Silkworm Genome Informatics Database

Gene

KWMTBOMO12487

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr21(-):4891765-4893114 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.428 Nuclear Reliability : 1.998

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTTACATACTGAAAAATTTGGATATAACCAAAAGATTCATTTATTGTACCATCAAACGATGCAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAATGGTCGCCCTCGGTCTTTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGACACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAACACATCTTTGATTAAGGCAGCCGCCGATCTTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFYILKNLDITKRFIYCTIKRCNEDSSVDDRSRNGRPRSFRTPAVIKAVKARIQRNPKHSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLNTSLIKAAADLDMDLVRAAIDDWPRRLKACIQNHGGHFE

Similarity

Belongs to the UDP-glycosyltransferase family.

Uniprot

A0A3S2LQG1 A0A437B0M5 A0A0N4Y9Q8 A0A0N4XI93 A0A0N4YHH1 A0A0N4Y0X0 + More
A0A1I7RIM5 A0A0N4Y729 A0A0N4YNS9 A0A0N4XA04 A0A3P7YLE6 A0A0N4X1V3 A0A1I7TCP6

Pubmed

21909270

EMBL

RSAL01000470 RVE41612.1 RSAL01000236 RVE43715.1 UYSL01020934 VDL76658.1 + More
UYSL01002425 VDL65835.1 UYSL01022144 VDL79905.1 UYSL01020109 VDL72812.1 UYSL01020634 VDL75527.1 UYSL01023743 VDL82626.1 UZAF01023081 VDO88391.1 UZAF01020477 VDO70271.1

Proteomes

UP000283053 UP000038043 UP000271162 UP000095284 UP000038042 UP000268014 + More
UP000095282

Pfam

PF00201 UDPGT + More
PF13358 DDE_3

Interpro

IPR009057   Homeobox-like_sf        + More
IPR002213   UDP_glucos_trans
IPR035595   UDP_glycos_trans_CS
IPR038717   Tc1-like_DDE_dom
IPR036388   WH-like_DNA-bd_sf

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.10

ProteinModelPortal

A0A3S2LQG1 A0A437B0M5 A0A0N4Y9Q8 A0A0N4XI93 A0A0N4YHH1 A0A0N4Y0X0 + More
A0A1I7RIM5 A0A0N4Y729 A0A0N4YNS9 A0A0N4XA04 A0A3P7YLE6 A0A0N4X1V3 A0A1I7TCP6

PDB

5CR4 E-value=0.000140103, Score=103

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677 GO:0018024 GO:0005515 GO:0003682 GO:0008270 GO:0016021 GO:0045211 GO:0005975 GO:0004553

Length:

182

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.27251

Exp number, first 60 AAs:

4.27251

Total prob of N-in:

0.19209

outside

1 - 182

Pi

18.370538

Theta

46.471102

Tajima's D

-0.740585

CLR

578.482344

CSRT

0.190190490475476

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree