SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12463  Validated by peptides from experiments
Annotation
peritrophin_1_[Mamestra_configurata]
Location
Bomo_Chr21(+):4481883-4489382      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.499
 

Sequence

CDS
ATGAAAGGTACATTGCTCACATTGCTCTGTGCAATATTCTTTGCACAGGGGCGTGAGTTTTTAGGTAGCGATGGCAGATTAGTATGCAACTGCGATCCCGAAGAAGCAAACAACATTTGCAGTGCATTAGGCTCTGCAAATCTGCACGTAGCGCACGAACGTTGTGACAAATTCTACAAATGCGCCAATAGAAAGCCTGTTCCATTTTGTTGTTCTGAAGGACTCTTCTACAATCCGGTCATCGAAGTGTGCGATTGGCCTCACAACGTTGATTGTGGAAATAGAATAACAAATCAAGTCCACAATCGCACCGAATGTAACGACAATGAAGGCGATTGGGAAGGTGAAGACAACGGCAATGAAAATGAAAACACTTGCGACTGGGCCCCTAGTGATGCGCCATCACTTTGTGCCCTCCCAGCTAATAATGGTGGTCTCGTTCCGCACGAAAATTGCAATCAATTTTATCAGTGTGCGCACGGAAGGCCAGTGGCACAAACTTGTGCCGGCAATCTTCTATTCGATACTTGCGCTAGGCGTTGTGATTACCCTCACAATGTAAAGTGCGGAAACCGGGCTATCCCTGAAAAGGATGAAAACCCTGGTAACAATGAGAGTAAGGAAAGCGATGACAATGAGCAGACTTGTAATTGCGATCCAGCGGAGGCACCAGAGATTTGTGCGCGACCTGGGTCTGATAGTATTCTCATAGCTCATGAAATTTGCCATAAATATTACATTTGTCTTCACGGTCGTCCAAGGACTATGGTTTGTAATAACAATCTTTTATTTAACCCTTATACAAACCAATGTGATTGGCCGCATAATGTTGAATGTGGTGACAGACTACTTTGTAATTGCGAAGATGGAAATAACGATAAAGAATGTGATGAAACTAAAAGTGAGGAAAGTAGCCCTGGCGATGATGGATCTGGCGGTGGCGGAGGTGGAGGTGGTGGTGGCGGCGGAAGTGAAGGTGGAGAAGGTGGCGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGCGGTGGAGGAGGCGGAGGTGGAGGTGGTGGTGGCGGAGATGGCTCTTGCAACTGCAACCCTGGTGAAGCTCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGTGGAGGAGGAGGCGGCGGCGGTGGCGGCGGCGGAGGCGGCGGTGGTGGCGGAAGTGAAGGTGGGGAAGGCGGTGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCCCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATAGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGTGGAGGAGGAGGCGGTGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGTGGCGGCGGTGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCTCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATAGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGACCCGCATCTAGAAAGATGTGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGCGGCGGTGGAGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGTGGTGGTGGCGGAAGTGAAGGTGGAGAAGGCGGCGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGTGGAGGTGGTGGCGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCTCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATATATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGTGGAGGAGGAGGCGGTGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGAAGTGAAGGTGGAGAAGGCGGCGGTGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGTGGAGGTGGAGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCCCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCACATCTGGAAAGATGTGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGCGGCGGTGGAGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGTGGTGGTGGCGGAAGTGAAGGTGGAGAAGGCGGCGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGTGGAGGTGGTGGCGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCCCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGCGGCGGTGGAGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGTGGTGGTGGCGGAAGTGAAGGTGGAGAAGGCGGCGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGTGGAGGTGGTGGCGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCTCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATATATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGTGGAGGAGGAGGCGGTGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGAAGTGAAGGTGGAGAAGGCGGCGGTGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGTGGAGGTGGAGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCCCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATAGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGATCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTCGATTGTGGAGACAGAATAATTCCCGATCCAGAAGACGGAGGCAATGGTGGCGATGAGGGATCTGGTGGTGGAGGAGGAGGCGGCGGCGGTGGCGGCGGTGGTGGTGGCGGAGGCGGCGGTGGAGGTGGTAGTGGCGGTGGAGGTGAAGGTGGAGAAGGCGGTGGCGGTGGAGGCGGTGGTGGTGGTGGCGGCGGAGGCGGAGGTGGAGGTGGTGGTGGCGGAGGTGGCTCTTGCAACTGCAACCCTGGTGAAGCTCCAAGTATTTGCGCTGCCGACGGCTCTGATGGTGTTTTAATCGCTCACGAATATTGCAATAAGTTCTATAAATGTGACCATGGACTACCAGTAGCATTGAAGTGCCCAGGAAATCTACTTTATGACCCGCATCTAGAAAGATGCGAATGGCCTGATACTGTTGATTGCGGAGACAGAATAATACCTGATTGCAATGAAGAAGACGGCAGTGGAGGTGGAGGCAGTGGCGGTGGCGGCGGAGGTGGTGAAGGCTCTTGCAAATGCAACCCCAGTGAAGCCCCAAGTATTTGTGCTGCTGAAGGATCTGACAGTATTCTAATAGCACATGAACATTGCAATAAGTTCTATAAATGTTTCAATAAGCGACCGGTTCCATTAAATTGCCCTGAAGACCTTCTTTATGATCCACATTTAGAAAGATGCGAATGGCCTGGTACTGTTGAATGTGGAGATAGAATAATTCCTGATAAGAGTGATGATCTTAACTTTTGTATTACAATAGAACCGAATGATGTTAACAACAACACCAACACTAGCCCCAGTGAAGTAAAAGCTATTTGTGCAAGAGGTAATTCAGAAGGCACGTTCATTCCTCATGAAAATTGCAATCAATTCTATACGTGCTCCAATGCTATTCCCGTTACTTTGACTTGTCCGAGCACTCTACTCTATAACTTGCTTACCGAAAAATGTGATTGGCCACGCTACGTTGATTGTGGAGATAGAAAGCTCCAGGGAGACAACGGTAACGGAAACAACAAAGACGAAGATACAACAGCTGTGATCTGCTCGAAAAAAGAATCCGAAGGAGTTTTAGTGGCTCACGAAGACTGCGATAAATTTTACATGTGCTCATCTGGAAATCCCGTAACTCTTAAATGTCCTTCGAACTTATTCTTTAGCCCAATCACCCAAACTTGTGAATGGTCCAAGAATGTCGAATGTGGCACTAGAGTCGTTCCAGGTGAGGAAAACGTCAATACTGGTCCTTGTAACTGTGATCCGAAACAGGCATTATCTTTATGTGCTCAAGAAGGTTCGAACGGCAAACTTGTAGCCCATAATGTGTGTAGCCACTATCACATGTGCGTCAGCGGTAAAACATTATCACTCGCTTGTCCGTCTAATCTTTTCTATGATCCTCAAAAGGAACGATGCGATTTTCCTGCTAATGTCAGCTGCGAAGGCCGTGTTGCACCAGTGTTCCTACCCCCACTCAACAAACATTTGGAAGCACGACAAAACATCAGACACTACTTTTAA
Protein
MKGTLLTLLCAIFFAQGREFLGSDGRLVCNCDPEEANNICSALGSANLHVAHERCDKFYKCANRKPVPFCCSEGLFYNPVIEVCDWPHNVDCGNRITNQVHNRTECNDNEGDWEGEDNGNENENTCDWAPSDAPSLCALPANNGGLVPHENCNQFYQCAHGRPVAQTCAGNLLFDTCARRCDYPHNVKCGNRAIPEKDENPGNNESKESDDNEQTCNCDPAEAPEICARPGSDSILIAHEICHKYYICLHGRPRTMVCNNNLLFNPYTNQCDWPHNVECGDRLLCNCEDGNNDKECDETKSEESSPGDDGSGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGGGGDGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYICDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYICDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGSEGGEGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDPEDGGNGGDEGSGGGGGGGGGGGGGGGGGGGGGGSGGGGEGGEGGGGGGGGGGGGGGGGGGGGGGGGSCNCNPGEAPSICAADGSDGVLIAHEYCNKFYKCDHGLPVALKCPGNLLYDPHLERCEWPDTVDCGDRIIPDCNEEDGSGGGGSGGGGGGGEGSCKCNPSEAPSICAAEGSDSILIAHEHCNKFYKCFNKRPVPLNCPEDLLYDPHLERCEWPGTVECGDRIIPDKSDDLNFCITIEPNDVNNNTNTSPSEVKAICARGNSEGTFIPHENCNQFYTCSNAIPVTLTCPSTLLYNLLTEKCDWPRYVDCGDRKLQGDNGNGNNKDEDTTAVICSKKESEGVLVAHEDCDKFYMCSSGNPVTLKCPSNLFFSPITQTCEWSKNVECGTRVVPGEENVNTGPCNCDPKQALSLCAQEGSNGKLVAHNVCSHYHMCVSGKTLSLACPSNLFYDPQKERCDFPANVSCEGRVAPVFLPPLNKHLEARQNIRHYF

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
6G9E     E-value=2.68303e-06,     Score=129

Ontologies

KEGG
101739663    no KO assigned | (RefSeq) chondroitin proteoglycan-2-like
GO
GO:0005576   GO:0006030   GO:0008061   GO:0006412   GO:0015934   GO:0005216   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.997440
 
 
Length:
1878
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0354
Exp number, first 60 AAs:
0.02705
Total prob of N-in:
0.00153
outside
1  -  1878
 
 

Population Genetic Test Statistics

Pi
205.359826
Theta
135.525742
Tajima's D
1.317825
CLR
0.394138
CSRT
0.742962851857407
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 VAPVFLPPLNK 100.00 0.003
28556443 QTTGIVLWSEPIVTR 100.00 0.003
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 CDHGLPVALK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
28556443 AFEALPYDILWK 100.00 0.027
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