Gene

KWMTBOMO12495  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001500

Annotation

PREDICTED:_mitochondrial_ribosomal_protein_L2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr21(+):5005705-5014789      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.661

CDS

ATGGCCTTAAACAGGCTTTTTTCTAACTTAACCATCGCTACTGCGATGGTGGCGAGACGAAATCTTCACGTTGGTGTTGTTCATTCTGCGAGTAAACCCAATATAGAAAAGCCGAAACCTGGTTTCGGAAAAAGTTACAGGCGTATTGTACATTTTCCTGAACAATATACAGTAAAACCTTTAGAAGTTACAAATCTAGCTGGAAGGGATCCAGAAACAGGACGTGTGGTCGCTAAAGGTATCGGAGGAGGTATAAAACACAAATATCACTGGATAGACTGGTACAGAGTTGGGCCTACTGAGGGTCCACCACAAGAAGAAAAAGTTATACAGATTATAGAAGATGGATGCAGAACTGCGCATGTAGCTTTAGTGGCAGTTGGTGACAAGTTAAAATATATTTTAGCCACCGAGAACATGAAAGCTGGGGATATAATCAAAACATCCTGTAAACTCCCTAGAATACCAGTTCGTGCAAATGAAGGCGATGCTTACGTATTAGGAGCTTTACCTATAGGAACGATAGTGCACTGCGTCGAGAAAGAACCTGGTCAAGGCGGTCTATACATACACGCGGCAGGCACGTCTGGGACCATCGTGAGGAAACAAGACGACAGAGTTATTGTTCAGATGCCTTCCAAAAGACTATTTAGTTTCAATCAGCTTTGTATGGCCGTTGTTGGTCGTCTGTCCAACGTTCTTCACGGCAGCACACCTATAGGGTCCCCACAGCGGAACAGGTGGCTCGGGAACCGGCCTCGCTCAGGTCTGTGGCAGCGGAAGTCTGGTCGTCACGGAAGAAAGATCAAACCCCCAAAACCTGTCAAACAAATCTGCAATCCGACGAGCACCAAATTGCCGCCCATAATACTAAATATGACACCATAA

Protein

MALNRLFSNLTIATAMVARRNLHVGVVHSASKPNIEKPKPGFGKSYRRIVHFPEQYTVKPLEVTNLAGRDPETGRVVAKGIGGGIKHKYHWIDWYRVGPTEGPPQEEKVIQIIEDGCRTAHVALVAVGDKLKYILATENMKAGDIIKTSCKLPRIPVRANEGDAYVLGALPIGTIVHCVEKEPGQGGLYIHAAGTSGTIVRKQDDRVIVQMPSKRLFSFNQLCMAVVGRLSNVLHGSTPIGSPQRNRWLGNRPRSGLWQRKSGRHGRKIKPPKPVKQICNPTSTKLPPIILNMTP

Uniprot

H9IW69   A0A2A4K5E4   A0A194Q077   A0A3S2TQS4   A0A212F882   A0A2H1WH24   + More
G8FVP1   A0A2A4K3P1   A0A0N1I753   A0A182G8B7   Q17PV7   A0A023EMS8   A0A067R0Y7   A0A182QEE1   A0A2M4AMQ7   D6WAB3   A0A2M4ANN6   A0A2M4BVD6   A0A2M3ZBT3   A0A182JXX1   A0A182W3U4   U4UV22   A0A182FM55   J3JV67   A0A182X852   A0A1Y1JYR4   W5JTZ5   A0A182T0J4   B0WP17   A0A182M278   A0A182YIQ6   A0A182RJQ1   A0A084VDC4   A0A182NDM8   A0A182UBQ4   A0A182VH59   A0A1Q3FB10   A0A182IRB6   A0A182HXB0   A0A182LNB7   Q7QDW0   A0A1B0DI44   A0A1B0AQS8   A0A1B0G4N6   A0A1A9YIJ4   B4LC50   A0A1A9ZKE9   B4IY04   A0A1L8DRL7   A0A0A1XRF1   A0A1I8M1S5   B3M3W8   A0A1L8DRM4   T1PEW5   E2B2V9   F4X749   A0A1A9UG37   A0A3B0JAJ3   A0A151XHA1   B4N5E0   A0A1A9WE09   K7IU71   A0A1W4WE75   Q2LZ31   A0A0M3QWH0   A0A1I8NU12   A0A336K1N7   A0A195FHT2   A0A034W2P8   A0A195C2K4   B4L178   E2APJ6   A0A195DJ70   W8C846   A0A0K8TRS5   A0A0K8UTK2   A0A232FA04   Q8MYY5   A0A0K8W4K9   Q9VTF8   B4HDW7   A0A195B0P4   B4QPQ3   B5RJ52   B4PEM3   A0A1W4W443   A0A0L0C0E2   B3NGS0   A0A154PH14   A0A0J7K8Y2   A0A310SJA3   A0A026WHU9   A0A0P4VQK3   T1HTN0   T1GR58   A0A088AGE9   A0A0A9WKF0   A0A0L7RJE4   A0A2A3EP66  

