0A182Q388   A0A0P8Y1B6   Q17DU8   A0A2S2P3R2   A0A182TD00   A0A182KEE5   A0A182YBE1   E0V9A6   A0A182HKI9   A0A182RNJ6   A0A182M6I9   A0A182X9K6   A0A453Z0K5   A0A026X2K4   J9JYG8   A0A2S2PC71   A0A182VDP8   Q7PXA4   A0A0L0CNQ0   A0A1Y1L5Q2   E1ZV74   A0A084VXU9   A0A182JK23   D6W7P0   A0A2H8TU39   A0A437BJU2   A0A182VVT5   A0A158N9S9   A0A2A4JLN5   A0A158N9A5   A0A194PPY2   A0A1E1W0X2   T1IV88   A0A195CCJ1  

PDB

6EFY     E-value=1.65443e-80,     Score=761

KEGG

101738220    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0007529   GO:0032589   GO:1904396   GO:0072499   GO:0050808   GO:0005887   GO:0005515   GO:0005840   GO:0006412   GO:0005622   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

Length:

323

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00645

Exp number, first 60 AAs:

3e-05

Total prob of N-in:

0.02074

outside

1  -  323

 

 

Pi

26.432601

Theta

172.941158

Tajima's D

1.122064

CLR

0.281608

CSRT

0.692715364231788

Interpretation

Uncertain