Gene

KWMTBOMO12476

Pre Gene Modal

BGIBMGA001475

Annotation

PREDICTED:_uncharacterized_protein_LOC101744275_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr21(-):4620471-4634122      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.61

CDS

ATGTACAACGACGAGGAAGACAACGAGAGATATTTTAGTCCAGATTTACTTCATGTCGTTCGCATTGCCACTATTTCAAATCTTGAACTAGCTCCGTACGGGATTAGGAGTGTACCCACAAAAACTGAAGATGGAATACCGATTAGAAAGCTTTACGTTACTAACTTACCACCCAAGACAACCAGAACTGAATTGTATGGGGTATTTGCCCAATATGGTCTCATTAAAAGCTGCTGGTTGAAAATGGGAGACAAGGGGCCAAATAAAACTCCAATACCCACATATGCATTTGTAACTTTTAGTAATCCAGCAGACGCTCATCAAGCCCTTGAAGCACCTAGTCATGAAAAAATATTGAGGGGTCGAAACCTATATACGTCACCAGCAGACAGTTGGCATCAGCCAGTAGAGGATGCAGATGGTCGGGTCTGCTGGAAACCACGTTTTTCACGTACTAATGTTCGATCACGCTCTAGGTCAAAAGATTTAGATGAAGCAGGTACAAGCACCAAAATGTCCACCGTTGCCACTTTAGATTCATCAGAATCATCAGATGAAGAAGATGTGAAGAGTTGCACCATATTAGATGTATTAAATAGAGATTGTTTGACGCATATCCTAAATTATATCCCTATTAGGGACATAATATTATCTGAAAGGGTCAGTAAAGGTTGGCAGATTATGGTCCAAGAATATTTAGCAGGCGTGCGCGTGCTGAAGACGTCGTGGTGGCAGGCGGAGGCGGCTCGGCTGACGACGGCGGTGCTGCGGCGGGTGCTGGCGCGCGTAGGCGACTCGCTGCTGGCGCTGCACATCGACCACCACTGGTCGGCGCTCAACGACCGCACGGCGCACTCCATCGCCAGGTTCTGTCCCAAGCTCGAGGAGCTCAAGATCGTCGGTATGCATACAAAAAATTGGAACCCCCTTCTGTACGGATGTAAAAAACTGAAGAATTTATCATTTATTTCTTGCAACAAGCTGACGGACTCGAGCCTGGTGCATCTGGCGCACGTGGACTCCTGCATCGAGAAGATCACCGTGGCCAACAACACGCACGTGACGGGCCTGTTCCTCACCGGCGCCGCCCCGCCGCAGCTGAGCTCGCTGTCCTTCTACAACTGCTACAGCCTGCAGGGGACGGTCCTAAGCGCCGCCATGGACTCCCTACCGAACCTGACCACCTTAAAGCTGGACCTGTGTCCAGCGGCCATGTGGAAAATTGTACCCATGATCTTAAAGACCCTATCCAAACTCGAGGAGCTGTCTCTGAGCGAGTACATGTCGAGCGAGGTGTGCTTCACGACCCAGAGCAGTGATGAATTCTGTGAAGCCCTCACCGGTCTCACCGAGCTACGGAGATTGAACTTGAGCAGAAACATACACATTACTAATGCAGTGCTCAAGCAAATCGGACAAACGTGTCATAAGTTAGAGTACCTCAACGTATCAAGTTGCAATTCCAGAAAAAACTTCCCTCAACCGGGAGTGAGCGACGAAGGTCTGGCGGCGCTGTGGGCGGGGTGCCGGCGGCTGCGCGAGCTCGACGTGTCGTACCTGGCGGGGCTGGGCGGCGCCGGGCTGGCGGGACAGGGCGGCGCCGCGCGGCTGCGTCGGTTCACGGCGCGCGGCAACCCCGCGCTGTCCGCCGCCGGGCCCGCCGCGCTGCTCGCCGCCGCGCCCTGTCTGCAGGAGATGGATCTGTGCGGGTGCGACGGAGTGTCCGAAGAAATAGTGGAGGCCGCAGTGAACGCCCTGGCGCTGAACCCGCGACACCTGCTCCTGCGGCTCGCGGGCACCGGCGCCGCGCAGGCACAGGAGGAGCTGCCGAAGCACAGGCTGCTGACGGTGAACGTGGCGGACGACCTGTGCAACCCCAACATGAGGCCGGACTTCGTGGACCGCATATTCGGGAACGACTCCGACGAGTCCTTCGACGACCTCTACGACCACGACGATTTCGAGGACCTGTTCGGTTCGGACGAGGAAATATTCTTAGAGGACGAGCTAGACGAATACGAGCAGATCTTCGCGTACGGAATCGATGTCCCCGACATACTCATATAG

