Gene

KWMTBOMO12490

Pre Gene Modal

BGIBMGA001498

Annotation

PREDICTED:_synaptic_vesicle_glycoprotein_2B-like_[Papilio_xuthus]

Location

Bomo_Chr21(+):4938345-4954987      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.827

CDS

ATGGTAGAAACTGACCCGGGGCCCAAGAATCCTCACAATTGTGATGTAAAAGGGGATCTACAACTAAACGGCCCAGGTTCCAAAACCGCCGAGCTTGGCGTCGTACCTTCAGTTAAGAAATCGAAATCCGATCCGGAGAAGGGCTCCAATTCGGAAAAAGCCGACTTCGAACGGGCTATCGAACTAACCGGATATGGCCGCTTCCACTACATGCTGTTGGCAGTATGCGGTCTCGTCAGCACTTCCGAGGAGATGGACGTCATCTCGATGTCGTTCATCCTACCCTCGGCACAGTGCGACTTAGACCTCACCACTCAGACTAAAGGATGGCTAAACAGTATAATCTTCATCGGTATGATGGTGGGCGCGTACGCTTGGGGTTCAGTGGCAGACTCGCTTGGTCGCAAGCGAGTGCTCATAGCCATCTCCATAGTGAACGCGCTCGCCATCGTCGCCTCCTCCTTCAGTCAGAATTACGAGCTCTTCATGTTCTTCCGCTTCGTGAACGGTGCCGCCTTGGGCGGGTCGGGACCTGTGATTTGGTCGTATTTCGCGGAATTCCAGCCGAAAAAGAAACGTGGGGCCATGTTGAGTTTCATGGCAGCCTTCTGGACTCTTGGTAACCTGTTCGTAGCCGGTTTAGCCTGGGTCATAATTCCGAGTGAAATCGGAGGATCGACCGGGGGCTTCGTGTACAATTCTTGGCGGATATTCCTGCTGGTTATGTCACTGCCTTCATTCGTGGTGGCGGCTTTACTGTTCCTTTTGCCGGAATCACCGAAATTCTTGATCTCGACGGGCCGACACGAAGACGCTCTAGAAGTATTCCGCAGCATCTATCTCATGAACACCGGCCGCAGCAAAGACGAGTACCCAGTGAAACAGATCCTCGTGGACGATCTGGTGCACGCGAAGCCAGAGAAGCAAATAGAATCGAAGGAGCCAAAGTCTAAACTCAGAAGGATGTTGAGCGACATCGTCGAGCACAGCAAGCAGCTGTTTGTTCCGCCTATACTCAAGTTCACTACGATCTCTATTACAATCAACTTTACATTCCATATCGGGTATTACGGTCTGATGATGTGGTTCCCTGAGATGTTCAATCGTTTCGACGAGTGGTCGCGCACGCACGACAACGCCGAAGCGGACATCTGCGAGGTGACGGCGTACGTGACGCGGCTCGGCACGCACTCCGCCGCCGCGCAGTGCGACTCGCACATACACTCGGACGTCTTCATGGAGTCGCTCATCACCGTCGCGGCCGCCATACCCTCCAACATCTTCGCGGTCCTCGGCATGGACAGGCTCGGGAGGAAGTTCTTCCTTGTGTTTGCAACATTCTCGGCTGGCTCGTGTTCGGCCGCCATGTACTTCGTGTACAACAAAACGAACAACCTGATCGTCAGTGCTATATTCAGTTCAGTCATATCCTGCGGCAACGCCTCCCTCGACTGTCTCATCACCGAAGTATTTCCCACGAACTTGAGAGCTACGGGTGTGGCGGTTTCGATGGTAGCAGCTCGACTAGGTGGTATAATTGGCAACGTCGTGATCGCAGCCCTACTGGACACGTACTGTCCGGCGCCGACGTTCATTGTGGCCGTGTTGCTCGCCGGAGGCGGCCTCATGTGTCTCTTCCTGCCCAACACAACGCGACAAGCTTTACAATAA

