Gene

KWMTBOMO12452  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002362

Annotation

cuticular_protein_RR-2_motif_75_precursor_[Bombyx_mori]

Location

Bomo_Chr21(-):4292434-4293294      View in EpiBrowser

Full name

Cuticle protein      

Location in the cell

Extracellular   Reliability : 1.444 PlasmaMembrane   Reliability : 1.067

CDS

ATGGCAGCTAAGTTTTTCGTCGTCCTCTCCCTGGCGGTGGCCGCTTCAGCTCTTCCAGTTCTGGAATATGCTGAGCACGAAGCCCCCGCACACTACGACTTCGAGTACTCCGTTCACGACCAACAAAGCGGAGACATCAAGCAACAGAAGGAGTCCCGCGCCGGAGACGCCGTCCAGGGCTTCTACTCGCTGGTGCAACCCGACGGTGTCCACCGCATCGTCGAGTACACCTCCGACAAAGTAAACGGATTTAACGCTAACGTCCGCTACGAGGGACACCCCGTCGCTCAGCCCGCCAAGATCGCGTACGCCGCTCCCGTCGCCAAGCTCGCCTACTCCGCCCCCGTGGCCTATGCCGCACCCGTAGCCAAGATCGCCTACAGTGCTCCTGTTGCCAAGATCGCCTACAGCGCACCCATCGCCAAGGTCGCATACGCCGCCCCAGTTGCCAAGATCGCCTACAACAGTGCTCCCTTAACCCAAGTTACCTTCTCTTCCCCTGCCATTTCCTACCACCACTAG

Protein

MAAKFFVVLSLAVAASALPVLEYAEHEAPAHYDFEYSVHDQQSGDIKQQKESRAGDAVQGFYSLVQPDGVHRIVEYTSDKVNGFNANVRYEGHPVAQPAKIAYAAPVAKLAYSAPVAYAAPVAKIAYSAPVAKIAYSAPIAKVAYAAPVAKIAYNSAPLTQVTFSSPAISYHH

Keywords

Complete proteome   Cuticle   Reference proteome   Repeat  

Feature

chain  Cuticle protein

Uniprot

C0H6R7   C0H6Y0   C0H6R8   H9IW55   A0A437BLZ0   A0A3S2M4X4   + More
C0H6R9   A0A1W5XG69   A0A194PYE1   B2DBI6   A0A2A4JZN9   A0A2A4JXY1   A0A212EX99   A0A2A4JZM8   A0A2A4JZQ5   A0A2A4JYI4   A0A212F3M1   A0A212FK22   I4DJ63   A0A194PZ85   A0A2A4JYJ5   I4DMC7   A0A212F1R9   A0A194Q033   B2DBI2   A0A194RKK4   A0A2H1WHI9   A0A194RGQ3   A0A194RGC7   A0A3S2NXG8   A0A2P8Y131   W5JUH9   A0A182VZH1   A0A1B0DNE8   A0A182VZG9   A0A2M4DMG7   A0A182ITA5   T1E9S8   Q17C02   A0A182H1C9   A0A084WBR6   A0A182W8E6   A0A182FQD0   A0A182LXP9   A0A3F2YV03   T1E733   A0A182FQD1   Q17015   A0A084VWT5   A0A1I8JTK7   A0A182XNI9   Q7Q0W8   A0A182WSM8   A0A336LLM9   A0A1W4WTD6   T1DES5   A0A182WSM6   W5JW36   A0A0L7QWA1   A0A182M9Z0   A0A1S4F8I9   A0A182H1C8   A0A084WBR8   B0X2J1   A0A182HLH8   A0A182XNI8   Q7PM04   A0A3F2YUT9   Q7PXZ2   A0A182HLH9   A0A1I8JTL5   A0A182L9W8  

Pubmed

19121390    19280704    26354079    18712529    22118469    22651552    + More
29403074    20920257    23761445    17510324    26483478    24438588    20966253    12364791    8807302    14747013    17210077   

