SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12437  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012410
Annotation
PREDICTED:_prisilkin-39-like_isoform_X5_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.762 Nuclear   Reliability : 1.878
 

Sequence

CDS
ATGAATTATTTGAGTCTTCTTTTGTTATGCTGCTCGGCGGCCGTGACGATCGGACAAAGAGTATCGGATACGAGCAATGACTTTACCGGTCAAACGCGAAACGCGGGCGGTTACGGCCTTCTAAAGCCGGGCTATCAAAACGGTTACAGCGGCTATGGCGGCTACAACACCGGCAGCGCTGGAAGCAGTTACCCGGGTTACGGAAATTATCCTGGCTACGGCAGCTCGGGTTTCGGTTACGGAAATACCGGTTTAAGTAACGGCTACGCCGGTTTCGGTTATCCGGGTCAAAGTTATCAGGGCGGGTTTGGCGGTAACTATGGTGGTTACCAAGGCGGATATCAAGGCGGTTATCAGGGAGGCTTCGGCGGACTTTCAGGGTACCCGGGCTATGGAGGGTACAGACCGGGATATCAGAGCGGCAGTGCCGGTTACCCGGGCTACAAATCTGGATACAACCAATACAGATCCAGTTTCGACCGGTACCCCGCGACCAACGCTGGTAATTTCTTTGGAGGCTACGGCGACGGCTACAGCGACAACTTTAGGGTGGTCGCGAGAAGTACTAACGAGAAGAAGAAGGTGGAAACTGTAGCTTAA
Protein
MNYLSLLLLCCSAAVTIGQRVSDTSNDFTGQTRNAGGYGLLKPGYQNGYSGYGGYNTGSAGSSYPGYGNYPGYGSSGFGYGNTGLSNGYAGFGYPGQSYQGGFGGNYGGYQGGYQGGYQGGFGGLSGYPGYGGYRPGYQSGSAGYPGYKSGYNQYRSSFDRYPATNAGNFFGGYGDGYSDNFRVVARSTNEKKKVETVA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998346
 
 
Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11648
Exp number, first 60 AAs:
0.09184
Total prob of N-in:
0.01652
outside
1  -  199
 
 

Population Genetic Test Statistics

Pi
201.980593
Theta
160.45501
Tajima's D
1.602453
CLR
0.366536
CSRT
0.812259387030648
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 FGMSYNGVETTPEGK 100.00 2e-12
26280517 SSCTTEGAQIMVPASEQDIIQIHSMFK 100.00 2e-12
27102218 SGYNQYR 100.00 2e-12
28467696 SSFDDTFNQVQK 100.00 2e-12
26822097 SSFDRYPATNAGNFFGGYGDGYSDNFR 100.00 5e-09
28556443 VSDTSNDFTGQTR 100.00 5e-09
26822097 PGYQSGSAGYPGYK 100.00 0.021
26280517 VQGITFPSGDMQR 100.00 0.021
28467696 VSDTSIDITR 100.00 0.021
28556443 PGYQSGSAGYPGYK 100.00 0.021
28556443 PGYQSGSAGYPGYK 100.00 0.021
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