Gene

KWMTBOMO12436  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012450

Annotation

PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_1_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr21(+):3355051-3370448      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.811

CDS

ATGTCAAAATCTAACCTCTTAGAAATAGTACCAGACGAACTATTCCAATCTCACTCTATCAACGAGATTGATCAGGTACAGAAGAAGCTACAATATGAAATTGAAAGGAGAAGAGAAGAATTGCGTGCTATGGTCGGGGAGAGGTACAGAGACTTGATTCATGCTGCTGATACCATAGAAGACATGAGAGTTACGACAGCGAGCACTTTGAATCACATCAGTGAAATGATGAAAGCATGTCAGAATTTACATAACACACATTTAGTTGGCTTCAAAATTAGTAATGCTCCCACACCAACTCAAAGTTACAATGTAAATTCAAATCAGCTGCATAGCTTGTCTGTTCAACTGAAAATCTTAATGGAAATTCCTGAAAAGATATGGACATGCATTGAAACAGAGGATTTTGTGAAAGCTACCCAGCTGTTTATATTCGCCAGGCATGTTAACACAGGTTTGCAGCTGCAAATAGGAGGACAGAAATCACAGCCCGGCGTACAATCATTTCATAGAATGGTACAGCAACAGTGGAATTCGATATCTAATTTCAACCAGACTATAATTAGAGTATGTAAGGAGAAACTGCAGAATGTGGAAATAAGTGTTGAGATTGCGTGCTCCTGTTTGGTTAGCCTGTATCTTCTCGACTCCCAAACAATGGTCGAACTACTTAATACACTAATAACACTACATAGTAACAATAGCTTGAAAGCAACGCTCCAGTTTGATTTAGCTAAAATATTAGAAGGGGATGTGAAAGCTCAAATCAAAGAGAAAATTGTGAACGGAGTTAAAAATGTGTTGAAGACTGTTGTTTTGGTTTATGCTTGTTTTGTTGATGATGCTGGCGGAGCAGTATTGTCGAAGCTAAAAGAACTCTTTAAGAAAAATTCTCAACCACTTCTCGAATTAGTCAAGTTCTCTGATCCTAATGCATTAAAACTATTACCACCAGCAATATCAAATTATAGGCTATCAACAACACAAGAACCCCAAGCTTTAGAGGAAGCGGACATAAGGAAATCAGTTCAAGTTTGGAATGTTTGGGTGAAGTCTTTCATCGAGACCAACGTGCAGACTCTACTTCAGAACGTGACGAGAATCAAAGTACTCCACGAAATAAGAGAAGAAGCATTTAAAATTGAAACGCCGCCGAACTGGAGTACAATTTGCTCGTCCCTGGATATTCCCGATGTCCACGTCTGGTGTCACTACTACCAGCCTCTTTTAACGGCTCGGGTCAAAGCGATAATAGACACCCGATGGGGGAAACTGTATGATACTTTCAAAACACAAATATTAGTGGACTTGACTAAGGTATCATGTGAAAGCGAAATGGAAAAGGAAGCCGACATAAACTGGTTCGTGTGGAAGGATCTCATCGGGGAGACGGTCATAGAGTCCAGAAGTGACGTCGTCAAAGTCATGAACTCTCTAATGAAAGGCATGTCCCGACAAGACCACGGCTACACCCCTACCCTGGAGAAGCTGTGCCAAACTCTGGATAGCGAACTGCAGAAGCTTCTAGAAGATTTACGAACGTACCTATACCCGGAGAAGAGGAACGCACGAGACGGCCTGCTGTTTGATTACGAAGAAGAAAATGGTATCGATCAAATGTATATCGATAAGGAAGATATCGATTCGTATCTCAGAGACGTCTCCGACACTAACGTCGAGAGCATGATCCATTACATAAAGGCTTGTTTCGAGGAACCAACGCTTCAGTCTACTGAATTAAAACGAAAAACAACTGCCATATACTCGGCAAGACTCACCCAGGCCATAACGACCCTTATACCCCATCTACATAGGTGTTACATTCCCGAAACGTCCGATAGCATTGCTCTCTGCAACACCGATGAACATTGTATCAAACGTTGGAACTCTCTATGTGGGAAATTGAAGGAAAACTGCCTTTATTGTTGGGGGAAATGGGTCGATATTGTCACTGAGAAAATCGAAGATTTGACCAAACGTTTGCCACAAGAGTTCACATTAGAAGCCAATATCGATTATTTAATGATGCAATGGGACGTAATAAAAATAGTTGAGAAAGATGACGAAGGAAACTCTATAGAATCAACTATAAAAGTGCCATGCGGTCCTTCGTTAAAGCTACAAGAATATTTATATTCGGTCAGCCGGGTCTTAGACGAGATCGTACCTCACACGCTACCCATCGAAACACATCACACGTTTATCGACAAAGTAACGCACATCACTTTCTCGCACTACAACAAGGTTATAAGAGAGAAAGAGACGGATATAAATCAGAGATGCGCTCTTCAGTTGCTAATGGACGTCCGGCACATGACCCTATTGTTCGTTGCGAGAGAGAACAAGAAATACGTTGAGCTATCTCAAGAGATTTGTGAGTTTTTGAGGCAGAAGATAGATCCGTTCGATTATGACGTTTTTTATCCGTACATACAGACGAACCTTAAACGCTCTGTGCAGAGAGTTCAGACGTTACTAGGGAGCCTGATACTCCACCACGGCCAACTGGTTGGGATAATTGGCTCGAAGCCGATACTGTCAGGCGGCACCGGCGACAAGGCGGCCAGCCTGCTGGCGTGCGGCGACGCGCACTGGTACTCGCTGCTGCCCGTGGCCACTCCCGTAGCGCACCAAAAGAAGCAAGATAAAGCGGTTAAAAAGAAAACGGTCACTTCGGCGAGCCCGACGAAACAAAAGTCTGACATCTCTGATATTATGACAAGTTCATTGCCGATCAACTTTGCTAATGCGCGTTCGGGTGCAGCTTCGTTCTTCAATTCGATGACTTCGGACTGGTTCAGCGGACAATAG