Protein

MYNDEEDNERYFSPDLLHVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRGRNLYTSPADSWHQPVEDADGRVCWKPRFSRTNVRSRSRSKDLDEAGTSTKMSTVATLDSSESSDEEDVKSCTILDVLNRDCLTHILNYIPIRDIILSERVSKGWQIMVQEYLAGVRVLKTSWWQAEAARLTTAVLRRVLARVGDSLLALHIDHHWSALNDRTAHSIARFCPKLEELKIVGMHTKNWNPLLYGCKKLKNLSFISCNKLTDSSLVHLAHVDSCIEKITVANNTHVTGLFLTGAAPPQLSSLSFYNCYSLQGTVLSAAMDSLPNLTTLKLDLCPAAMWKIVPMILKTLSKLEELSLSEYMSSEVCFTTQSSDEFCEALTGLTELRRLNLSRNIHITNAVLKQIGQTCHKLEYLNVSSCNSRKNFPQPGVSDEGLAALWAGCRRLRELDVSYLAGLGGAGLAGQGGAARLRRFTARGNPALSAAGPAALLAAAPCLQEMDLCGCDGVSEEIVEAAVNALALNPRHLLLRLAGTGAAQAQEELPKHRLLTVNVADDLCNPNMRPDFVDRIFGNDSDESFDDLYDHDDFEDLFGSDEEIFLEDELDEYEQIFAYGIDVPDILI

Uniprot

H9IW44   A0A2A4JL70   A0A212FL60   A0A2A4JMK9   A0A2A4JN13   A0A194Q058   + More
A0A194RPY0   A0A3S2TMA6   A0A1B6LI15   A0A1B6LUX8   A0A1B6LC54   A0A1B6MFA5   A0A1B6HBQ6   A0A1B6IBN6   A0A1B6ITP1   A0A1B6J5K8   A0A1B6F954   A0A1B6H144   A0A2J7PZU4   A0A026VWA8   A0A3L8DUR9   A0A151JYS8   F4X2G1   A0A158NW27   A0A232FAK1   A0A154PGR8   A0A195E2X0   A0A195CSP2   A0A087ZQJ4   A0A069DVE1   A0A0V0G3A9   A0A2A3E5X4   A0A224XLP0   A0A1B6CYQ3   A0A0A9ZEI6   A0A146M8R7   A0A0A9ZAM8   A0A023G8F5   K7JGG0   A0A1E1XB14   A0A1B0CDB6   L7LQ87   A0A131YWF5   V5II66   V5HWM2   A0A224YWB6   A0A131X980   A0A3M6TJT3   A0A2B4S849   T1PGM2  

Pubmed

19121390    22118469    26354079    24508170    30249741    21719571    + More
21347285    28648823    26334808    25401762    26823975    20075255    28503490    25576852    26830274    25765539    28797301    28049606    30382153   