EMBL

BABH01037875    BR000576    FAA00578.1    BR000639    FAA00641.1    BR000577    + More
FAA00579.1    BABH01005857    RSAL01000033    RVE51500.1    RVE51499.1    BABH01005858    BR000578    FAA00580.1    KY554477    ARH56586.1    KQ459585    KPI98352.1    AB264666    BAG30745.1    NWSH01000372    PCG76880.1    PCG76881.1    AGBW02011788    OWR46128.1    PCG76870.1    PCG76882.1    PCG76869.1    AGBW02010555    OWR48324.1    AGBW02008159    OWR54088.1    AK401331    BAM17953.1    KPI98353.1    PCG76879.1    AK402445    BAM19067.1    AGBW02010835    OWR47664.1    KPI98354.1    AB264662    BAG30741.1    KQ460211    KPJ16506.1    ODYU01008712    SOQ52540.1    KPJ16505.1    KPJ16504.1    RVE51501.1    PYGN01001062    PSN37972.1    ADMH02000334    ETN66923.1    AJVK01017484    GGFL01014582    MBW78760.1    GAMD01001618    JAA99972.1    CH477314    EAT43817.1    JXUM01103160    KQ564781    KXJ71758.1    ATLV01022426    KE525332    KFB47660.1    AXCM01013007    GAMD01003387    JAA98203.1    AAAB01008987    U50469    ATLV01017753    KE525185    KFB42429.1    APCN01001621    AAAB01008980    EAA14336.2    UFQT01000011    SSX17569.1    GAMD01003411    JAA98179.1    ADMH02000274    ETN67159.1    KQ414716    KOC62887.1    AXCM01017960    KXJ71757.1    ATLV01022427    KFB47662.1    DS232291    EDS39214.1    EDS39215.1    APCN01000904    EAA14555.3    EAU76101.1    EAA01340.3    EAL38557.2   

Proteomes

UP000005204    UP000283053    UP000053268    UP000218220    UP000007151    UP000053240    + More
UP000245037    UP000000673    UP000075920    UP000092462    UP000075880    UP000008820    UP000069940    UP000249989    UP000030765    UP000069272    UP000075883    UP000075882    UP000007062    UP000075840    UP000076407    UP000192223    UP000053825    UP000002320   

PRIDE

C0H6R7    C0H6Y0    C0H6R8    H9IW55    C0H6R9   

Pfam

PF00379   Chitin_bind_4        + More
PF01607   CBM_14
PF00400   WD40

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       
IPR002557   Chitin-bd_dom       
IPR036508   Chitin-bd_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR011044   Quino_amine_DH_bsu       
IPR011045   N2O_reductase_N       

SUPFAM

SSF57625   SSF57625        + More
SSF50969   SSF50969       
SSF50974   SSF50974       
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

C0H6R7   C0H6Y0   C0H6R8   H9IW55   A0A437BLZ0   A0A3S2M4X4   + More
C0H6R9   A0A1W5XG69   A0A194PYE1   B2DBI6   A0A2A4JZN9   A0A2A4JXY1   A0A212EX99   A0A2A4JZM8   A0A2A4JZQ5   A0A2A4JYI4   A0A212F3M1   A0A212FK22   I4DJ63   A0A194PZ85   A0A2A4JYJ5   I4DMC7   A0A212F1R9   A0A194Q033   B2DBI2   A0A194RKK4   A0A2H1WHI9   A0A194RGQ3   A0A194RGC7   A0A3S2NXG8   A0A2P8Y131   W5JUH9   A0A182VZH1   A0A1B0DNE8   A0A182VZG9   A0A2M4DMG7   A0A182ITA5   T1E9S8   Q17C02   A0A182H1C9   A0A084WBR6   A0A182W8E6   A0A182FQD0   A0A182LXP9   A0A3F2YV03   T1E733   A0A182FQD1   Q17015   A0A084VWT5   A0A1I8JTK7   A0A182XNI9   Q7Q0W8   A0A182WSM8   A0A336LLM9   A0A1W4WTD6   T1DES5   A0A182WSM6   W5JW36   A0A0L7QWA1   A0A182M9Z0   A0A1S4F8I9   A0A182H1C8   A0A084WBR8   B0X2J1   A0A182HLH8   A0A182XNI8   Q7PM04   A0A3F2YUT9   Q7PXZ2   A0A182HLH9   A0A1I8JTL5   A0A182L9W8  

KEGG

100379398    no KO assigned | (RefSeq) CPR75, BmorCPR75; cuticular protein RR-2 motif 75

GO

GO:0042302   GO:0016021   GO:0006030   GO:0005576   GO:0008061   GO:0031012   GO:0000166   GO:0046872   GO:0005622   GO:0015934   GO:0005216   GO:0045211   GO:0005975   GO:0004553  

SignalP

Position:   1 - 17,         Likelihood:  0.989120

 

 

Length:

173

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.95809999999999

Exp number, first 60 AAs:

5.03396

Total prob of N-in:

0.26883

outside

1  -  173

 

 

Pi

132.700837

Theta

153.382076

Tajima's D

-0.400562

CLR

42.475913

CSRT

0.265586720663967

Interpretation

Uncertain