Protein

MSKSNLLEIVPDELFQSHSINEIDQVQKKLQYEIERRREELRAMVGERYRDLIHAADTIEDMRVTTASTLNHISEMMKACQNLHNTHLVGFKISNAPTPTQSYNVNSNQLHSLSVQLKILMEIPEKIWTCIETEDFVKATQLFIFARHVNTGLQLQIGGQKSQPGVQSFHRMVQQQWNSISNFNQTIIRVCKEKLQNVEISVEIACSCLVSLYLLDSQTMVELLNTLITLHSNNSLKATLQFDLAKILEGDVKAQIKEKIVNGVKNVLKTVVLVYACFVDDAGGAVLSKLKELFKKNSQPLLELVKFSDPNALKLLPPAISNYRLSTTQEPQALEEADIRKSVQVWNVWVKSFIETNVQTLLQNVTRIKVLHEIREEAFKIETPPNWSTICSSLDIPDVHVWCHYYQPLLTARVKAIIDTRWGKLYDTFKTQILVDLTKVSCESEMEKEADINWFVWKDLIGETVIESRSDVVKVMNSLMKGMSRQDHGYTPTLEKLCQTLDSELQKLLEDLRTYLYPEKRNARDGLLFDYEEENGIDQMYIDKEDIDSYLRDVSDTNVESMIHYIKACFEEPTLQSTELKRKTTAIYSARLTQAITTLIPHLHRCYIPETSDSIALCNTDEHCIKRWNSLCGKLKENCLYCWGKWVDIVTEKIEDLTKRLPQEFTLEANIDYLMMQWDVIKIVEKDDEGNSIESTIKVPCGPSLKLQEYLYSVSRVLDEIVPHTLPIETHHTFIDKVTHITFSHYNKVIREKETDINQRCALQLLMDVRHMTLLFVARENKKYVELSQEICEFLRQKIDPFDYDVFYPYIQTNLKRSVQRVQTLLGSLILHHGQLVGIIGSKPILSGGTGDKAASLLACGDAHWYSLLPVATPVAHQKKQDKAVKKKTVTSASPTKQKSDISDIMTSSLPINFANARSGAASFFNSMTSDWFSGQ