EMBL

BABH01005893    BABH01005894    BABH01005895    BABH01005896    BABH01005897    NWSH01001068    + More
PCG72825.1    AGBW02007840    OWR54483.1    PCG72824.1    PCG72823.1    KQ459585    KPI98379.1    KQ459896    KPJ19370.1    RSAL01000055    RVE49967.1    GEBQ01016636    JAT23341.1    GEBQ01012527    JAT27450.1    GEBQ01018726    JAT21251.1    GEBQ01005340    JAT34637.1    GECU01035647    JAS72059.1    GECU01023369    JAS84337.1    GECU01017407    JAS90299.1    GECU01013248    JAS94458.1    GECZ01023078    JAS46691.1    GECZ01001402    JAS68367.1    NEVH01020332    PNF21851.1    KK107785    EZA47801.1    QOIP01000004    RLU24121.1    KQ981477    KYN41465.1    GL888578    EGI59386.1    ADTU01027780    NNAY01000522    OXU27874.1    KQ434900    KZC11051.1    KQ979701    KYN19493.1    KQ977329    KYN03547.1    GBGD01000831    JAC88058.1    GECL01003537    JAP02587.1    KZ288386    PBC26461.1    GFTR01007485    JAW08941.1    GEDC01018780    JAS18518.1    GBHO01001283    JAG42321.1    GDHC01003463    JAQ15166.1    GBHO01001282    GBRD01002119    GDHC01002606    JAG42322.1    JAG63702.1    JAQ16023.1    GBBM01006218    JAC29200.1    GFAC01002760    JAT96428.1    AJWK01007642    GACK01011219    JAA53815.1    GEDV01005579    JAP82978.1    GANP01003722    JAB80746.1    GANP01003721    JAB80747.1    GFPF01007118    MAA18264.1    GEFH01004487    JAP64094.1    RCHS01003465    RMX41645.1    LSMT01000169    PFX24702.1    KA647008    AFP61637.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000283053    + More
UP000235965    UP000053097    UP000279307    UP000078541    UP000007755    UP000005205    UP000215335    UP000076502    UP000078492    UP000078542    UP000005203    UP000242457    UP000002358    UP000092461    UP000275408    UP000225706   

PRIDE

H9IW44    L7LQ87    V5II66    V5HWM2   

Pfam

PF00646   F-box        + More
PF00076   RRM_1
PF12937   F-box-like
PF13516   LRR_6
PF00560   LRR_1

Interpro

IPR006553   Leu-rich_rpt_Cys-con_subtyp        + More
IPR036047   F-box-like_dom_sf       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       
IPR032675   LRR_dom_sf       
IPR035979   RBD_domain_sf       
IPR001810   F-box_dom       
IPR001611   Leu-rich_rpt       

SUPFAM

SSF81383   SSF81383        + More
SSF54928   SSF54928       

Gene 3D

3.30.70.330     3.80.10.10    

ProteinModelPortal

H9IW44   A0A2A4JL70   A0A212FL60   A0A2A4JMK9   A0A2A4JN13   A0A194Q058   + More
A0A194RPY0   A0A3S2TMA6   A0A1B6LI15   A0A1B6LUX8   A0A1B6LC54   A0A1B6MFA5   A0A1B6HBQ6   A0A1B6IBN6   A0A1B6ITP1   A0A1B6J5K8   A0A1B6F954   A0A1B6H144   A0A2J7PZU4   A0A026VWA8   A0A3L8DUR9   A0A151JYS8   F4X2G1   A0A158NW27   A0A232FAK1   A0A154PGR8   A0A195E2X0   A0A195CSP2   A0A087ZQJ4   A0A069DVE1   A0A0V0G3A9   A0A2A3E5X4   A0A224XLP0   A0A1B6CYQ3   A0A0A9ZEI6   A0A146M8R7   A0A0A9ZAM8   A0A023G8F5   K7JGG0   A0A1E1XB14   A0A1B0CDB6   L7LQ87   A0A131YWF5   V5II66   V5HWM2   A0A224YWB6   A0A131X980   A0A3M6TJT3   A0A2B4S849   T1PGM2  

PDB

1X4A     E-value=0.000701398,     Score=104

KEGG

101744275    no KO assigned | (RefSeq) uncharacterized LOC101744275

GO

GO:0003723   GO:0016874   GO:0003676   GO:0000166   GO:0005515   GO:0016491   GO:0015934   GO:0005216   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Length:

688

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11198

Exp number, first 60 AAs:

0.01082

Total prob of N-in:

0.00216

outside

1  -  688

 

 

Pi

174.924885

Theta

179.054371

Tajima's D

-1.365482

CLR

143.701509

CSRT

0.0826458677066147

Interpretation

Uncertain