Gene

KWMTBOMO12480

Pre Gene Modal

BGIBMGA001473

Annotation

PREDICTED:_bumetanide-sensitive_sodium-(potassium)-chloride_cotransporter-like_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr21(-):4710248-4727492      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.874

CDS

ATGGACGTACGTTTGCTAGGGGACTGTGGGAAAATGGTTCCCAAATCAATGTTGAGACGCAGGCGAAGTGAGTCTGTCGAAATCGGAAACACTAATTGCGAAGTAAATTCCGAAGAAAACGAGAGCAGAAGCACTCGGGAATATAGCAATGGACATTTGCATCCTACTCCGGAACTAACAACGTATGGAGGGATAAAATTAGGATGGATTCAGGGTGTATTGATACCATGTCTCCTCAACATTTGGGGTGTTATGTTGTTTTTACGGATCGCGTGGGTCGTGGCGCAAGCTGGTATAGGTCTTTCGGTCATAATTGTATTCCTTTCCGCCATAGTCTGCGTTATCACGACTCTGTCTCTGAGCGCAATATGCACCAACGGACAACTACAAGGAGGTGGAGTATACTATCTTGTCTCGAGATCACTGGGGGCCGAATTTGGGGCGTCAGTCGGAATACTCTTTGCATTCGCCAACGCTGTAGCGGCCAGTATGAACACTATCGGATTTTGTGATTCTCTAAATCACCTCCTGAAGACGCACGGACTGAAAATCGTTGATAACGACGTAAACGATATCAGGATTGTGGGTGCGGTAGCGCTTTTAGTTATGTGCGTAATTTGTGCCATTGGTATGGACTGGGAAACCAAAGCGCAGAATTTTCTAATAGTCGTAATAGTAGTGGCGATAATAAATTACATTGTCGGAGCACTTATAGGACCCAGTAGTGATGTAGAAAGAGCAAAAGGATTTGTGGGAATAAATTTACAAACTATTCGGGAGAACTGGCTCCCGAATTTTCGCTACAGCGAAGGGCGCGAACACGACTTCTTCAGTGTTTTCGCGGTTTACTTCCCCGCCGTGACTGGCGTGCAGGCGGGGGCCAACATTTGTGGAGATCTCAAGAACCCAGCCGTCGCAATTCCCAAAGGTACTCTTTTAGCGCTGGCCATATCAGTCACGTCGTATTTCACAATGGTGATTCTGTCGGGAATGGGTGCCCTCAGGGACGCGAGCGGTAACGTCGCGAACTTGACAACAGCCGCGCTCGAATCTTGCAAACCTCACTGCGGTTACGGCTTACACAATAACTATGCGATCATGCAGTTAATGTCGGCTTGGGGCCCCTTCATCTACGCGGGCTGCTGGGCGGCGACTCTGTCCACGGCGCTCACCAACTTGCTGTCGGTGCCGCGGCTCATCCAGGCGCTCGGCGTCGACCGCATCTACCCAGGACTCATCTTCTTCTCGAAACCGTACGGACGACACGGAGAGCCCTACAGAGGATACGTACTAACCTTTTTCGTTTCCTTACTGTTTCTACTTATCGCGAATTTGAACGCGATTGCTCCGTTGATAACAAATTTTTACTTGGCCTCATACGCACTTATTAACTTTTGCACCTTTCACGCGGCATTCGTTCACCAAATTAATTGGCGACCCACGTTTCGCTATTACAACAAATGGCTATCGTTGGCCGGGTTCCTAATGTGTGCTTCAATAATGATGATAATCAGCTGGGCGATGGCACTGACTACAATGTTTGTTTTCATGACATTATATCTTCTCGTTCTTTATAGGAAGCCAGACGTGAGCTGGGGTAGCAGCACTGAAGGACAACGTTACCAGGACACGGTCTCATTTATAACTGAGCTCAGTCACCGAGTGACGCACAGTCGCTCGTACAACCCTCAGCTGCTTGTGCTCGCTGGGACACCGCTACAGCGCCCCGCGCTCATCGACGTAGCACACATGCTCACGAAGATAGGATCATTCATGATAGTTGCTGACATTACAGACACTGCATTAACCAAAGGCGAACGTGTCAGCCGTCAGCACATAGGCGAGCAGTTTGTGAAGTATCGCAAACTCCGCGCGTTCTACGTTCTCCTGCAAGGGCTTGACTTGAAGCGCGGCGCCAACGCACTGATGCAAGCTAGTGGGCTTGGAAAACTCTCTCCTAACATATTACTCATAGGATTCAAAAAGGACTGGACGAACGCTGAACATAAACAGATTAGCGACTACTACGGAGTTATCCAAGACGCATTCGATTTGAAGCTTGCGGTAACGATACTGCGAGTCCCCGGGACCTCGCAAACAGTACAGCGGTGGAGGTGGACACCCCGTGTGGTCTCGGAACCGAATAACTTCGAGCTCGTGATGCACACACAAGTACTCGCCCTCATGAACTCTGATTCAGACCTCGAAGACGACGACCAAGCAATCGACGATGATTCTGACAAACTTATCGACTCTGAAAACCAGCTGTCAAACGAAACTTCAAGTAGCGAACAGAATCCAGAATCCATCGGCGGAGAAGCATTACGATCTGCGAACTTTTCCCGGACTTCAAGACGGAAACTTTCAAACGGAGCTTTGTCATTCAGAGCTTTGTCGTTCAATTGCAAACAATACGTAGATGCTTGGTGGCTTTATGAGGATGGTGGTTTGAACATATTGCTTCCGTATATTATTGCACGTCGCGGCTACAAACACAAACTGCCCCTTAGGATATTCGCGATCACGAAAGAACAGCACAAAAGAGAGTTTGAAAATAAATGCATGGAAAGTTTATTGAAAAAATTTCGAATCGAGTACACGGAGCTGACACTGGTGCGAGGGATTGGGGACGCGCCACCCGAGTCGAGTTGGAAAATGTTCAACAACATCATAAACGATTTTAAGTCTGAGGAGAAAACTGATATTTTAACATCGGAAGCCGAGTTGAAGAGTCAGTACAGTAAAACGAGCAGGCATTTGCGACTACGAAACCTTCTGTTGCAACATTCGACAAAAGCCGCTATCGTCATCATTACCCTGCCATTGCCGAGAAAGGTGTCGGCATCGCTGTACATGGCGTGGCTAGAGGTCCTCAGCCGAGATTTGCCGCCCGTGTTATTCGTACGTGGCAACGACTCCTGTGTGTTGGACGCGTAA

