SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12421
Pre Gene Modal
BGIBMGA012417
Annotation
hypothetical_protein_KGM_05804_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.285 Nuclear   Reliability : 1.188
 

Sequence

CDS
ATGTACCTGCCTATATTTCTGTTTGCCTTCGCGTCTCTGAGCGAAGGGAACCGACAAAAAAGATACCTAGTCTACCCGGACGGAGGCCCAGCGAGAGCTCAGTTCATCATTGGTGTCGGTATACCAGTCGATTTGAAAGAGGCGTCCGTAACCGTTGGCACTGTAATCAAATTCCAATATGATTTACCAACAAACAGTACAGAATATACCAGCCGTATTTACGGATTTGCTAGTACCGTATCAAGAGACATGAATGGTGATACACCCGATAAGAGCGTAAAAATAGCCGATGATGATACATCTACTGTAGAGGATAATAATGAAATCGAAACATTAAGACATTTAGATGAAGAAAATAGTTTAGACGATGAGACAGATAATGAAAACAATACATTGATCGACATTACTTTCGATGACAGACGCAAGAGATCTTTAATTTATTCTGAAGGTGGAATTTTAAATGCTGATGATGACGATAGTACAGAATTGCCCTTAGAAGAAGCTATACGAAGACAGGAGTTGATAGACAAAAATAATTTAGAAGAAGAAGAAGAGCCTCAGAGAATGAATCGATGGGACTTCTATAAGATTTTGGAGCATATGGTGGAGAGATACGGGTACACGGGTCGACCCTGCCTTCTTCGAACAATCTGCGAGGCTGCCGAGGTTCCCTTTACACACGAGAACGGCTTGCTAGGTGAAATTGGACATATACTATTCACACCGTCGACAACAAGAGACAGTCTCTCCCATCATACCGACAACGAATATCATGCCGCAGAGCGTCTCGGTAGAGAAGCAGGAGGGAATTGCGAAAATATCTTCCCAGAGTGCGAGGGCTCTGTCTTAGATACGTTCACGAGAATCGGCGTTGATACTTTGCATAAATTCGGAATTTTCACTTAG
Protein
MYLPIFLFAFASLSEGNRQKRYLVYPDGGPARAQFIIGVGIPVDLKEASVTVGTVIKFQYDLPTNSTEYTSRIYGFASTVSRDMNGDTPDKSVKIADDDTSTVEDNNEIETLRHLDEENSLDDETDNENNTLIDITFDDRRKRSLIYSEGGILNADDDDSTELPLEEAIRRQELIDKNNLEEEEEPQRMNRWDFYKILEHMVERYGYTGRPCLLRTICEAAEVPFTHENGLLGEIGHILFTPSTTRDSLSHHTDNEYHAAERLGREAGGNCENIFPECEGSVLDTFTRIGVDTLHKFGIFT

Summary

Pfam
PF07841   DM4_12
Interpro
IPR006631   DM4_12        + More
IPR000095   CRIB_dom       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.974674
 
 
Length:
301
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00122
Exp number, first 60 AAs:
0.00122
Total prob of N-in:
0.00131
outside
1  -  301
 
 

Population Genetic Test Statistics

Pi
230.278618
Theta
171.525794
Tajima's D
1.147511
CLR
0.19139
CSRT
0.698815059247038
Interpretation
Uncertain
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