Pubmed

19121390    26354079    22118469    26483478    17510324    24945155    + More
24845553    18362917    19820115    23537049    22516182    28004739    20920257    23761445    25244985    24438588    20966253    12364791    14747013    17210077    17994087    25830018    25315136    20798317    21719571    20075255    15632085    25348373    24495485    26369729    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304    26108605    24508170    30249741    27129103    25401762    26823975   

EMBL

BABH01005934    BABH01005935    BABH01005936    NWSH01000166    PCG78880.1    KQ459585    + More
KPI98399.1    RSAL01000020    RVE52602.1    AGBW02009774    OWR49954.1    ODYU01008628    SOQ52371.1    JN082711    AER27809.1    PCG78881.1    KQ461068    KPJ09881.1    JXUM01047600    KQ561527    KXJ78271.1    CH477188    EAT48837.1    GAPW01002930    JAC10668.1    KK852793    KDR16451.1    AXCN02001747    GGFK01008567    MBW41888.1    KQ971312    EEZ98033.1    GGFK01009085    MBW42406.1    GGFJ01007894    MBW57035.1    GGFM01005222    MBW25973.1    KB632375    ERL94040.1    BT127134    AEE62096.1    GEZM01097303    JAV54283.1    ADMH02000098    ETN67827.1    DS232018    EDS32044.1    AXCM01000213    ATLV01011253    KE524658    KFB35968.1    GFDL01010281    JAV24764.1    APCN01005172    AAAB01008849    EAA07137.2    AJVK01061978    JXJN01002025    CCAG010020614    CH940647    EDW70878.1    CH916366    EDV97547.1    GFDF01004982    JAV09102.1    GBXI01017038    GBXI01000740    JAC97253.1    JAD13552.1    CH902618    EDV39302.1    GFDF01005060    JAV09024.1    KA647281    AFP61910.1    GL445250    EFN89928.1    GL888828    EGI57661.1    OUUW01000002    SPP77473.1    KQ982130    KYQ59784.1    CH964101    EDW79579.1    AAZX01004929    CH379069    EAL29678.2    CP012525    ALC44133.1    UFQS01000027    UFQT01000027    SSW97722.1    SSX18108.1    KQ981560    KYN39938.1    GAKP01009109    GAKP01009106    JAC49846.1    KQ978379    KYM94441.1    CH933809    EDW19260.1    GL441542    EFN64652.1    KQ980800    KYN12867.1    GAMC01003229    JAC03327.1    GDAI01000536    JAI17067.1    GDHF01022481    JAI29833.1    NNAY01000557    OXU27681.1    AY113486    AAM29491.1    GDHF01006310    JAI46004.1    AE014296    AAF50091.1    CH480815    EDW41057.1    KQ976690    KYM78031.1    CM000363    CM002912    EDX10044.1    KMY98935.1    BT044326    ACH92391.1    CM000159    EDW94089.1    JRES01001072    KNC25763.1    CH954178    EDV51377.1    KQ434902    KZC11149.1    LBMM01011732    KMQ86661.1    KQ759821    OAD62701.1    KK107199    QOIP01000009    EZA55578.1    RLU18967.1    GDKW01003150    JAI53445.1    ACPB03018759    CAQQ02004897    GBHO01034682    GBRD01007488    GDHC01007800    JAG08922.1    JAG58333.1    JAQ10829.1    KQ414581    KOC70954.1    KZ288200    PBC33603.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000007151    UP000053240    + More
UP000069940    UP000249989    UP000008820    UP000027135    UP000075886    UP000007266    UP000075881    UP000075920    UP000030742    UP000069272    UP000076407    UP000000673    UP000075901    UP000002320    UP000075883    UP000076408    UP000075900    UP000030765    UP000075884    UP000075902    UP000075903    UP000075880    UP000075840    UP000075882    UP000007062    UP000092462    UP000092460    UP000092444    UP000092443    UP000008792    UP000092445    UP000001070    UP000095301    UP000007801    UP000008237    UP000007755    UP000078200    UP000268350    UP000075809    UP000007798    UP000091820    UP000002358    UP000192223    UP000001819    UP000092553    UP000095300    UP000078541    UP000078542    UP000009192    UP000000311    UP000078492    UP000215335    UP000000803    UP000001292    UP000078540    UP000000304    UP000002282    UP000192221    UP000037069    UP000008711    UP000076502    UP000036403    UP000053097    UP000279307    UP000015103    UP000015102    UP000005203    UP000053825    UP000242457   

