Gene

KWMTBOMO12448  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002359

Annotation

PREDICTED:_secretory_carrier-associated_membrane_protein_1_[Amyelois_transitella]

Location

Bomo_Chr21(+):4253915-4266104      View in EpiBrowser

Full name

Secretory carrier-associated membrane protein      

Location in the cell

PlasmaMembrane   Reliability : 4.917

CDS

ATGTCTGCTGACGAACTGCAGAGGCGGCAAGAGGAGCTAGAACGGAAGGCCGAGGAGTTGGCGCGGCGGGAAGCGGAACTCCGCGCGGGGTCGGCGGGTCGCCACAATAACTGGCCGCCCCTCCCGGGCTTCTGTCCCATACAGCCGTGCTTCTACCAGGATATCAACGTCGACATACCACTCGAGTTCCAGAGGATCGTCCGTCATCTATACCATTTGTGGATGTTCTACGCGCTCGTCTTAGCTCTGAACATAGTCGGAGGGATGTCCATACTGTTCTCGGGAGGTGGCTTCACGACCTTCGGCCTCTCCATACTGTATTTCGTCCTGTTCACGCCGTTCAGTTTCGTGTGCTGGTACCGGCCGATATACAAGGCGTTCCGGAGCGACTCCTCGTTCAATTTCATGGTCTTCTTCTTCATATTCCTGTTCCAGATCATAATAACTGTGGTACAGTCGATCGGATTCAGCGACGGTGGTTCTTGCGGCCTGATCACAAGTATCAGTCAGTTCAAAACTAACATAGCCGTTGGCATCATCACGCTGATGGTGACCATAGGCTTCATCACCTGCGTTGTCGCTGACGTAATGCTGTTGGCTAAAGTGCACCGCATCTACAGGTCGACGGGCGCGTCGCTGGCCAAGGCGCAGGCCGAGTTCACGACCGAAATCCTGCGCAACCAGCACGTGCAGACCGCCGCCTCCGACGCCGCCGCTGCCGCCGTCAACGCGCAGCTCGCCGGCGCCAACCGGTACTAA

Protein

MSADELQRRQEELERKAEELARREAELRAGSAGRHNNWPPLPGFCPIQPCFYQDINVDIPLEFQRIVRHLYHLWMFYALVLALNIVGGMSILFSGGGFTTFGLSILYFVLFTPFSFVCWYRPIYKAFRSDSSFNFMVFFFIFLFQIIITVVQSIGFSDGGSCGLITSISQFKTNIAVGIITLMVTIGFITCVVADVMLLAKVHRIYRSTGASLAKAQAEFTTEILRNQHVQTAASDAAAAAVNAQLAGANRY

Similarity

Belongs to the SCAMP family.

Uniprot

A0A2H1WBI9   A0A2A4JZ08   A0A194RF97   A0A3S2PHC1   S4PN25   A0A1E1WCG5   + More
A0A194PZ80   A0A2P8Z8U3   A0A067QVR3   B4GVX8   A0A3B0JY73   Q29G52   A0A0K8SF90   A0A0K8SG73   K7JAE5   A0A232F9B7   A0A1B6H6I4   A0A1L8DUS1   U5EW33   V5GRM2   A0A1I8NE54   B4MSP7   A0A1Y1NJ24   A0A1B6M4M8   A0A1B6MU00   A0A1I8P8U5   B4L2I3   A0A1L8EI84   R4WDN8   B3NTL5   B3MR97   A0A0L0BL73   A0A026W779   A0A1A9ZSE5   A0A182H885   A0A1W4VGD8   A0A2R7VT74   Q9VXV6   A0A1Z5LHT7   A0A023EPB6   B4PWM6   B4JXF4   A0A224XFG3   A0A069DT84   A0A1A9VP65   Q9NHD7   A0A0P4WQ78   A0A1A9X0E1   A0A0P4W0M6   Q0C739   A0A1B0BM70   D3TN59   A0A023FAD8   L7M8N9   A0A0K8W5L4   A0A1Z5KWL3   A0A1B6D339   A0A0V0G4Z1   A0A1B6DXV7   A0A224YQS3   A0A1W4XNI9   A0A131YYJ3   D6W733   A0A131XG46   A0A023GIX8   A0A3Q0IT83   A0A0P5BH36   A0A293LL67   V5HX67   B7PH82   E9GGI1   A0A3Q0IT75   A0A1E1X4Q7   A0A0J7KRY5   A0A2R5LM87   A0A2M4AGM0   A0A2M4AGK6   A0A2J7RIA9   A0A2M3Z4W8   A0A1B6GG60   A0A1B6FC48   A0A2M4AFR8   W5JN59   A0A0C9RYF0   A0A0N8DMS8   A0A034WRW1   A0A182F7B8   A0A2M4BS22   T1E1M6   V9ILL4   T1GPF7   A0A0K8TPE0   A0A1S3JM52   A0A2A3EBH7   A0A087ZN54   A0A1S3KHG0   E9IJR3   A0A2P1JJ62   A0A0A1X3M9  

Pubmed

26354079    23622113    29403074    24845553    17994087    15632085    + More
23185243    20075255    28648823    25315136    28004739    23691247    26108605    24508170    30249741    26483478    11050114    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28528879    24945155    17550304    26334808    27129103    17510324    20353571    25474469    25576852    28797301    26830274    18362917    19820115    28049606    25765539    21292972    28503490    20920257    23761445    25348373    24330624    26369729    21282665    25830018   

EMBL

ODYU01007252    SOQ49864.1    NWSH01000372    PCG76874.1    KQ460211    KPJ16508.1    + More
RSAL01000033    RVE51495.1    GAIX01001102    JAA91458.1    GDQN01006503    GDQN01001452    JAT84551.1    JAT89602.1    KQ459585    KPI98348.1    PYGN01000144    PSN52916.1    KK852898    KDR14142.1    CH479193    EDW26823.1    OUUW01000003    SPP78316.1    CH379064    EAL32258.1    GBRD01014042    JAG51784.1    GBRD01014041    JAG51785.1    AAZX01000907    NNAY01000604    OXU27426.1    GECU01037381    JAS70325.1    GFDF01003918    JAV10166.1    GANO01000733    JAB59138.1    GALX01004189    JAB64277.1    CH963851    EDW75136.1    GEZM01005543    JAV96106.1    GEBQ01009097    JAT30880.1    GEBQ01026735    GEBQ01000594    JAT13242.1    JAT39383.1    CH933810    EDW06859.1    GFDG01000480    JAV18319.1    AK417699    BAN20914.1    CH954180    EDV47019.1    CH902622    EDV34302.1    JRES01001702    KNC20792.1    KK107364    QOIP01000007    EZA51962.1    RLU20450.1    JXUM01117827    JXUM01117828    JXUM01117829    JXUM01117830    KQ566123    KXJ70376.1    KK854073    PTY10712.1    AE014298    AF241834    AY075562    AAF48452.1    AAF64492.1    AAL68369.1    AGB95414.1    GFJQ02000021    JAW06949.1    GAPW01002281    JAC11317.1    CM000162    EDX01772.1    CH916376    EDV95430.1    GFTR01005219    JAW11207.1    GBGD01001938    JAC86951.1    AF224720    AAF35367.1    GDRN01050568    JAI66455.1    GDKW01000169    JAI56426.1    CH477186    EAT48990.1    JXJN01016714    CCAG010016130    EZ422861    ADD19137.1    GBBI01000332    JAC18380.1    GACK01005555    JAA59479.1    GDHF01006139    JAI46175.1    GFJQ02007612    JAV99357.1    GEDC01017198    JAS20100.1    GECL01003046    JAP03078.1    GEDC01006928    GEDC01006807    JAS30370.1    JAS30491.1    GFPF01005034    MAA16180.1    GEDV01005566    JAP82991.1    KQ971307    EFA11500.1    GEFH01003034    JAP65547.1    GBBM01001501    JAC33917.1    GDIP01184491    LRGB01000725    JAJ38911.1    KZS16361.1    GFWV01004722    MAA29452.1    GANP01001184    JAB83284.1    ABJB011041138    DS711545    EEC05954.1    GL732543    EFX81404.1    GFAC01004955    JAT94233.1    LBMM01003906    KMQ93009.1    GGLE01006495    MBY10621.1    GGFK01006566    MBW39887.1    GGFK01006603    MBW39924.1    NEVH01003502    PNF40565.1    GGFM01002816    MBW23567.1    GECZ01008369    JAS61400.1    GECZ01021982    JAS47787.1    GGFK01006308    MBW39629.1    ADMH02001070    ETN64209.1    GBYB01014280    JAG84047.1    GDIP01018423    JAM85292.1    GAKP01002449    JAC56503.1    GGFJ01006736    MBW55877.1    GALA01001524    JAA93328.1    JR050885    AEY61376.1    CAQQ02033608    CAQQ02033609    GDAI01001585    JAI16018.1    KZ288302    PBC28814.1    GL763883    EFZ19135.1    MF385056    AVN99051.1    GBXI01008801    JAD05491.1   

Proteomes

UP000218220    UP000053240    UP000283053    UP000053268    UP000245037    UP000027135    + More
UP000008744    UP000268350    UP000001819    UP000002358    UP000215335    UP000095301    UP000007798    UP000095300    UP000009192    UP000008711    UP000007801    UP000037069    UP000053097    UP000279307    UP000092445    UP000069940    UP000249989    UP000192221    UP000000803    UP000002282    UP000001070    UP000078200    UP000091820    UP000008820    UP000092460    UP000092444    UP000192223    UP000007266    UP000079169    UP000076858    UP000001555    UP000000305    UP000036403    UP000235965    UP000000673    UP000069272    UP000015102    UP000085678    UP000242457    UP000005203   

PRIDE

Q9VXV6    Q9NHD7   

Pfam

PF04144   SCAMP

Interpro

IPR007273   SCAMP        + More
IPR036259   MFS_trans_sf       

SUPFAM

SSF103473   SSF103473       

ProteinModelPortal

A0A2H1WBI9   A0A2A4JZ08   A0A194RF97   A0A3S2PHC1   S4PN25   A0A1E1WCG5   + More
A0A194PZ80   A0A2P8Z8U3   A0A067QVR3   B4GVX8   A0A3B0JY73   Q29G52   A0A0K8SF90   A0A0K8SG73   K7JAE5   A0A232F9B7   A0A1B6H6I4   A0A1L8DUS1   U5EW33   V5GRM2   A0A1I8NE54   B4MSP7   A0A1Y1NJ24   A0A1B6M4M8   A0A1B6MU00   A0A1I8P8U5   B4L2I3   A0A1L8EI84   R4WDN8   B3NTL5   B3MR97   A0A0L0BL73   A0A026W779   A0A1A9ZSE5   A0A182H885   A0A1W4VGD8   A0A2R7VT74   Q9VXV6   A0A1Z5LHT7   A0A023EPB6   B4PWM6   B4JXF4   A0A224XFG3   A0A069DT84   A0A1A9VP65   Q9NHD7   A0A0P4WQ78   A0A1A9X0E1   A0A0P4W0M6   Q0C739   A0A1B0BM70   D3TN59   A0A023FAD8   L7M8N9   A0A0K8W5L4   A0A1Z5KWL3   A0A1B6D339   A0A0V0G4Z1   A0A1B6DXV7   A0A224YQS3   A0A1W4XNI9   A0A131YYJ3   D6W733   A0A131XG46   A0A023GIX8   A0A3Q0IT83   A0A0P5BH36   A0A293LL67   V5HX67   B7PH82   E9GGI1   A0A3Q0IT75   A0A1E1X4Q7   A0A0J7KRY5   A0A2R5LM87   A0A2M4AGM0   A0A2M4AGK6   A0A2J7RIA9   A0A2M3Z4W8   A0A1B6GG60   A0A1B6FC48   A0A2M4AFR8   W5JN59   A0A0C9RYF0   A0A0N8DMS8   A0A034WRW1   A0A182F7B8   A0A2M4BS22   T1E1M6   V9ILL4   T1GPF7   A0A0K8TPE0   A0A1S3JM52   A0A2A3EBH7   A0A087ZN54   A0A1S3KHG0   E9IJR3   A0A2P1JJ62   A0A0A1X3M9  

KEGG

101740922    K19995 secretory carrier-associated membrane protein | (RefSeq) secretory carrier-associated membran

GO

GO:0016021   GO:0015031   GO:0007274   GO:0007616   GO:0043195   GO:0016079   GO:0030424   GO:0008021   GO:0005794   GO:0032588   GO:0000139   GO:0055038   GO:0009396   GO:0005622   GO:0015934   GO:0005216   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR10687  

Subcellular location

Membrane  

Length:

252

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.1012000000002

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.99967

inside

1  -  70

TMhelix

71  -  93

outside

94  -  97

TMhelix

98  -  120

inside

121  -  132

TMhelix

133  -  155

outside

156  -  174

TMhelix

175  -  197

inside

198  -  252

 

 

Pi

162.440619

Theta

218.947097

Tajima's D

0.449583

CLR

0.431843

CSRT

0.491975401229938

Interpretation

Uncertain