Protein

MVETDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAALGGSGPVIWSYFAEFQPKKKRGAMLSFMAAFWTLGNLFVAGLAWVIIPSEIGGSTGGFVYNSWRIFLLVMSLPSFVVAALLFLLPESPKFLISTGRHEDALEVFRSIYLMNTGRSKDEYPVKQILVDDLVHAKPEKQIESKEPKSKLRRMLSDIVEHSKQLFVPPILKFTTISITINFTFHIGYYGLMMWFPEMFNRFDEWSRTHDNAEADICEVTAYVTRLGTHSAAAQCDSHIHSDVFMESLITVAAAIPSNIFAVLGMDRLGRKFFLVFATFSAGSCSAAMYFVYNKTNNLIVSAIFSSVISCGNASLDCLITEVFPTNLRATGVAVSMVAARLGGIIGNVVIAALLDTYCPAPTFIVAVLLAGGGLMCLFLPNTTRQALQ

Uniprot

H9IW67   A0A3S2PIS8   A0A2A4J951   A0A2H1W1V2   A0A0N1I5D8   A0A194PYM6   + More
A0A212ESA5   A0A1B0CZL0   A0A1L8DEM9   A0A1L8DEM5   A0A1L8DEK9   A0A1L8DEU3   A0A1B0CHX6   A0A1Q3FMH0   A0A2M3ZYU5   A0A2M3ZEZ1   A0A2M3ZYJ9   A0A2M3ZF42   A0A2M4BIM2   A0A182F474   W5JS86   A0A0K8TPB6   A0A182RW29   A0A182QYJ9   T1E9Y3   A0A182NC72   A0A182YKK5   D6W821   A0A182J0P8   U5EQ91   A0A182KFV8   A0A182M591   A0A182TPF2   A0A084VFI7   A0A023EU38   A0A182VEE6   A0A182KVN2   A0A182WYD2   A0A182I5G1   Q178J2   A0A1S4H589   A0A026W9P6   E2ABF2   A0A1Y1L833   J3JYJ2   A0A2A3E401   Q5TVR1   F4W9J4   A0A087ZQM0   A0A0T6AVW9   A0A151WNG5   A0A195C987   A0A195F5R0   A0A310SA71   A0A151IWL9   E9IIR2   A0A1W4XRK8   A0A182WFY5   V5GNJ1   A0A0J7KLV7   K7IWP6   E2B3Z3   A0A182PJC9   A0A154P8C5   A0A067RJH9   B0FBJ9   A0A1J1IPI5   A0A151HYP7   A0A232EWQ5   A0A1J1J7J4   A0A1B6EF96   T1P9I7   A0A0T6BAT8   A0A0C9RHW6   A0A1I8PV12   Q6U1H1   A0A0L0BPI8   A0A1B6FNW0   A0A034VRR2   A0A336N2J8   A0A336N2T7   A0A336MZY6   A0A0K8UP05   B0WDR9   A0A1B6LJE6   A0A0A1WZ37   E0VS92   W8C1C9   A0A1B6IMQ6   A0A0K8SSY1   A0A0L7R9J3   B4I064   B4R5N9   A0A0R3P3J1   A0A1W4VF69   Q29IM4   A0A3B0KVT5   B4N1G5   B3NXV2   B4PZ73  

Pubmed

19121390    26354079    22118469    20920257    23761445    26369729    + More
25244985    18362917    19820115    24438588    24945155    20966253    17510324    12364791    24508170    30249741    20798317    28004739    22516182    23537049    21719571    21282665    20075255    24845553    28648823    25315136    15157223    26108605    25348373    25830018    20566863    24495485    26823975    17994087    15632085    23185243    17550304   

