Gene

KWMTBOMO12473  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001495

Annotation

PREDICTED:_ubiquitin-like_protein_7_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr21(+):4583993-4591842      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.198

CDS

ATGGATAACCAGCCATGCATATTTTTGGGTATAAAAGTGAAACCTGGACCAATAGAACGTCACAAACTAGAGAATTTTGGACTCGAGAATACAGTAGATTCTCTTAGAACTGAGGCTGAAAAGCGATCCAACGTACCATCATCGTCATTAGAATTAATTCACCACGGAAAAATCTTAAAAGACAAGGCAACACTTCAAGAATGTGGAGTCAAGTCTGGTGAAATGGTGCATGTTGTGAAAAAGAAGACTACCACTGCCAGTGCAGCACCTCCAACTTACACTGATGCTGAGCTGCAGCAGTTAAATGCATCACTGAGAACTCTTGGATGTACACCAAATGCACCAGGTTGGACTAGAGCTATGCAGCTCTTAAATGATGACTCTGTTATGGCTGAGATCATAGAACAGGCCCCATCACTAGGAGAGGATTGTGTAGCTCTTTCAATATTGCACGAGGTTGAGTTATTGGCAGCTCTGGGTGCCAATCTACAAACAATGAGGCGGGGTGCCACAGCCCATCCAGAATTGCCCATAGCATTGAGACACCTCACAAATCTTGTTAGATCACGCTCTTCAACCGGATCTACTCCTGGTGATACTGCACCCACATCTGGATTTGCATATTCATTGGAGGCTTTGTCTGAAGATGAAGATGGTGAAGATGAGGAGACTGATGAAAATGGTGAAAGAAACCAAATAACTCAAGAACAGTTAGCAGCAGCATTGCAGGCGGCCACGGAAGCCGTGTCGACTCCGCGGAGCGGCGGCGGCAGTCACGAGAGCCTGCTGCGGTTGCTGCACGCCGGCGACTCCTCCCGACCGCACTCCTCCACGCAGACCTCAGGCCCCAGTCGCTCGGTTATCACTCCGGAAATGTTCAGTGAAGCTATTTCAGAAGCTATAAACAGATCCAGCAATAGACAAAGTGATGGAACACCTATGGAACAAAGTACTGCAGCATCTTCATCTCAAAGTCCCGGAGGAAGGGAAGATAATTTTACAACACAATTGAACCATATGCATGAAATGGGTCTACTGGACGACGCCCTAAATGTTCGCGCCCTACTAATATGCTCCGGTGACGTGAATGCAGCTATTAATTTAGTTTTTAGTGGCGCCATCGGAGATGAATAA

Protein

MDNQPCIFLGIKVKPGPIERHKLENFGLENTVDSLRTEAEKRSNVPSSSLELIHHGKILKDKATLQECGVKSGEMVHVVKKKTTTASAAPPTYTDAELQQLNASLRTLGCTPNAPGWTRAMQLLNDDSVMAEIIEQAPSLGEDCVALSILHEVELLAALGANLQTMRRGATAHPELPIALRHLTNLVRSRSSTGSTPGDTAPTSGFAYSLEALSEDEDGEDEETDENGERNQITQEQLAAALQAATEAVSTPRSGGGSHESLLRLLHAGDSSRPHSSTQTSGPSRSVITPEMFSEAISEAINRSSNRQSDGTPMEQSTAASSSQSPGGREDNFTTQLNHMHEMGLLDDALNVRALLICSGDVNAAINLVFSGAIGDE

Uniprot

H9IW64   A0A2H1W957   A0A2A4JN42   A0A194PYG3   A0A194RPD0   A0A212FL75   + More
S4PIP0   A0A067R792   A0A1Y1NAP3   A0A0A9YLF5   A0A1W4X180   A0A0T6B6V8   E0VJF2   A0A195FXP0   D6W9J9   A0A195DS17   A0A195BS84   A0A158NVA5   F4X2L0   A0A154PEM4   A0A026W966   A0A151IBE2   A0A151WU32   V5G9F3   B0WFI3   A0A0N0BDD9   K7IME5   A0A0J7L6P0   A0A1Q3F451   A0A232FD72   A0A182GX56   Q16N61   U5ES39   A0A1E1XL41   A0A210QBP9   T1J358   A0A164LKQ3   A0A0P5HLD2   A0A0P6B2B4   A0A1S3HUN9   A0A0P5C4A0   A0A0P5WJ50   A0A0P4YJC4   A0A1S3HDQ1  