Protein

MDVRLLGDCGKMVPKSMLRRRRSESVEIGNTNCEVNSEENESRSTREYSNGHLHPTPELTTYGGIKLGWIQGVLIPCLLNIWGVMLFLRIAWVVAQAGIGLSVIIVFLSAIVCVITTLSLSAICTNGQLQGGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGLKIVDNDVNDIRIVGAVALLVMCVICAIGMDWETKAQNFLIVVIVVAIINYIVGALIGPSSDVERAKGFVGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALRDASGNVANLTTAALESCKPHCGYGLHNNYAIMQLMSAWGPFIYAGCWAATLSTALTNLLSVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYRGYVLTFFVSLLFLLIANLNAIAPLITNFYLASYALINFCTFHAAFVHQINWRPTFRYYNKWLSLAGFLMCASIMMIISWAMALTTMFVFMTLYLLVLYRKPDVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKIGSFMIVADITDTALTKGERVSRQHIGEQFVKYRKLRAFYVLLQGLDLKRGANALMQASGLGKLSPNILLIGFKKDWTNAEHKQISDYYGVIQDAFDLKLAVTILRVPGTSQTVQRWRWTPRVVSEPNNFELVMHTQVLALMNSDSDLEDDDQAIDDDSDKLIDSENQLSNETSSSEQNPESIGGEALRSANFSRTSRRKLSNGALSFRALSFNCKQYVDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFENKCMESLLKKFRIEYTELTLVRGIGDAPPESSWKMFNNIINDFKSEEKTDILTSEAELKSQYSKTSRHLRLRNLLLQHSTKAAIVIITLPLPRKVSASLYMAWLEVLSRDLPPVLFVRGNDSCVLDA

