SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12485
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
Full name
Histone-lysine N-methyltransferase      
Location in the cell
Nuclear   Reliability : 3.76
 

Sequence

CDS
ATGAGCACAGACTTACCAAAAAACCAGAATTCAAGCGGTGAAACTGATTCTAATAGTGATTCAGAGAATAGTGTCTCTACTGAATCATCAGGCAGTGACTGGAAGTGTTCGAATGCTAAACAGAGTTTGGCTCGGAAACCACACTTTTCAGTCACATCTTGTGATACTGGCTTAAAACTGAAAATAGCAGCCATACCACCTAGAAAAGTTTTACCCAAGAAGGCTGCCAAACCAACTGTAAAAAAGAAAACAAACTCAAGTACTAGTACTCCTGTTAAAGAGCGAACCACAGCAGTCAAAAAGAAATCTCAACTATCAGAAACTAGTTCTAGTTCAGATTCATGCAGTAAATGTTCATCAGATTCATCAAGTGATGATGATATACCCTTGAAGGCAGTCTCTAAAACTTTACCTTCTAAATGTTCTCCATCAAAGTCACAATTGAAGTCTAGGAGTGATAGTGACAATGATAAAGCTAGTGATGACAGTAAAGATGCATTGAAATGTAAAGAAAAAAGTGCCAAAAGTAATAATGTAGTTAAAAAGACTAAAAGTGAAGATTCAAATGATGCTGTTGTAAAGAGGGGGAGAGGGAGACCAAGAACCAAGGTAAGATTTTTTATAATGAATTGCCATAGTAATTAG
Protein
MSTDLPKNQNSSGETDSNSDSENSVSTESSGSDWKCSNAKQSLARKPHFSVTSCDTGLKLKIAAIPPRKVLPKKAAKPTVKKKTNSSTSTPVKERTTAVKKKSQLSETSSSSDSCSKCSSDSSSDDDIPLKAVSKTLPSKCSPSKSQLKSRSDSDNDKASDDSKDALKCKEKSAKSNNVVKKTKSEDSNDAVVKRGRGRPRTKVRFFIMNCHSN

Summary

Catalytic Activity
L-lysyl-[histone] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine
EC Number
2.1.1.43
Pfam
PF00856   SET        + More
PF00439   Bromodomain
PF01426   BAH
PF17907   AWS
Interpro
IPR006560   AWS_dom        + More
IPR001214   SET_dom       
IPR036427   Bromodomain-like_sf       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001025   BAH_dom       
IPR001487   Bromodomain       
IPR011011   Znf_FYVE_PHD       
IPR003616   Post-SET_dom       
IPR000637   HMGI/Y_DNA-bd_CS       
SUPFAM
SSF47370   SSF47370        + More
SSF57903   SSF57903       
Gene 3D

Ontologies

Topology

Length:
214
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00019
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.13861
outside
1  -  214
 
 

Population Genetic Test Statistics

Pi
242.361566
Theta
207.752737
Tajima's D
0.500787
CLR
0.007228
CSRT
0.510074496275186
Interpretation
Uncertain
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