Gene
KWMTBOMO12433
Pre Gene Modal
BGIBMGA011396
Annotation
endonuclease-reverse_transcriptase_[Bombyx_mori]
Location in the cell
Cytoplasmic Reliability : 1.731 Mitochondrial Reliability : 1.187 Nuclear Reliability : 1.379
Sequence
CDS
ATGTCATGCAATCCGACTGACCCCCGGCGCCATAGTGATCCCGGGTCACATGGTGGGAAGTATGCTACCGGCCACTGTACTGTAGACCACCAGGTAGGCAGTGGAAACTATGCAACTGGTGATGTTACTGGTAAAAGTAAAACCCAACTGAGAAAATATTTGCGTATGGGAACTTGGAATGTGAGAGGAATGTTGAAACCGGGTAAGCAAGAAGTCATCGAGAGGGAGATGTTAAGGTGCAAAATCGACATATTGGGGCTAAGTGAAGTTCATAGAAGAGGCAGCGGTCATATAAAAACTGCTAACGGGAACATCTTGTACTTTTCGGGATCGGAAAATCATAGTGGTAATGGAGTTGCTATAATTTTACCACAGAAACTTGAAAGCAGCGTGTTAGGATACAAAACACCAAGTGATCGTATTATTGCTGTTAAACTTGATGCGCGCCCCGTACCTATCAACATTGTCCAGGTGTATGCACCAACCTCCCAATCTGAAGAAATTATATCTGACCAATTCTATTTTGAATTGGATGACTTGTTGCGTACTATTCCATCTAAGGAGGTGACTGTTGTGTGCGGCGATTGGAACGCGAAGGTTGGTACCACTAGAGGTGATGTATTACTCGGAGCAACAGTCGGAAACTTTGGACTTGGTGTGAGGAATGACAGAGGTGAAAAATTTCTTCAATTCTGCGTGGAAAATCAGCTGGTCATCATGAACACCTGGTTTGAACACCACCCGAGAAGGTTATATACTTGGATATCGCCATGTGGACATCGGAACCAGATTGATTATATTACCATCAAGTCTAGGTGGCGATCTTCCGTATTGAATACTAAAACACTTCCTGGTGCCGACTGCGGAAGTGATCACCAGTTGGTGGTGGCAGACTTCAGACTTCGTTTAAAAGTCATCAAGCCAAAATTTCCTATCAATATAGAACTGAATAAGCCAGCGCTGGACCATTTTCATAAAACTGTAGACATGAATATACGATCAATGCTTTGGGATCCATGTGGTTCAAGTGAAGTGAACTGGAACAATCTGAAAAAGGTTGTACTGGATACGGCTAAACAAAGCAGAGATCTACACAAAGCAGTTCCTAAACATGAAGAATGGATTAGCAAGGAGTCTACTCGGAGAGACAGAGATGAGCACATCAATAATATGTGTGAAGAAATTGAGGGACATGCTGATAAAGTGCAGACTAAGGACCTTTTCCTGAAAGTGAAGCAGCTAACAGGTGTCTTCAAGCCGAAGAAATGGATTATCGAAGATAGTAGAGACCACCAGATACCGAGAGAACAGACTGGTTTTGTAGCTGGAAAAGGAACTCGCGAGCAAATTTTGAACGTCCGAGTGCTCATTGAGAAATTTCGCGAGTTTAACAAGCCTCTGGTGCTATGCTTTATAGATTATGCGAAGGCGTTTGACTGTGTTCGGTGGAGTAGCATGTTTGATGTGTTAATTGATATGGGCGTTCCTTCTCATCTCACACTATTGATACGGAATCTGTACCTTGATGGTTCTTGCTTCGTGAAACTGGATAATCGAGGATCTAAACCCTTCCATACAGAACGTGGAGTACGTCAGGGCTGCATTCTGTCACCCAAATTATTTAATATCTACGGCGAATACATAATGAGAAGAGCACTTGAAGGCTGGAATGGCGGTATTTCCGTGGGCGGTGAAACACTCACGAACCTGAGATACGCTGACGACACTACCATGCTTGCATCAGATGAGGAGGAAATGGCAATTCTGCTGAACCGTGTGGAAGAAGAAAGTGCTAAACTCGGTCTTAAAATCAACCACTCCAAGACCAAAATAATGATAATAGATAGAGCGCAACTTCTTCCACGTTCTGATGCACTCAGTGGCTACGAGAAAGTAGCAGAATTCATATATCTTGGGTCGCAAATAACATCCGAGGGTGGCTGCATGGGGGAGATACGCCGAAGATCCGGAATGGCTAAAAGTGCGATGGCCAATCTCAGGAAGATATGGAAAAATCGTAGCATCCGATGTATAACCAAAGTGCGCTTGGTGCGGGCACTGATATTTCCCATATTCCTCTACGGGGCGGAGACATGGTGCATAAAAAGCCGGGATATCAAAAAGATCGCGATGCCTTTGAAATGTGGGTGTGGCGGAGGATGCTGCGAATACCGTGGACTGCCATGCGAACAAACGAGTCCATTCTAA
Protein
MSCNPTDPRRHSDPGSHGGKYATGHCTVDHQVGSGNYATGDVTGKSKTQLRKYLRMGTWNVRGMLKPGKQEVIEREMLRCKIDILGLSEVHRRGSGHIKTANGNILYFSGSENHSGNGVAIILPQKLESSVLGYKTPSDRIIAVKLDARPVPINIVQVYAPTSQSEEIISDQFYFELDDLLRTIPSKEVTVVCGDWNAKVGTTRGDVLLGATVGNFGLGVRNDRGEKFLQFCVENQLVIMNTWFEHHPRRLYTWISPCGHRNQIDYITIKSRWRSSVLNTKTLPGADCGSDHQLVVADFRLRLKVIKPKFPINIELNKPALDHFHKTVDMNIRSMLWDPCGSSEVNWNNLKKVVLDTAKQSRDLHKAVPKHEEWISKESTRRDRDEHINNMCEEIEGHADKVQTKDLFLKVKQLTGVFKPKKWIIEDSRDHQIPREQTGFVAGKGTREQILNVRVLIEKFREFNKPLVLCFIDYAKAFDCVRWSSMFDVLIDMGVPSHLTLLIRNLYLDGSCFVKLDNRGSKPFHTERGVRQGCILSPKLFNIYGEYIMRRALEGWNGGISVGGETLTNLRYADDTTMLASDEEEMAILLNRVEEESAKLGLKINHSKTKIMIIDRAQLLPRSDALSGYEKVAEFIYLGSQITSEGGCMGEIRRRSGMAKSAMANLRKIWKNRSIRCITKVRLVRALIFPIFLYGAETWCIKSRDIKKIAMPLKCGCGGGCCEYRGLPCEQTSPF
Summary
Uniprot
Proteomes
Interpro
SUPFAM
SSF56219
SSF56219
Gene 3D
ProteinModelPortal
Ontologies
GO
PANTHER
Topology
Length:
735
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.80988
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00194
outside
1 - 735
Population Genetic Test Statistics
Pi
255.315836
Theta
150.697066
Tajima's D
3.294529
CLR
16.071578
CSRT
0.989650517474126
Interpretation
Uncertain
