Gene

KWMTBOMO12458

Pre Gene Modal

BGIBMGA001488

Annotation

PREDICTED:_forkhead_box_protein_L1_[Amyelois_transitella]

Location

Bomo_Chr21(+):4360255-4361312      View in EpiBrowser

Transcription factor

Fork_head

Location in the cell

Nuclear   Reliability : 3.56

CDS

ATGTGCAGCGGTGCCGAGGGAGGCTCTTGGCCGCTCGGTAAAGACGCTCCGACAGTTACGGCTGCCGCAATCGACCACTATCGTCTTCAGCTTTACAATTACGCCGTCGCCGAGCGGCTACGACTATATCCACCGACGGTAGCACCATGCTATGGACCCTACGGACCGCGACTCGCGCTGTCCATGTCGCTGCTGCAGCAGCGCGCCCTGCAACCCGAAGAACCGAAGCCCCAACACAGCTACATAGGACTCATCGCGATGGCCATCCTCAGTTCACCAGAAAGGAAACTAGTTCTATCCGACATTTATCAACATATTTTGGACAATTATCCGTACTTCCGAACCCGCGGTCCCGGCTGGCGCAACTCAATACGACATAATCTATCATTGAACGACTGCTTCGTGAAGGCAGGCAGGTCAGCCAACGGGAAAGGGCACTATTGGGCCATACATCCTGCAAACGTTGAAGATTTCCGAAAGGGCGATTTTCGAAGACGCAAAGCCCAGAGAAAGGTGAGAAAACACATGGGACTAGCGGTGGACGACGATGGCGAAGACTCGCCTTCCCCGCCGCCGCAATCGCCTCCCCCGACAGCGTTACCACTTCCGTTCTGGAATGCGGCCCGACTTGCCGGCGGAGGGCAGCCGCGCAAACGACAATTCGACGTCGCCTCGCTGCTGGCGCCCGACGAAACTCCCGAGAAAAGGCAGCGGCGAGATAGCAGTTGTGACGAAGAACCCGAGGAAGATATAGATGTGGTAGCCAGCGACCAAGAGGAACGCGGTGTAGATGAAGAAACCAGAGGACCGTTGACAACGGCTACACAGTATCCTCTGCTGGGCGGATGGTGGCCGGCATTGGAACCCGCACTACTCCAGCAGCTAAGGCGGCACGCCACGCCTGCGCCTCCAAGCCCTCCCGACCAACATCGCCCGCCGGATATTTAA

Protein

MCSGAEGGSWPLGKDAPTVTAAAIDHYRLQLYNYAVAERLRLYPPTVAPCYGPYGPRLALSMSLLQQRALQPEEPKPQHSYIGLIAMAILSSPERKLVLSDIYQHILDNYPYFRTRGPGWRNSIRHNLSLNDCFVKAGRSANGKGHYWAIHPANVEDFRKGDFRRRKAQRKVRKHMGLAVDDDGEDSPSPPPQSPPPTALPLPFWNAARLAGGGQPRKRQFDVASLLAPDETPEKRQRRDSSCDEEPEEDIDVVASDQEERGVDEETRGPLTTATQYPLLGGWWPALEPALLQQLRRHATPAPPSPPDQHRPPDI

Uniprot

H9IW57   A0A2H1WHJ9   A0A2A4JXY3   A0A437BM45   A0A0L7LP32   A0A194PYE2   + More
A0A194RFX2   S4PY66   A0A2J7PYG2   A0A336KA44   A0A2P8ZCR0   A0A1B0CRB5   A0A1W4WRH0   N6U0K8   D6W7Y8   T1HEK3   E0VJF8   A0A1S3DLM5   B7PDX4   K7JBQ0   E9ID75   A0A0N0BI69   A0A2P6KNX6   A0A182H9H7   Q17PT2   T1JF42   A0A182QWC1   A0A182ML15  

Pubmed

19121390    26227816    26354079    23622113    29403074    23537049    + More
18362917    19820115    20566863    20075255    21282665    26483478    17510324   

EMBL

BABH01005864    ODYU01008712    SOQ52538.1    NWSH01000372    PCG76877.1    RSAL01000033    + More
RVE51502.1    JTDY01000431    KOB77202.1    KQ459585    KPI98356.1    KQ460211    KPJ16502.1    GAIX01003823    JAA88737.1    NEVH01020350    PNF21383.1    UFQS01000204    UFQT01000204    SSX01307.1    SSX21687.1    PYGN01000102    PSN54287.1    AJWK01024564    APGK01047100    KB741077    KB632384    ENN74126.1    ERL94257.1    KQ971307    EFA11157.1    ACPB03005031    DS235222    EEB13514.1    ABJB010027753    DS692803    EEC04796.1    AAZX01019144    GL762454    EFZ21351.1    KQ435735    KOX77122.1    MWRG01007829    PRD28040.1    JXUM01030120    KQ560873    KXJ80529.1    CH477189    EAT48760.1    JH432141    AXCN02001220    AXCM01010033   

Proteomes

UP000005204    UP000218220    UP000283053    UP000037510    UP000053268    UP000053240    + More
UP000235965    UP000245037    UP000092461    UP000192223    UP000019118    UP000030742    UP000007266    UP000015103    UP000009046    UP000079169    UP000001555    UP000002358    UP000053105    UP000069940    UP000249989    UP000008820    UP000075886    UP000075883   

PRIDE

H9IW57   

Pfam

PF00250   Forkhead

Interpro

IPR018122   TF_fork_head_CS_1        + More
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd00059  FH

ProteinModelPortal

H9IW57   A0A2H1WHJ9   A0A2A4JXY3   A0A437BM45   A0A0L7LP32   A0A194PYE2   + More
A0A194RFX2   S4PY66   A0A2J7PYG2   A0A336KA44   A0A2P8ZCR0   A0A1B0CRB5   A0A1W4WRH0   N6U0K8   D6W7Y8   T1HEK3   E0VJF8   A0A1S3DLM5   B7PDX4   K7JBQ0   E9ID75   A0A0N0BI69   A0A2P6KNX6   A0A182H9H7   Q17PT2   T1JF42   A0A182QWC1   A0A182ML15  

PDB

2HDC     E-value=9.81895e-23,     Score=263

KEGG

101736194    no KO assigned | (RefSeq) forkhead box protein C1

GO

GO:0005634   GO:0043565   GO:0003700   GO:0009653   GO:0030154   GO:0000981   GO:0006357   GO:0006355   GO:0005622   GO:0015934   GO:0005216   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Subcellular location

Nucleus  

Length:

315

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00443

Exp number, first 60 AAs:

0.00315

Total prob of N-in:

0.00960

outside

1  -  315

 

 

Pi

217.995304

Theta

227.358567

Tajima's D

-0.129691

CLR

0.324326

CSRT

0.327233638318084

Interpretation

Uncertain