Gene

KWMTBOMO12475

Pre Gene Modal

BGIBMGA001476

Annotation

PREDICTED:_2-oxoglutarate_and_iron-dependent_oxygenase_domain-containing_protein_3-like_[Papilio_polytes]

Location

Bomo_Chr21(-):4598341-4605522      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.599 Mitochondrial   Reliability : 1.17

CDS

ATGAGTGAAACAAGAAAAAGAAAGACAAAAAACATTCCAAATAACAGTATTAGTGATAAAGATAAAACCAAAGAAGGTGAAACCAAGACAGTATCCCCAAAAAGCAATATTCCCCTAAGAGTACTCTCTCGTGCAGTAGTAATATTTTCACTACTTATTATAGTTTATTTTACGTCAAACGATGGAGCTTTTAAGATATTTGCCAAACAAAATGAAGTAATATCTGGTAAGGGCCAGATAGTTGAATGTTCATCTGCGTATCTGAGGGAAATTGATAAATTCGAAGGATGTTTCCCGAAGCAGTGCAAGAGGTTCGTCACTGATAAAGTTATTACAGATAAAGAAGTCGACGAACTACTCATGATTGCAAAAAAGGGTCTAAAATATGGAGGTTCCTCTGGGGGAGCCTCTATTCTTGATCTGCACAGTGGGGCTTTGTCAATGGGACAACATTTCATCAATTTTTATAAAAGATCCGAGGGAAAAAATGTATTCACAGAAAAGGATTTTACAACTTACAAAGTTGTCAAAAACAAAATAAAGTATTCTATAGGGCATTATTTCGGAGTTAACCCAGAAAAAATATATTTGACACATCCAACTTTTTTCTCAGAGATAACATCAAAGGAAGCTGTAACAGTTCATGATGAATACTGGCATCCTCATGTGGATAAAGAAACCTACAAATCGTTCCACTATACCACGCTTTTATACTTAACTGACTACAATATTGACTTTAAAGGTGGAAGGTTTGTGTTCATTGACGAAAAATATAACAGAACTATCGAACCCAGGAAAGGACGCGTCAGCATGTTCACTAGCGGCAAAGAAAATTTACACTATGTTGAAAAAGTAACGTCCGGGACTCGTTACGCCGTAACAATATCATTTACGTGTGACAAGCAATACGCTATTGGTGATCCTGATAAACGCAAATTCAATAATGATTTATAA

Protein

MSETRKRKTKNIPNNSISDKDKTKEGETKTVSPKSNIPLRVLSRAVVIFSLLIIVYFTSNDGAFKIFAKQNEVISGKGQIVECSSAYLREIDKFEGCFPKQCKRFVTDKVITDKEVDELLMIAKKGLKYGGSSGGASILDLHSGALSMGQHFINFYKRSEGKNVFTEKDFTTYKVVKNKIKYSIGHYFGVNPEKIYLTHPTFFSEITSKEAVTVHDEYWHPHVDKETYKSFHYTTLLYLTDYNIDFKGGRFVFIDEKYNRTIEPRKGRVSMFTSGKENLHYVEKVTSGTRYAVTISFTCDKQYAIGDPDKRKFNNDL

Uniprot

H9IW45   A0A2A4JN34   A0A2H1W8T1   A0A194PZA8   A0A194RPN7   A0A212FL66   + More
A0A1E1W378   A0A3S2N8F4   A0A067QVZ2   A0A2J7PLT6   A0A1B6FBI5   A0A1B6L1V1   A0A2P8XDN2   K7IM27   A0A232F3F8   A0A151I5N1   A0A026WWW0   A0A0L7QNB2   F4X256   A0A151X562   A0A195DQM5   A0A0N0BFT3   A0A0P4WD18   A0A088ANZ4   W5JBP3   A0A2L2YIG0   E2BPK8   Q17M17   A0A1S4EY18   D6W6D1   A0A2M4ASV3   A0A2M4ATE6   A0A182GGG5   A0A2A3ERW9   A0A3R7MLR8   A0A1Q3FD65   A0A182TDK7   A0A195EWF9   Q5TNC1   A0A1S4H0A6   A0A087SV31   A0A182I566   A0A182KUF4   A0A084VMX2   A0A182UV43   A0A182JI05   B0WEB4   A0A182QJZ8   A0A182MU16   A0A182PFR8   A0A182JUV4   A0A182NF50   A0A182Y9S5   A0A0N8AZT0   A0A0P5QIR9   A0A0P6E8T5   A0A0P5YX44   A0A0P5FUX7   A0A0P5B3S8   A0A0P5B3L9   T1ISY3   A0A1Y1ND90   E9FU94   A0A1I8MB99   A0A1S3J2H4   A0A1S3J2I1   A0A131YL18   A0A023EWN2   T1HNY9   A0A0P4W008   A0A182R6I8   A0A182WH70   W4Y5E1   A0A224YWF2   A0A1W4XTA3   A0A182SB87   A0A182WYK5   A0A023GCC1   A0A069DYL8   A0A0P5H7Y1   A0A0V0G8K7   A0A224XFZ8   V9L265   A0A0P4WGF6   A0A093J257   A0A1E1X2C9   B3DIJ1   A0A2R8QH86   A0A2I3GMW1   H9GWB9   A0A1A9WES7   A0A2K5P6L0   A0A2J8XZL9   A0A0D9S4X7   A0A2K5R0V5   A0A2K5WE07   F6QPC2   A0A2K6QV12   A0A2K6KDK6   A0A1E1XRC4  

