Gene

KWMTBOMO12457

Pre Gene Modal

BGIBMGA001487

Annotation

cuticular_protein_RR-2_motif_77_precursor_[Bombyx_mori]

Location

Bomo_Chr21(+):4317455-4318464      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.17 PlasmaMembrane   Reliability : 1.373

CDS

ATGGTCGCCAAATTCGCAATCTTCTCCTGCCTGGTGGCTGCGGCGGCTGCTGTTGCCGTCCCCATTGTGCCAGTAGCTAAACTGGCTTACGCCGAACACGAAGCCCCCGCACACTATGACTTCGAATACTCCGTTCACGACGACCACAGCGGAGACATCAAGCAACAGAAGGAGTCCCGCGCCGGAGACGTCGTCCAGGGCTTCTACTCGCTGGTGCAACCCGACGGTGTCCACCGCATTGTCGAGTACACCGCCGACAACGAACACGGATTCAATGCTAACGTCCGCTACGAGGGACATCCTATCGCTCAGCCCGCCAAGATCGCTTACGCTGCTCCCGTACAAAACATCGCGTACGCCGCTCCCGTCCCCAAGCTCGCCTACTCTGCCCCTGTAACTAAACTAGCGTACCCAGGATCCATCACTAAAGTAGCCTACGCTCCAGCTCCAGTGACCTACGCCCAATCTCCTTTAACCAAGATTGCGTATCCAGCTCCCCTAGCCTACGCTCAGGCTCCGATCACCAAAGTCGCGTACGCACCTGCTCCAGTCGCCTACGCCTCGGCCCCTGTCGCCAAAGTCGCCTATAGCGCCCCCCTCGGACACGTCAGCTTCTCTTCCCCCGGCATTACCTACCAGCACTAA

Protein

MVAKFAIFSCLVAAAAAVAVPIVPVAKLAYAEHEAPAHYDFEYSVHDDHSGDIKQQKESRAGDVVQGFYSLVQPDGVHRIVEYTADNEHGFNANVRYEGHPIAQPAKIAYAAPVQNIAYAAPVPKLAYSAPVTKLAYPGSITKVAYAPAPVTYAQSPLTKIAYPAPLAYAQAPITKVAYAPAPVAYASAPVAKVAYSAPLGHVSFSSPGITYQH

Uniprot

C0H6R9   C0H6R8   H9IW55   C0H6Y0   A0A1W5XG69   I4DMC7   + More
B2DBI2   A0A2A4JZN9   A0A2A4JXY1   A0A437BLZ0   A0A194Q033   A0A3S2M4X4   A0A2A4JZQ5   A0A2A4JYI4   A0A194RGC7   A0A2A4JYJ5   B2DBI6   A0A194PYE1   A0A3S2NXG8   I4DJ63   A0A194PZ85   A0A194RGQ3   T1E9S8   W5JW36   A0A084WBR7   A0A182FQD0   T1E733  

Pubmed

19121390    19280704    22651552    18712529    26354079    20920257    + More
23761445    24438588   

EMBL

BABH01005857    BABH01005858    BR000578    FAA00580.1    BR000577    FAA00579.1    + More
BR000639    FAA00641.1    KY554477    ARH56586.1    AK402445    BAM19067.1    AB264662    BAG30741.1    NWSH01000372    PCG76880.1    PCG76881.1    RSAL01000033    RVE51500.1    KQ459585    KPI98354.1    RVE51499.1    PCG76882.1    PCG76869.1    KQ460211    KPJ16504.1    PCG76879.1    AB264666    BAG30745.1    KPI98352.1    RVE51501.1    AK401331    BAM17953.1    KPI98353.1    KPJ16505.1    GAMD01001618    JAA99972.1    ADMH02000274    ETN67159.1    ATLV01022427    KE525332    KFB47661.1    GAMD01003387    JAA98203.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000000673    + More
UP000030765    UP000069272   

PRIDE

C0H6R9    C0H6R8    H9IW55    C0H6Y0   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6R9   C0H6R8   H9IW55   C0H6Y0   A0A1W5XG69   I4DMC7   + More
B2DBI2   A0A2A4JZN9   A0A2A4JXY1   A0A437BLZ0   A0A194Q033   A0A3S2M4X4   A0A2A4JZQ5   A0A2A4JYI4   A0A194RGC7   A0A2A4JYJ5   B2DBI6   A0A194PYE1   A0A3S2NXG8   I4DJ63   A0A194PZ85   A0A194RGQ3   T1E9S8   W5JW36   A0A084WBR7   A0A182FQD0   T1E733  

KEGG

100379396    no KO assigned | (RefSeq) CPR77, BmorCPR77; cuticular protein RR-2 motif 77

GO

GO:0042302   GO:0016021   GO:0000166   GO:0046872   GO:0005622   GO:0015934   GO:0005216   GO:0045211   GO:0005975   GO:0004553  

SignalP

Position:   1 - 19,         Likelihood:  0.953384

 

 

Length:

214

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.59458

Exp number, first 60 AAs:

19.45741

Total prob of N-in:

0.87639

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  26

outside

27  -  214

 

 

Pi

180.281488

Theta

169.235865

Tajima's D

0.205294

CLR

7.19005

CSRT

0.429678516074196

Interpretation

Uncertain