Uniprot

H9JSD9   A0A2A4JFR1   A0A3S2NSS2   A0A0N0PDD0   A0A194Q4K0   A0A212EPZ5   + More
A0A2J7Q186   A0A2P8ZCQ9   A0A154PKL3   A0A0L7QU42   A0A026WPQ4   K7IMG4   A0A195CBK8   A0A232EV34   A0A0C9RT68   A0A158NIR3   A0A195FRX4   A0A195BXB0   F4WDG1   A0A3L8DL01   A0A2A3EG82   A0A151J797   A0A0M8ZXS6   A0A151X0Q6   E9IZQ0   A0A0P6IU56   A0A182Q3X1   A0A182MGL3   A0A182JTA9   A0A182GU93   Q380E5   A0A182VB08   F5HMT3   Q173I8   A0A182YBC7   A0A2C9GQI2   A0A1Y9J119   A0A1Y9J0I5   A0A182UCQ7   U5EPB5   A0A3F2YUS9   A0A182P9L2   B0WM16   A0A2M4BCB4   A0A1Q3F8N5   A0A182JJA0   A0A1Q3F8K9   A0A1Q3F8R5   A0A1Q3F8F8   A0A2M4AEN7   A0A182RNL0   A0A2M4AE89   A0A182VVS0   A0A084VS88   A0A1J1I3I7   W5J7F7   A0A182FSQ6   A0A1Y1M0W5   A0A088AJS7   A0A1B0CKF5   A0A336MG11   D6WSG7   A0A0K8VWV1   A0A034VLY8   A0A0A1X9M4   A0A1L8DZ35   E0VS87   A0A1L8DZK2   A0A0K8V640   W8ANV0   A0A0A1XPL7   E2A9Q6   A0A1B6GB95   A0A1L8DYM6   A0A2C9LUZ1   E2BRQ3   A0A2T7NEK4   B4M5B1   A0A0L0CEL9   E9G1K2   A0A1B0DG76   A0A336MT57   A0A1I8PA83   A0A182SCC8   A0A0P5UQ00   A0A0P4YEA3   A0A023EXL1   A0A0Q9X199   A0A069DWK0   A0A0P5EX65   A0A0P5GCV8   Q295R8   B4KDI5   A0A0P5JW63   A0A0P6I6U8   A0A0P5FXE1   A0A1I8N4E9   B4GFS6   A0A1A9VCZ7  

Pubmed

19121390    26354079    22118469    29403074    24508170    20075255    + More
28648823    21347285    21719571    30249741    21282665    26999592    26483478    12364791    14747013    17210077    17510324    25244985    20966253    24438588    20920257    23761445    28004739    18362917    19820115    25348373    25830018    20566863    24495485    20798317    15562597    17994087    26108605    21292972    25474469    26334808    15632085    25315136   

EMBL

BABH01033827    NWSH01001640    PCG70606.1    RSAL01000243    RVE43619.1    KQ460234    + More
KPJ16411.1    KQ459585    KPI98335.1    AGBW02013352    OWR43546.1    NEVH01019431    PNF22353.1    PYGN01000102    PSN54283.1    KQ434948    KZC12421.1    KQ414736    KOC62140.1    KK107152    EZA57074.1    KQ978068    KYM97586.1    NNAY01002055    OXU22219.1    GBYB01010696    JAG80463.1    ADTU01017083    KQ981285    KYN43181.1    KQ976394    KYM93222.1    GL888087    EGI67741.1    QOIP01000007    RLU21051.1    KZ288266    PBC30229.1    KQ979695    KYN19709.1    KQ435803    KOX73107.1    KQ982603    KYQ53960.1    GL767232    EFZ13984.1    GDUN01000548    JAN95371.1    AXCN02001519    AXCM01000656    JXUM01088824    JXUM01088825    JXUM01088826    KQ563727    KXJ73435.1    AAAB01008987    EAL38620.3    EGK97605.1    CH477423    EAT41208.1    APCN01000836    GANO01000232    JAB59639.1    DS231993    EDS30831.1    GGFJ01001545    MBW50686.1    GFDL01011139    JAV23906.1    GFDL01011140    JAV23905.1    GFDL01011128    JAV23917.1    GFDL01011191    JAV23854.1    GGFK01005777    MBW39098.1    GGFK01005778    MBW39099.1    ATLV01015877    KE525039    KFB40832.1    CVRI01000036    CRK92921.1    ADMH02002125    ETN58724.1    GEZM01043019    JAV79379.1    AJWK01016181    UFQS01001092    UFQT01001092    SSX08959.1    SSX28870.1    KQ971352    EFA07501.1    GDHF01008956    JAI43358.1    GAKP01014621    GAKP01014620    JAC44331.1    GBXI01006293    JAD07999.1    GFDF01002380    JAV11704.1    DS235746    EEB16243.1    GFDF01002379    JAV11705.1    GDHF01017922    JAI34392.1    GAMC01020392    JAB86163.1    GBXI01001013    JAD13279.1    GL437918    EFN69858.1    GECZ01010069    JAS59700.1    GFDF01002514    JAV11570.1    GL449978    EFN81647.1    PZQS01000013    PVD19608.1    CH940652    EDW59822.1    JRES01000608    KNC29909.1    GL732529    EFX86508.1    AJVK01015178    UFQT01001145    SSX29148.1    GDIP01110030    JAL93684.1    GDIP01232278    JAI91123.1    GBBI01004757    JAC13955.1    CH933806    KRG01852.1    GBGD01000476    JAC88413.1    GDIQ01266556    JAJ85168.1    GDIQ01248180    JAK03545.1    CM000070    EAL28640.2    EDW15994.1    GDIQ01198152    JAK53573.1    GDIQ01008766    JAN85971.1    GDIQ01252631    JAJ99093.1    CH479182    EDW34461.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000235965    UP000245037    UP000076502    UP000053825    UP000053097    UP000002358    UP000078542    UP000215335    UP000005205    UP000078541    UP000078540    UP000007755    UP000279307    UP000242457    UP000078492    UP000053105    UP000075809    UP000075886    UP000075883    UP000075881    UP000069940    UP000249989    UP000007062    UP000075903    UP000008820    UP000076408    UP000075840    UP000076407    UP000075902    UP000075882    UP000075885    UP000002320    UP000075880    UP000075900    UP000075920    UP000030765    UP000183832    UP000000673    UP000069272    UP000005203    UP000092461    UP000007266    UP000009046    UP000000311    UP000076420    UP000008237    UP000245119    UP000008792    UP000037069    UP000000305    UP000092462    UP000095300    UP000075901    UP000009192    UP000001819    UP000095301    UP000008744    UP000078200   