EMBL

BABH01005928    BABH01005929    BABH01005930    RSAL01000020    RVE52607.1    NWSH01002480    + More
PCG68208.1    ODYU01005784    SOQ47007.1    KQ461068    KPJ09887.1    KQ459585    KPI98437.1    AGBW02012834    OWR44382.1    AJVK01009629    AJVK01009630    GFDF01009186    JAV04898.1    GFDF01009188    JAV04896.1    GFDF01009185    JAV04899.1    GFDF01009187    JAV04897.1    AJWK01012837    AJWK01012838    AJWK01012839    GFDL01006323    JAV28722.1    GGFK01000309    MBW33630.1    GGFM01006373    MBW27124.1    GGFK01000316    MBW33637.1    GGFM01006372    MBW27123.1    GGFJ01003527    MBW52668.1    ADMH02000248    ETN67247.1    GDAI01001409    JAI16194.1    AXCN02001759    GAMD01000892    JAB00699.1    KQ971307    EFA11011.1    GANO01004357    JAB55514.1    AXCM01004479    ATLV01012411    KE524791    KFB36731.1    GAPW01000710    JAC12888.1    APCN01003437    CH477362    EAT42650.1    AAAB01008823    KK107372    QOIP01000004    EZA51744.1    RLU23232.1    GL438237    EFN69273.1    GEZM01068064    GEZM01068063    JAV67237.1    BT128320    KB632399    AEE63278.1    ERL94815.1    KZ288386    PBC26457.1    EAL41476.3    GL888030    EGI69169.1    LJIG01022682    KRT79273.1    KQ982907    KYQ49406.1    KQ978068    KYM97387.1    KQ981810    KYN35409.1    KQ822452    OAD46913.1    KQ980849    KYN12226.1    GL763521    EFZ19541.1    GALX01002772    JAB65694.1    LBMM01005763    KMQ91224.1    GL445428    EFN89580.1    KQ434844    KZC08179.1    KK852643    KDR19553.1    EU290148    ABY56616.1    CVRI01000057    CRL02157.1    KQ976714    KYM76937.1    NNAY01001835    OXU22761.1    CVRI01000075    CRL08371.1    GEDC01000686    JAS36612.1    KA645387    AFP60016.1    LJIG01002486    KRT84454.1    GBYB01006551    JAG76318.1    AY380838    AAQ88395.1    JRES01001651    KNC21144.1    GECZ01017881    JAS51888.1    GAKP01013803    GAKP01013802    GAKP01013801    JAC45149.1    UFQS01004952    UFQT01004952    SSX16632.1    SSX35829.1    UFQS01005213    UFQT01005213    SSX16759.1    SSX35949.1    UFQS01005126    UFQT01005126    SSX16721.1    SSX35912.1    GDHF01023897    GDHF01021039    GDHF01014115    GDHF01013948    GDHF01010407    GDHF01000263    JAI28417.1    JAI31275.1    JAI38199.1    JAI38366.1    JAI41907.1    JAI52051.1    DS231900    EDS44822.1    GEBQ01016209    JAT23768.1    GBXI01017510    GBXI01010170    JAC96781.1    JAD04122.1    DS235746    EEB16248.1    GAMC01011121    JAB95434.1    GECU01019499    JAS88207.1    GBRD01009363    GBRD01009362    GDHC01018949    JAG56462.1    JAP99679.1    KQ414624    KOC67545.1    CH480819    EDW52895.1    CM000366    EDX17276.1    CH379063    KRT06189.1    EAL32629.1    KRT06188.1    OUUW01000021    SPP89491.1    CH963925    EDW78204.2    CH954180    EDV47403.1    CM000162    EDX01040.1    KRK05907.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000092462    UP000092461    UP000069272    UP000000673    UP000075900    UP000075886    UP000075884    UP000076408    UP000007266    UP000075880    UP000075881    UP000075883    UP000075902    UP000030765    UP000075903    UP000075882    UP000076407    UP000075840    UP000008820    UP000053097    UP000279307    UP000000311    UP000030742    UP000242457    UP000007062    UP000007755    UP000005203    UP000075809    UP000078542    UP000078541    UP000078492    UP000192223    UP000075920    UP000036403    UP000002358    UP000008237    UP000075885    UP000076502    UP000027135    UP000183832    UP000078540    UP000215335    UP000095301    UP000095300    UP000037069    UP000002320    UP000009046    UP000053825    UP000001292    UP000000304    UP000001819    UP000192221    UP000268350    UP000007798    UP000008711    UP000002282   