Pubmed

19121390    26354079    22118469    23622113    24845553    28004739    + More
25401762    26823975    20566863    18362917    19820115    21347285    21719571    24508170    30249741    20075255    28648823    26483478    17510324    29209593    28812685    26383154   

EMBL

BABH01005889    ODYU01007046    SOQ49476.1    NWSH01001068    PCG72820.1    KQ459585    + More
KPI98376.1    KQ459896    KPJ19367.1    AGBW02007840    OWR54486.1    GAIX01000129    JAA92431.1    KK852693    KDR18317.1    GEZM01011984    JAV93316.1    GBHO01011671    GBHO01011668    GBRD01007471    GDHC01012104    GDHC01001435    JAG31933.1    JAG31936.1    JAG58350.1    JAQ06525.1    JAQ17194.1    LJIG01009479    KRT82997.1    DS235222    EEB13508.1    KQ981193    KYN45203.1    KQ971312    EEZ98142.1    KQ980530    KYN15607.1    KQ976417    KYM89880.1    ADTU01027051    GL888584    EGI59335.1    KQ434889    KZC10309.1    KK107324    QOIP01000006    EZA52533.1    RLU21507.1    KQ978106    KYM96975.1    KQ982745    KYQ51344.1    GALX01001696    JAB66770.1    DS231918    EDS26251.1    KQ435878    KOX69964.1    LBMM01000512    KMQ98174.1    GFDL01012728    JAV22317.1    NNAY01000431    OXU28443.1    JXUM01019912    KQ560558    KXJ81898.1    CH477837    EAT35781.1    GANO01002536    JAB57335.1    GFAA01003374    JAU00061.1    NEDP02004255    OWF46156.1    JH431820    LRGB01003123    KZS04207.1    GDIQ01227863    JAK23862.1    GDIP01147856    GDIP01023136    JAM80579.1    GDIP01180453    JAJ42949.1    GDIP01085601    JAM18114.1    GDIP01227943    JAI95458.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000027135    + More
UP000192223    UP000009046    UP000078541    UP000007266    UP000078492    UP000078540    UP000005205    UP000007755    UP000076502    UP000053097    UP000279307    UP000078542    UP000075809    UP000002320    UP000053105    UP000002358    UP000036403    UP000215335    UP000069940    UP000249989    UP000008820    UP000242188    UP000076858    UP000085678   

PRIDE

H9IW64   

Pfam

PF00240   ubiquitin        + More
PF00627   UBA

Interpro

IPR029071   Ubiquitin-like_domsf        + More
IPR015496   Ubiquilin       
IPR000626   Ubiquitin_dom       
IPR015940   UBA       
IPR009060   UBA-like_sf       
IPR022272   Lipocalin_CS       
IPR006636   STI1_HS-bd       

SUPFAM

SSF54236   SSF54236        + More
SSF46934   SSF46934       

ProteinModelPortal

H9IW64   A0A2H1W957   A0A2A4JN42   A0A194PYG3   A0A194RPD0   A0A212FL75   + More
S4PIP0   A0A067R792   A0A1Y1NAP3   A0A0A9YLF5   A0A1W4X180   A0A0T6B6V8   E0VJF2   A0A195FXP0   D6W9J9   A0A195DS17   A0A195BS84   A0A158NVA5   F4X2L0   A0A154PEM4   A0A026W966   A0A151IBE2   A0A151WU32   V5G9F3   B0WFI3   A0A0N0BDD9   K7IME5   A0A0J7L6P0   A0A1Q3F451   A0A232FD72   A0A182GX56   Q16N61   U5ES39   A0A1E1XL41   A0A210QBP9   T1J358   A0A164LKQ3   A0A0P5HLD2   A0A0P6B2B4   A0A1S3HUN9   A0A0P5C4A0   A0A0P5WJ50   A0A0P4YJC4   A0A1S3HDQ1  

PDB

2DEN     E-value=0.00527421,     Score=94

KEGG

101743744    no KO assigned | (RefSeq) ubiquitin-like protein 7

GO

GO:0006511   GO:0031593   GO:0005829   GO:0005515   GO:0005622   GO:0005840   GO:0006412   GO:0015934   GO:0005216   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR10677  

Length:

377

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15963

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00366

outside

1  -  377

 

 

Pi

132.463154

Theta

162.820525

Tajima's D

-0.921126

CLR

0.156084

CSRT

0.148892555372231

Interpretation

Uncertain