PRIDE

H9JSD9   

Pfam

PF13460   NAD_binding_10        + More
PF01336   tRNA_anti-codon
PF00152   tRNA-synt_2
PF00614   PLDc
PF13918   PLDc_3

Interpro

IPR033370   COG1        + More
IPR016040   NAD(P)-bd_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR002312   Asp/Asn-tRNA-synth_IIb       
IPR006195   aa-tRNA-synth_II       
IPR012340   NA-bd_OB-fold       
IPR004365   NA-bd_OB_tRNA       
IPR004364   aa-tRNA-synt_II       
IPR032803   PLDc_3       
IPR001736   PLipase_D/transphosphatidylase       

SUPFAM

SSF51735   SSF51735        + More
SSF50249   SSF50249       

ProteinModelPortal

H9JSD9   A0A2A4JFR1   A0A3S2NSS2   A0A0N0PDD0   A0A194Q4K0   A0A212EPZ5   + More
A0A2J7Q186   A0A2P8ZCQ9   A0A154PKL3   A0A0L7QU42   A0A026WPQ4   K7IMG4   A0A195CBK8   A0A232EV34   A0A0C9RT68   A0A158NIR3   A0A195FRX4   A0A195BXB0   F4WDG1   A0A3L8DL01   A0A2A3EG82   A0A151J797   A0A0M8ZXS6   A0A151X0Q6   E9IZQ0   A0A0P6IU56   A0A182Q3X1   A0A182MGL3   A0A182JTA9   A0A182GU93   Q380E5   A0A182VB08   F5HMT3   Q173I8   A0A182YBC7   A0A2C9GQI2   A0A1Y9J119   A0A1Y9J0I5   A0A182UCQ7   U5EPB5   A0A3F2YUS9   A0A182P9L2   B0WM16   A0A2M4BCB4   A0A1Q3F8N5   A0A182JJA0   A0A1Q3F8K9   A0A1Q3F8R5   A0A1Q3F8F8   A0A2M4AEN7   A0A182RNL0   A0A2M4AE89   A0A182VVS0   A0A084VS88   A0A1J1I3I7   W5J7F7   A0A182FSQ6   A0A1Y1M0W5   A0A088AJS7   A0A1B0CKF5   A0A336MG11   D6WSG7   A0A0K8VWV1   A0A034VLY8   A0A0A1X9M4   A0A1L8DZ35   E0VS87   A0A1L8DZK2   A0A0K8V640   W8ANV0   A0A0A1XPL7   E2A9Q6   A0A1B6GB95   A0A1L8DYM6   A0A2C9LUZ1   E2BRQ3   A0A2T7NEK4   B4M5B1   A0A0L0CEL9   E9G1K2   A0A1B0DG76   A0A336MT57   A0A1I8PA83   A0A182SCC8   A0A0P5UQ00   A0A0P4YEA3   A0A023EXL1   A0A0Q9X199   A0A069DWK0   A0A0P5EX65   A0A0P5GCV8   Q295R8   B4KDI5   A0A0P5JW63   A0A0P6I6U8   A0A0P5FXE1   A0A1I8N4E9   B4GFS6   A0A1A9VCZ7  

KEGG

101743825    K20288 conserved oligomeric Golgi complex subunit 1 | (RefSeq) conserved oligomeric Golgi complex su

GO

GO:0006891   GO:0017119   GO:0005794   GO:0006418   GO:0003676   GO:0004812   GO:0005524   GO:0003824  

PANTHER

PTHR31658  

Length:

936

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0238099999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00071

outside

1  -  936

 

 

Pi

148.170565

Theta

164.673327

Tajima's D

-0.786855

CLR

2.329818

CSRT

0.180440977951102

Interpretation

Uncertain