Gene

KWMTBOMO12427  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012448

Annotation

PREDICTED:_uncharacterized_protein_LOC106143320_[Amyelois_transitella]

Location

Bomo_Chr21(+):3103952-3115763      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.711

CDS

ATGAACAGAAACATCTTTAAACATTCGAAACAGAGAACTCAGTCAAGCCAGAAAACGCAAGATTACCAAAATCCGGTACAGCAAGCCGAGCAATCGCACCAGTCGCAGCCGCAAATGAACGCGAACACCGCAACGGAGCAAACGAGCGACGCCCAAAGCTCGAAACATGAAACATACGGACTCAGTTTGAACTTTTTGGAGTCTTTGAACATAAAGCTGCCGTTACTAAACAAGATCTTCATTGGGAACCTGGACGTCTTGGTTACGGAGTCGAAGCTGCGCGAGGTGTTCGGCTACTGCGGACAAATAGTCAGCTGCTCGATAATAGTCAAGGATGACAAGCTGTCTCGGTACATGGCCAAAATTGAATACGACCACCCGGTGGAGGCTGTGCAGGCAATCGCGATGCTAAACAGACAAGAGCTTTACAACAAACGGATGTTGGTCCAGATGGACACCGCGCCGCGTCCGTTCCCAAACAACCTTCCGAACGGTCTGGGCGGCTTCGGCCCGGGCCTGGGCGTCGACGGCGAACCCCTCAGGGGCGTAAGAGTCCACCTCGAGATGCGGCCCATCAAGCAACTCCTCGAAAACTTGAAGGAAGACATACAAAAGCAGAATCAGGTTAACGATCTGAACAAATACAAAGAGATGCAGAATGCAAACAGTGGCTTCGAGGCCGTCGTCCAGCAGCAGGTCGCGCCGGTCCTCAACCAAGCTCAGATACCGGTCATGGTGCAGCCGTTCACGAACCAGACCTTCGTTGCCGTGCCCCAAATGAAGACCAGCGCCGCTCAGATGCAGGCGGCCACTGAATACGGCCTGGCCATGATGAACGCCCAGCAAGTGTCGCGCTGGGACCAGACCAGCGCGCAGTGGAACGTCATCCAAACTAAGCAGTTCGAAGACACCTCGGCACTCGATGGTAACTACAGCAGGCAGGCGGTCGACGATAAGCGAGACAGCAGGGCCGCCCCCTCCGCGCAGTCCGTACACGCATTTGAATCTGACAACACCAAGCAATCGACCAGCATGGTGGTCTTTAGTTATCTGCCTCCGAGCGTGGACCTCCAGGCCCTCAGCAACAAGATGCGGGAGGTCGGCGAGGTGAAGTTCGTGGATGTGCTGGGCATGGGTCGGGCGATCGTCAGCTTCTTCAACGTGCGCGACGCCGAGCGTTGTGTCAAATTCTTTGACGGCTCCAAAGTGGACGGACAGACTATTGAAGTGAAGTACTTCTGA

Protein

MNRNIFKHSKQRTQSSQKTQDYQNPVQQAEQSHQSQPQMNANTATEQTSDAQSSKHETYGLSLNFLESLNIKLPLLNKIFIGNLDVLVTESKLREVFGYCGQIVSCSIIVKDDKLSRYMAKIEYDHPVEAVQAIAMLNRQELYNKRMLVQMDTAPRPFPNNLPNGLGGFGPGLGVDGEPLRGVRVHLEMRPIKQLLENLKEDIQKQNQVNDLNKYKEMQNANSGFEAVVQQQVAPVLNQAQIPVMVQPFTNQTFVAVPQMKTSAAQMQAATEYGLAMMNAQQVSRWDQTSAQWNVIQTKQFEDTSALDGNYSRQAVDDKRDSRAAPSAQSVHAFESDNTKQSTSMVVFSYLPPSVDLQALSNKMREVGEVKFVDVLGMGRAIVSFFNVRDAERCVKFFDGSKVDGQTIEVKYF