Uniprot

A0A2A4JN03   A0A194Q257   A0A2A4JL60   A0A067QMC3   A0A1B0EWP1   Q16UI3   + More
A0A1S4FNN9   A0A023EWB6   A0A182G664   A0A1Q3FSA3   E0VSF3   B0WKT5   A0A1B6EM82   B0WKT4   A0A1S4FNU9   Q16UI2   A0A146L8H8   A0A0A9YLQ8   B4GF84   U4U4I0   Q296F6   N6TV98   B4JHV1   B4KD91   A0A0M5IZZ9   B4LZB6   A0A182JS22   W8BU02   A0A0K8UVZ0   A0A034VJ51   B4NL26   A0A1I8M5P1   T1PDT6   A0A1Y0AWN1   A0A182M535   Q5TXE0   A0A2C9GV90   A0A182PIC3   A0A182YK80   A0A182TD45   A0A1J1ID56   A0A182Q954   A0A2M3ZF49   A0A2M3YXG8   A0A182IIF6   A0A2M3YXH5   A0A182LCN8   A7UR19   A0A182M4E3   A0A182LCP0   A0A182UGN1   A0A2M4CR16   W5JVP7   E1ZW64   A0A2C9GV83   A0A182JN28   A0A182V5N2   A0A182VQN7   A0A182J3J7   A0A084W3D0   A0A182FSH2   A0A182RHW2   A0A182IIF5   A0A1Q3FV52   T1PLE3   A0A0L0BWL3   A0A182TW57   A0A1S4GCA3   A0A2M3YYV0   A0A182V675   A0A2M3YXH2   A0A2M3ZY80   A0A182IUZ5   A0A2M3ZYG8   A0A182HL76   Q8T5I9   A0A2M4BB00   A0A2M4BCB9   A0A182WSC5   D2A527   A0A182QW38   A0A1I8NN16   A0A067QZ58   A0A034V8A2   A0A182N5V8   A0A0K8VSD2  

Pubmed

26354079    24845553    17510324    24945155    26483478    20566863    + More
26823975    25401762    17994087    23537049    15632085    24495485    25348373    25315136    28341416    12364791    14747013    17210077    25244985    20966253    20920257    23761445    20798317    24438588    26108605    12060762    18362917    19820115   

EMBL

NWSH01001068    PCG72813.1    KQ459564    KPI99652.1    PCG72815.1    KK853171    + More
KDR10319.1    AJWK01006428    CH477621    EAT38198.1    GAPW01000083    JAC13515.1    JXUM01000651    JXUM01000652    JXUM01000653    JXUM01000654    JXUM01000655    JXUM01000656    JXUM01000657    JXUM01000658    JXUM01000659    JXUM01000660    KQ560109    KXJ84476.1    GFDL01004689    JAV30356.1    DS235750    EEB16309.1    DS231976    EDS30058.1    GECZ01030739    GECZ01015000    JAS39030.1    JAS54769.1    EDS30057.1    EAT38199.1    GDHC01015659    JAQ02970.1    GBHO01013124    JAG30480.1    CH479182    EDW34269.1    KB630198    KB631707    ERL83470.1    ERL85501.1    CM000070    EAL28501.1    APGK01010025    APGK01010026    APGK01010027    APGK01053218    APGK01053219    APGK01053220    KB741223    KB738096    ENN72321.1    ENN82770.1    CH916369    EDV92859.1    CH933806    EDW14873.1    CP012526    ALC46644.1    CH940650    EDW68151.1    GAMC01013964    GAMC01013961    JAB92594.1    GDHF01026214    GDHF01021482    GDHF01008314    JAI26100.1    JAI30832.1    JAI44000.1    GAKP01016429    GAKP01016423    JAC42529.1    CH964272    EDW84229.1    KA646937    AFP61566.1    KY921816    ART29405.1    AXCM01001650    AAAB01008794    EAL42059.4    CVRI01000047    CRK98147.1    AXCN02000174    GGFM01006391    MBW27142.1    GGFM01000175    MBW20926.1    APCN01002153    GGFM01000210    MBW20961.1    EDO64829.2    GGFL01003443    MBW67621.1    ADMH02000281    ETN67130.1    GL434776    EFN74573.1    ATLV01019917    ATLV01019918    KE525285    KFB44724.1    GFDL01003571    JAV31474.1    KA649571    AFP64200.1    JRES01001238    KNC24410.1    AAAB01008987    GGFM01000684    MBW21435.1    GGFM01000216    MBW20967.1    GGFK01000205    MBW33526.1    GGFK01000189    MBW33510.1    APCN01000883    AJ439353    CAD27923.1    EAA00828.4    GGFJ01001059    MBW50200.1    GGFJ01001558    MBW50699.1    KQ971361    EFA05305.2    AXCN02001150    KDR10326.1    GAKP01021184    JAC37768.1    GDHF01010819    GDHF01004981    JAI41495.1    JAI47333.1   