Pubmed

19121390    26354079    22118469    24845553    29403074    20075255    + More
28648823    24508170    30249741    21719571    20920257    23761445    26561354    20798317    17510324    18362917    19820115    26483478    12364791    20966253    24438588    25244985    28004739    21292972    25315136    26830274    25474469    27129103    28797301    26334808    24402279    28503490    23594743    16341006    25319552    25362486    29209593   

EMBL

BABH01005889    BABH01005890    NWSH01001068    PCG72822.1    ODYU01007046    SOQ49478.1    + More
KQ459585    KPI98378.1    KQ459896    KPJ19369.1    AGBW02007840    OWR54484.1    GDQN01009640    JAT81414.1    RSAL01001043    RVE40972.1    KK852879    KDR14448.1    NEVH01024423    PNF17296.1    GECZ01022163    JAS47606.1    GEBQ01022331    JAT17646.1    PYGN01002665    PSN30117.1    NNAY01001061    OXU25294.1    KQ976413    KYM90404.1    KK107077    QOIP01000010    EZA60542.1    RLU17350.1    KQ414860    KOC60059.1    GL888565    EGI59472.1    KQ982519    KYQ55542.1    KQ980612    KYN15122.1    KQ435796    KOX73548.1    GDRN01049383    GDRN01049381    JAI66562.1    ADMH02001861    ETN60823.1    IAAA01020448    IAAA01020449    LAA07918.1    GL449633    EFN82412.1    CH477209    EAT47727.1    KQ971319    EFA11383.2    GGFK01010540    MBW43861.1    GGFK01010732    MBW44053.1    JXUM01059549    JXUM01061740    KQ562166    KQ562059    KXJ76528.1    KXJ76789.1    KZ288193    PBC34022.1    QCYY01001139    ROT80232.1    GFDL01009613    JAV25432.1    KQ981954    KYN32227.1    AAAB01008984    EAL39061.2    KK112090    KFM56720.1    APCN01003790    ATLV01014632    KE524975    KFB39316.1    DS231907    EDS45474.1    AXCN02000829    AXCM01004007    GDIQ01226819    JAK24906.1    GDIQ01113554    JAL38172.1    GDIQ01066222    JAN28515.1    GDIP01065362    LRGB01001764    JAM38353.1    KZS10576.1    GDIQ01251210    JAK00515.1    GDIP01190132    JAJ33270.1    GDIP01190133    JAJ33269.1    JH431449    GEZM01006960    GEZM01006958    JAV95528.1    GL732524    EFX89506.1    GEDV01009417    JAP79140.1    GBBI01004967    JAC13745.1    ACPB03013515    GDKW01001487    JAI55108.1    AAGJ04104479    AAGJ04104480    AAGJ04104481    GFPF01010802    MAA21948.1    GBBM01003924    JAC31494.1    GBGD01002165    JAC86724.1    GDIQ01253904    JAJ97820.1    GECL01001633    JAP04491.1    GFTR01005031    JAW11395.1    JW872838    AFP05356.1    GDRN01049382    JAI66561.1    KL205697    KFV73079.1    GFAC01005794    JAT93394.1    BC163145    BC163149    AAI63145.1    CR391936    LO017791    ADFV01117470    ADFV01117471    ADFV01117472    ADFV01117473    NDHI03003285    PNJ87438.1    AQIB01145153    AQIB01145154    AQIB01145155    AQIA01029055    AQIA01029056    AQIA01029057    JU336408    JV044917    AFE80161.1    AFI34988.1    GFAA01001572    JAU01863.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000027135    UP000235965    UP000245037    UP000002358    UP000215335    UP000078540    UP000053097    UP000279307    UP000053825    UP000007755    UP000075809    UP000078492    UP000053105    UP000005203    UP000000673    UP000008237    UP000008820    UP000007266    UP000069940    UP000249989    UP000242457    UP000283509    UP000075902    UP000078541    UP000007062    UP000054359    UP000075840    UP000075882    UP000030765    UP000075903    UP000075880    UP000002320    UP000075886    UP000075883    UP000075885    UP000075881    UP000075884    UP000076408    UP000076858    UP000000305    UP000095301    UP000085678    UP000015103    UP000075900    UP000075920    UP000007110    UP000192223    UP000075901    UP000076407    UP000053584    UP000000437    UP000001073    UP000002254    UP000091820    UP000233060    UP000029965    UP000233040    UP000233100    UP000233200    UP000233180   