PRIDE

H9IW69    Q8MYY5    Q9VTF8    B5RJ52   

Pfam

PF03947   Ribosomal_L2_C        + More
PF00181   Ribosomal_L2

Interpro

IPR014722   Rib_L2_dom2        + More
IPR022669   Ribosomal_L2_C       
IPR012340   NA-bd_OB-fold       
IPR022666   Rbsml_prot_L2_RNA-bd_dom       
IPR008991   Translation_prot_SH3-like_sf       
IPR002171   Ribosomal_L2       

SUPFAM

SSF50104   SSF50104        + More
SSF50249   SSF50249       

Gene 3D

2.30.30.30    

ProteinModelPortal

H9IW69   A0A2A4K5E4   A0A194Q077   A0A3S2TQS4   A0A212F882   A0A2H1WH24   + More
G8FVP1   A0A2A4K3P1   A0A0N1I753   A0A182G8B7   Q17PV7   A0A023EMS8   A0A067R0Y7   A0A182QEE1   A0A2M4AMQ7   D6WAB3   A0A2M4ANN6   A0A2M4BVD6   A0A2M3ZBT3   A0A182JXX1   A0A182W3U4   U4UV22   A0A182FM55   J3JV67   A0A182X852   A0A1Y1JYR4   W5JTZ5   A0A182T0J4   B0WP17   A0A182M278   A0A182YIQ6   A0A182RJQ1   A0A084VDC4   A0A182NDM8   A0A182UBQ4   A0A182VH59   A0A1Q3FB10   A0A182IRB6   A0A182HXB0   A0A182LNB7   Q7QDW0   A0A1B0DI44   A0A1B0AQS8   A0A1B0G4N6   A0A1A9YIJ4   B4LC50   A0A1A9ZKE9   B4IY04   A0A1L8DRL7   A0A0A1XRF1   A0A1I8M1S5   B3M3W8   A0A1L8DRM4   T1PEW5   E2B2V9   F4X749   A0A1A9UG37   A0A3B0JAJ3   A0A151XHA1   B4N5E0   A0A1A9WE09   K7IU71   A0A1W4WE75   Q2LZ31   A0A0M3QWH0   A0A1I8NU12   A0A336K1N7   A0A195FHT2   A0A034W2P8   A0A195C2K4   B4L178   E2APJ6   A0A195DJ70   W8C846   A0A0K8TRS5   A0A0K8UTK2   A0A232FA04   Q8MYY5   A0A0K8W4K9   Q9VTF8   B4HDW7   A0A195B0P4   B4QPQ3   B5RJ52   B4PEM3   A0A1W4W443   A0A0L0C0E2   B3NGS0   A0A154PH14   A0A0J7K8Y2   A0A310SJA3   A0A026WHU9   A0A0P4VQK3   T1HTN0   T1GR58   A0A088AGE9   A0A0A9WKF0   A0A0L7RJE4   A0A2A3EP66  

PDB

6NU3     E-value=1.40349e-51,     Score=511

KEGG

733060    K02886 large subunit ribosomal protein L2 | (RefSeq) mRpL2, Rpl2; mitochondrial ribosomal protein L2

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0032543   GO:0005762   GO:0005622   GO:0008270   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR13691  

Length:

295

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01174

Exp number, first 60 AAs:

0.0037

Total prob of N-in:

0.00999

outside

1  -  295

 

 

Pi

222.056827

Theta

179.263003

Tajima's D

0.858327

CLR

0.482026

CSRT

0.614269286535673

Interpretation

Uncertain