Silkworm Genome Informatics Database

Gene

KWMTBOMO12465

Pre Gene Modal

BGIBMGA001480

Annotation

insect_intestinal_mucin_precursor_[Bombyx_mori]

Location

Bomo_Chr21(-):4508760-4510732 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.384

CDS

ATGAGAGGATTAATATTGATATTGGCAGCAGTTGCTTTGGCGCGGGCCGAAAACCTGTGTCCACCTGAACAATCTGAGAACTGGGAAATAGAATTACTTTTGCCTCACCCGCAATGCAACAAATTTTACAAATGCACCTTCGGCCAACCGGTCGAGATGGTGTGCTATGGGAATTTGTACTTCAATCTTAAAACTTGGCAGTGCGACTGGCCCGAAAACGTCGAATGTGGTGACAGGATAGACCCAGCTGATACGACTACAGCGTCACCTACACCTACAACTCTTGTTCCTGAAACGACGACAAATCGCGAAACTGAAGCTCCCATAACAACTCCAATACCAACAACTACTGAGACAACTACAGCTGAAGTTACGACAACCACAACACAAGCTCCTACAACTCCTACTTTAGCTCCTACAACTACAACTGAAGTTCCGACAACCACAACACAAGCTCCTACAACTACTACTTTAGCTCCTACAACTACAACTGAAGTTCCGACGACCACAACACAAGCTCCTACAACTACCCAGGAACCGGATACTGAGCCTCCAACTACGACGGCTGCGCCAACGGTAGCTCCCACGCCGGAACCTGAACCAGAAAAACCCGAAATTGATTTCCTTGAAAATGGTTGCCCAGTTAACCCTCATATTCACTGGCTACTGCCCCATGAAGGAAACTGCAATCTATTCTATTATTGTGTTTGGGGAAGAAAAGTCTTGAGACATTGCCCTAGCACATTACACTTCAACAAAGTCATCCAGGTTTGCGACTGGCCTTGGGACGCAGGCTGTGCATCATCTTTCGACAAGAACGCCGTGGCCAGGAGAATGATTAGTGAAGTCGAAGTATCCGTCAATCTGTAA

Protein

MRGLILILAAVALARAENLCPPEQSENWEIELLLPHPQCNKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVECGDRIDPADTTTASPTPTTLVPETTTNRETEAPITTPIPTTTETTTAEVTTTTTQAPTTPTLAPTTTTEVPTTTTQAPTTTTLAPTTTTEVPTTTTQAPTTTQEPDTEPPTTTAAPTVAPTPEPEPEKPEIDFLENGCPVNPHIHWLLPHEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCASSFDKNAVARRMISEVEVSVNL

Uniprot

G1FU07

Pubmed

19121390

EMBL

BABH01005884 JN256080 AEM36337.1

Proteomes

UP000005204

PRIDE

G1FU07

Pfam

PF01607 CBM_14

Interpro

IPR036508 Chitin-bd_dom_sf + More
IPR002557 Chitin-bd_dom

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

G1FU07

PDB

6G9E E-value=1.55367e-05, Score=114

KEGG

100862783 no KO assigned | (RefSeq) IIM1; insect intestinal mucin

GO

GO:0006030 GO:0005576 GO:0008061 GO:0006412 GO:0015934 GO:0005216 GO:0016021 GO:0045211 GO:0005975 GO:0004553

SignalP

Position: 1 - 16, Likelihood: 0.999849

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00157

Exp number, first 60 AAs:

0.00063

Total prob of N-in:

0.00646

outside

1 - 289

Pi

185.590846

Theta

171.477731

Tajima's D

0.518321

CLR

0.010483

CSRT

0.526423678816059

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics