SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12440
Pre Gene Modal
BGIBMGA002366
Annotation
363_100_1_protein_[Mamestra_configurata]
Location in the cell
PlasmaMembrane   Reliability : 2.765
 

Sequence

CDS
ATGACGCGTTTTCTTAGTTTTATGGTATTAATAACGTGGGCCACAATGGCCAGGAGTGAATGCATACAATTTACATTCGAAAGTGGTATCGGCTTATACGGAAATGATAGTGCTATGTGTAGTCCATTCCCGATTTGGAATTTGGGGACGTATTCCTCTATAGAAGTGGAAACGCCTCATGTCAAAAGCACCCATTTCGTGGAGCCTAACGATAGGACCAGCTGTTTCACATCGCCCAAAATACAAATGGAAAATGGTGGACGTTTAGAAATTAATGTCTTTGTGGATTCAGTAGTTGGACGGGACATAAGTTTGTCGGTCGTGGTCTCCGAAAATGTTCCAAATGGTGTAGATTCAATTGTTGCTGTTTCAAATCTGCCTCAATCAACCACTCCAGGCTGGCACGTCTTGAGTGCAAACATTGTAGGGAGTGTGGCTTTCGAAGGATACGTTAACTTCATCGGTCACAGATCAACGGGGTCCCATATTTTGATCGATGCCATCCGTTACATCCCTCCACATGTTGATGTAAACGACTGTGTTTTGTATGAAGACGACGAGACAACCCCACAGCCAGAAGCGACGACACCTGAAGCAAATGACGTTGAAGAATGCATCACGTTTAACTTCGAAGAAAACACGGAGAAACTCTTCGATGATAACAATTATTTGTGCGACGGCTTCGTTCCTTGGAATATTGGGAACTATGCGAACATCAGAATAGAGAGTCAGAACGTGGGAAGTGAAAAATTCTTGACTCCAAATCAGCAGTCCAGTTGCACGGCTTCTTTCGCGTTCCCAATGACCCCCGGCGGCGTAATAGAAGCCAATGTATATGTAGATCACACGTCCAATTTAGATCATGTTATAATTTTGGTCAAGAACCTAGTTTCCAACGGAGTAGATACTGTTGCAGGATTCCAGATTTTTGAACCGTCTCGTGCTTCTTTCGTGACAGGGTGGAGCGTAATTCGCATTCCCATCGCTAACTTAATCCCTTTCAATGGATATTTGGTGTTCCTCGGAGCAGCGGCTGAAGGTTCGAAAGTTCTAGTTGATTCGTTCAGATACATTCCGCCCGGCACTCCTGCGGACCACGAATCATGCGCTATATACTAA
Protein
MTRFLSFMVLITWATMARSECIQFTFESGIGLYGNDSAMCSPFPIWNLGTYSSIEVETPHVKSTHFVEPNDRTSCFTSPKIQMENGGRLEINVFVDSVVGRDISLSVVVSENVPNGVDSIVAVSNLPQSTTPGWHVLSANIVGSVAFEGYVNFIGHRSTGSHILIDAIRYIPPHVDVNDCVLYEDDETTPQPEATTPEANDVEECITFNFEENTEKLFDDNNYLCDGFVPWNIGNYANIRIESQNVGSEKFLTPNQQSSCTASFAFPMTPGGVIEANVYVDHTSNLDHVIILVKNLVSNGVDTVAGFQIFEPSRASFVTGWSVIRIPIANLIPFNGYLVFLGAAAEGSKVLVDSFRYIPPGTPADHESCAIY

Summary

PDB
1TMF     E-value=0.0151844,     Score=90

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.997099
 
 
Length:
372
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.86462
Exp number, first 60 AAs:
0.02533
Total prob of N-in:
0.00998
outside
1  -  372
 
 

Population Genetic Test Statistics

Pi
137.986801
Theta
152.667521
Tajima's D
-0.642512
CLR
211.84986
CSRT
0.208289585520724
Interpretation
Uncertain
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