PRIDE

H9IW67   

Pfam

PF07690   MFS_1        + More
PF00083   Sugar_tr
PF01485   IBR

Interpro

IPR005829   Sugar_transporter_CS        + More
IPR036259   MFS_trans_sf       
IPR011701   MFS       
IPR020846   MFS_dom       
IPR005828   MFS_sugar_transport-like       
IPR002867   IBR_dom       
IPR017907   Znf_RING_CS       
IPR013083   Znf_RING/FYVE/PHD       

SUPFAM

SSF103473   SSF103473       

Gene 3D

3.30.40.10    

CDD

cd06174  MFS

ProteinModelPortal

H9IW67   A0A3S2PIS8   A0A2A4J951   A0A2H1W1V2   A0A0N1I5D8   A0A194PYM6   + More
A0A212ESA5   A0A1B0CZL0   A0A1L8DEM9   A0A1L8DEM5   A0A1L8DEK9   A0A1L8DEU3   A0A1B0CHX6   A0A1Q3FMH0   A0A2M3ZYU5   A0A2M3ZEZ1   A0A2M3ZYJ9   A0A2M3ZF42   A0A2M4BIM2   A0A182F474   W5JS86   A0A0K8TPB6   A0A182RW29   A0A182QYJ9   T1E9Y3   A0A182NC72   A0A182YKK5   D6W821   A0A182J0P8   U5EQ91   A0A182KFV8   A0A182M591   A0A182TPF2   A0A084VFI7   A0A023EU38   A0A182VEE6   A0A182KVN2   A0A182WYD2   A0A182I5G1   Q178J2   A0A1S4H589   A0A026W9P6   E2ABF2   A0A1Y1L833   J3JYJ2   A0A2A3E401   Q5TVR1   F4W9J4   A0A087ZQM0   A0A0T6AVW9   A0A151WNG5   A0A195C987   A0A195F5R0   A0A310SA71   A0A151IWL9   E9IIR2   A0A1W4XRK8   A0A182WFY5   V5GNJ1   A0A0J7KLV7   K7IWP6   E2B3Z3   A0A182PJC9   A0A154P8C5   A0A067RJH9   B0FBJ9   A0A1J1IPI5   A0A151HYP7   A0A232EWQ5   A0A1J1J7J4   A0A1B6EF96   T1P9I7   A0A0T6BAT8   A0A0C9RHW6   A0A1I8PV12   Q6U1H1   A0A0L0BPI8   A0A1B6FNW0   A0A034VRR2   A0A336N2J8   A0A336N2T7   A0A336MZY6   A0A0K8UP05   B0WDR9   A0A1B6LJE6   A0A0A1WZ37   E0VS92   W8C1C9   A0A1B6IMQ6   A0A0K8SSY1   A0A0L7R9J3   B4I064   B4R5N9   A0A0R3P3J1   A0A1W4VF69   Q29IM4   A0A3B0KVT5   B4N1G5   B3NXV2   B4PZ73  

PDB

4LDS     E-value=2.20893e-15,     Score=202

KEGG

101745246    K06258 MFS transporter, VNT family, synaptic vesicle glycoprotein 2 | (RefSeq) synaptic vesicle glyc

PATHWAY

04512    ECM-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0005215   GO:0016021   GO:0055085   GO:0022857   GO:0016740   GO:0046872   GO:0005515   GO:0003682   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

Length:

556

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

241.89096

Exp number, first 60 AAs:

0.02008

Total prob of N-in:

0.46682

outside

1  -  109

TMhelix

110  -  129

inside

130  -  137

TMhelix

138  -  157

outside

158  -  161

TMhelix

162  -  184

inside

185  -  196

TMhelix

197  -  219

outside

220  -  233

TMhelix

234  -  256

inside

257  -  340

TMhelix

341  -  363

outside

364  -  410

TMhelix

411  -  433

inside

434  -  439

TMhelix

440  -  460

outside

461  -  464

TMhelix

465  -  487

inside

488  -  499

TMhelix

500  -  522

outside

523  -  526

TMhelix

527  -  549

inside

550  -  556

 

 

Pi

172.097586

Theta

154.196604

Tajima's D

0.007544

CLR

0.478139

CSRT

0.375531223438828

Interpretation

Uncertain