Uniprot

H9JSD7   A0A3S2L1N0   Q6A1B2   A0A1L8DHC4   A0A336KI76   A0A1B0CDB7   + More
E0VRJ5   A0A1W4W7F8   A0A0K8SD09   A0A0A9Z8R1   A0A2S2P2H5   J9JNJ2   A0A443SVL2   A0A2H8THC2   A0A0V1D1M5   A0A0V0WES0   A0A0V1LQ04   A0A0V0WGA6   A0A0V0TY60   A0A0V0ZPA9   A0A0V0ZQM3   A0A0V1D2W8   A0A0V1LPP7   A0A0V0WF54   A0A0V1B424   A0A0V0TYA2   A0A0V0S927   A0A0V0WEI8   A0A0V1NY09   A0A0V1NYI4   A0A0V1JGY8   A0A1I7RY81  

Pubmed

19121390    15781475    20566863    25401762    26823975    21909270    + More

EMBL

BABH01033809    BABH01033810    BABH01033811    RSAL01000243    RVE43614.1    AJ785003    + More
CAH05070.1    GFDF01008226    JAV05858.1    UFQS01000451    UFQT01000451    SSX04149.1    SSX24514.1    AJWK01007642    DS235478    EEB16001.1    GBRD01014644    JAG51182.1    GBHO01003308    GBHO01003307    GDHC01005897    JAG40296.1    JAG40297.1    JAQ12732.1    GGMR01011011    MBY23630.1    ABLF02010835    NCKV01000130    RWS31562.1    GFXV01001644    MBW13449.1    JYDI01000057    KRY55330.1    JYDK01000153    KRX74191.1    JYDW01000018    KRZ61452.1    KRX74195.1    JYDJ01000106    KRX43979.1    JYDQ01000116    KRY14456.1    KRY14458.1    KRY55331.1    KRZ61451.1    KRX74194.1    JYDH01000121    KRY31324.1    KRX43980.1    JYDL01000026    KRX23196.1    KRX74193.1    JYDM01000078    KRZ88889.1    KRZ88888.1    JYDU01000134    JYDR01000090    JYDS01000060    JYDV01000099    KRX91586.1    KRY69430.1    KRZ28272.1    KRZ34174.1   

Proteomes

UP000005204    UP000283053    UP000092461    UP000009046    UP000192223    UP000007819    + More
UP000288716    UP000054653    UP000054673    UP000054721    UP000055048    UP000054783    UP000054776    UP000054630    UP000054924    UP000054632    UP000054805    UP000054815    UP000054826    UP000095284   

PRIDE

H9JSD7   

Pfam

PF00076   RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       

SUPFAM

SSF54928   SSF54928       

Gene 3D

3.30.70.330    

ProteinModelPortal

H9JSD7   A0A3S2L1N0   Q6A1B2   A0A1L8DHC4   A0A336KI76   A0A1B0CDB7   + More
E0VRJ5   A0A1W4W7F8   A0A0K8SD09   A0A0A9Z8R1   A0A2S2P2H5   J9JNJ2   A0A443SVL2   A0A2H8THC2   A0A0V1D1M5   A0A0V0WES0   A0A0V1LQ04   A0A0V0WGA6   A0A0V0TY60   A0A0V0ZPA9   A0A0V0ZQM3   A0A0V1D2W8   A0A0V1LPP7   A0A0V0WF54   A0A0V1B424   A0A0V0TYA2   A0A0V0S927   A0A0V0WEI8   A0A0V1NY09   A0A0V1NYI4   A0A0V1JGY8   A0A1I7RY81  

PDB

2DO0     E-value=4.48984e-09,     Score=146

KEGG

101743393    no KO assigned | (RefSeq) uncharacterized LOC101743393

GO

GO:0003723   GO:0003676   GO:0000166   GO:0016020   GO:0006811   GO:0004889   GO:0005216   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Length:

413

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0201

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.03081

outside

1  -  413

 

 

Pi

188.794842

Theta

159.600828

Tajima's D

0.143949

CLR

0.209756

CSRT

0.405129743512824

Interpretation

Uncertain