PRIDE

H9IW45   

Pfam

PF13640   2OG-FeII_Oxy_3        + More
PF08240   ADH_N
PF00076   RRM_1

Interpro

IPR039210   OGFOD3        + More
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR006620   Pro_4_hyd_alph       
IPR013154   ADH_N       
IPR020843   PKS_ER       
IPR037397   RTN4I1       
IPR036291   NAD(P)-bd_dom_sf       
IPR011032   GroES-like_sf       
IPR035979   RBD_domain_sf       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF50129   SSF50129       
SSF54928   SSF54928       

Gene 3D

3.30.70.330    

CDD

cd08248  RTN4I1

ProteinModelPortal

H9IW45   A0A2A4JN34   A0A2H1W8T1   A0A194PZA8   A0A194RPN7   A0A212FL66   + More
A0A1E1W378   A0A3S2N8F4   A0A067QVZ2   A0A2J7PLT6   A0A1B6FBI5   A0A1B6L1V1   A0A2P8XDN2   K7IM27   A0A232F3F8   A0A151I5N1   A0A026WWW0   A0A0L7QNB2   F4X256   A0A151X562   A0A195DQM5   A0A0N0BFT3   A0A0P4WD18   A0A088ANZ4   W5JBP3   A0A2L2YIG0   E2BPK8   Q17M17   A0A1S4EY18   D6W6D1   A0A2M4ASV3   A0A2M4ATE6   A0A182GGG5   A0A2A3ERW9   A0A3R7MLR8   A0A1Q3FD65   A0A182TDK7   A0A195EWF9   Q5TNC1   A0A1S4H0A6   A0A087SV31   A0A182I566   A0A182KUF4   A0A084VMX2   A0A182UV43   A0A182JI05   B0WEB4   A0A182QJZ8   A0A182MU16   A0A182PFR8   A0A182JUV4   A0A182NF50   A0A182Y9S5   A0A0N8AZT0   A0A0P5QIR9   A0A0P6E8T5   A0A0P5YX44   A0A0P5FUX7   A0A0P5B3S8   A0A0P5B3L9   T1ISY3   A0A1Y1ND90   E9FU94   A0A1I8MB99   A0A1S3J2H4   A0A1S3J2I1   A0A131YL18   A0A023EWN2   T1HNY9   A0A0P4W008   A0A182R6I8   A0A182WH70   W4Y5E1   A0A224YWF2   A0A1W4XTA3   A0A182SB87   A0A182WYK5   A0A023GCC1   A0A069DYL8   A0A0P5H7Y1   A0A0V0G8K7   A0A224XFZ8   V9L265   A0A0P4WGF6   A0A093J257   A0A1E1X2C9   B3DIJ1   A0A2R8QH86   A0A2I3GMW1   H9GWB9   A0A1A9WES7   A0A2K5P6L0   A0A2J8XZL9   A0A0D9S4X7   A0A2K5R0V5   A0A2K5WE07   F6QPC2   A0A2K6QV12   A0A2K6KDK6   A0A1E1XRC4  

KEGG

101736724    no KO assigned | (RefSeq) 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3-li

GO

GO:0031418   GO:0016021   GO:0016705   GO:0005506   GO:0005739   GO:0003723   GO:0016491   GO:0015934   GO:0005216   GO:0045211   GO:0005975   GO:0004553   GO:0055114  

PANTHER

PTHR14650  

Length:

317

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.08455

Exp number, first 60 AAs:

19.53662

Total prob of N-in:

0.98847

POSSIBLE N-term signal

sequence

inside

1  -  40

TMhelix

41  -  58

outside

59  -  317

 

 

Pi

40.288911

Theta

138.589493

Tajima's D

-0.448216

CLR

1.437771

CSRT

0.252787360631968

Interpretation

Uncertain