Proteomes

UP000218220    UP000053268    UP000027135    UP000092461    UP000008820    UP000069940    + More
UP000249989    UP000009046    UP000002320    UP000008744    UP000030742    UP000001819    UP000019118    UP000001070    UP000009192    UP000092553    UP000008792    UP000075881    UP000007798    UP000095301    UP000075883    UP000007062    UP000075884    UP000075885    UP000076408    UP000075902    UP000183832    UP000075886    UP000075840    UP000075882    UP000000673    UP000000311    UP000075880    UP000075903    UP000075920    UP000030765    UP000069272    UP000075900    UP000037069    UP000076407    UP000007266    UP000095300   

Pfam

PF00324   AA_permease        + More
PF03522   SLC12
PF08403   AA_permease_N

Interpro

IPR018491   SLC12_C        + More
IPR004841   AA-permease/SLC12A_dom       
IPR002443   SLC12A1/SLC12A2       
IPR004842   SLC12A_fam       
IPR013612   AA_permease_N       
IPR023298   ATPase_P-typ_TM_dom_sf       

SUPFAM

SSF81665   SSF81665       

ProteinModelPortal

A0A2A4JN03   A0A194Q257   A0A2A4JL60   A0A067QMC3   A0A1B0EWP1   Q16UI3   + More
A0A1S4FNN9   A0A023EWB6   A0A182G664   A0A1Q3FSA3   E0VSF3   B0WKT5   A0A1B6EM82   B0WKT4   A0A1S4FNU9   Q16UI2   A0A146L8H8   A0A0A9YLQ8   B4GF84   U4U4I0   Q296F6   N6TV98   B4JHV1   B4KD91   A0A0M5IZZ9   B4LZB6   A0A182JS22   W8BU02   A0A0K8UVZ0   A0A034VJ51   B4NL26   A0A1I8M5P1   T1PDT6   A0A1Y0AWN1   A0A182M535   Q5TXE0   A0A2C9GV90   A0A182PIC3   A0A182YK80   A0A182TD45   A0A1J1ID56   A0A182Q954   A0A2M3ZF49   A0A2M3YXG8   A0A182IIF6   A0A2M3YXH5   A0A182LCN8   A7UR19   A0A182M4E3   A0A182LCP0   A0A182UGN1   A0A2M4CR16   W5JVP7   E1ZW64   A0A2C9GV83   A0A182JN28   A0A182V5N2   A0A182VQN7   A0A182J3J7   A0A084W3D0   A0A182FSH2   A0A182RHW2   A0A182IIF5   A0A1Q3FV52   T1PLE3   A0A0L0BWL3   A0A182TW57   A0A1S4GCA3   A0A2M3YYV0   A0A182V675   A0A2M3YXH2   A0A2M3ZY80   A0A182IUZ5   A0A2M3ZYG8   A0A182HL76   Q8T5I9   A0A2M4BB00   A0A2M4BCB9   A0A182WSC5   D2A527   A0A182QW38   A0A1I8NN16   A0A067QZ58   A0A034V8A2   A0A182N5V8   A0A0K8VSD2  

KEGG

101736988    K10951 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 | (RefSeq) bumetan

GO

GO:0055085   GO:0006811   GO:0005215   GO:0016021   GO:0015377   GO:0015379   GO:0015081   GO:1902476   GO:0035725   GO:1990573   GO:0055078   GO:0005623   GO:0015378   GO:0055075   GO:0006884   GO:0008511   GO:0055064   GO:0016020   GO:0006810   GO:0045211   GO:0005975   GO:0004553  

Length:

978

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

242.082000000001

Exp number, first 60 AAs:

0.0035

Total prob of N-in:

0.77390

inside

1  -  70

TMhelix

71  -  93

outside

94  -  102

TMhelix

103  -  125

inside

126  -  145

TMhelix

146  -  168

outside

169  -  191

TMhelix

192  -  211

inside

212  -  219

TMhelix

220  -  242

outside

243  -  275

TMhelix

276  -  298

inside

299  -  310

TMhelix

311  -  333

outside

334  -  371

TMhelix

372  -  394

inside

395  -  429

TMhelix

430  -  452

outside

453  -  456

TMhelix

457  -  476

inside

477  -  487

TMhelix

488  -  510

outside

511  -  978

 

 

Pi

180.73743

Theta

146.316978

Tajima's D

0.50412

CLR

0.477912

CSRT

0.51632418379081

Interpretation

Uncertain