SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12407  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012425
Annotation
PREDICTED:_uncharacterized_protein_LOC101742340_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.554
 

Sequence

CDS
ATGAATTTTGTGATCGTTTTCGTTGTAGCATTGTGTGGGGTACAGTCGATCGAAGAGATATCGATAAGCGAAACTGATAATCAATATACGACAAGGCAAAGAGTAGCGAGACATTGGAATTGGGATTGGGATTATCCAGTAGAACCGTTTTATATTCCAAATCAGTTATCACCACCTGCAGAAAGCGTAGGAAATGAAATTCATATCACTACAATAAATTTAGCTCCGGTGATCTTAATTGATGATAACAAAGAAACTATACGAGTGAACTTCGGAGCAGAAGTGGAATCTACCAGGAGCTTTTTCATCTTGCCATTTGAAGATATAATTACTGCGCCGATTTCAAAAGATGGACTACAGAATATAACCTTCAATCTGTTAATAAACCACAATTATTACCAGAACGGTTTGGGTATTCAACCAAAAGCCACCATTGAATCTAATACAGGAAAAAAGCTGAACGAAAATGAAGATCTGAAGAAAGACGATTTCAATTTCGAAAGCAGAGACTCAGAATCGAATGTGCCTGAAGAAGTAAATAATTATACCACCACAGAGAACAAAAGCTATTTGGATAAAGATAAACGAAAGAATAATTTAGTATTTTTGGGTGTAGAAGAAAATGGAAAAAGAGAAATAGATCTCGTAGAATACATAGTGAAGATTATCGTAGAAGCAGGCACCTCTCTAGACTGTCAAGAAGTAAGTAATATTTATAGAATCGGTGCATCACCTACTAAAAGCCGCCCGATAATAGGGACCTTTAGGACTACATGGAAAAATAATCTTATACTCAAAAACAAAACTAACCTTCCACAAGGCATCTACGTGAAAGAAGACTATTCAAAAAGCGTCCTAGAAACGAGGAAACAATTACAACCGAAAGTAGAAGAAGAACGAAAGAAGGGAAACATCGCATATTTGAAGCACGACAAATTGGTAGTAAAGAAACCATACGAGACCGGCCGAGAAAAAAAGGAAAAGAGAACGTTCCCATTTCCAGTGTGCACAACCATTGAACAATCTGGAAACCTTTTAACTTTGAAGAAGCGGACGAGAAGAAAAATTGCAGAAGACGATTGGATCTGGAGTACTACCAAAAGTCCGACTGCAGATAGAATAATGCCGAATTCAGAAGGTACAAATGCAACACAAGCTGTATTTCCGGTTCGTTCTACTCCAAGCGCGTCCACGATGGTCTCCAGCCAGCCTTTAATAATGGCAGAGGGCACAGCGTCACCAAATGTTACGCTTACACCGCAAGACTTGATTTATAAGAAATGTATTTCAGAATTGGAAACTTTGGTAATGCCAGATTACCGACAGAATAACCGACCGTACAGTGACGTCCGATGCAGAGAAAATTATTGGTTTGCTGAGGCAACAAACACTCGGCAATATCTGGTGAGAGAATGCGAATTCAAAGCTTACAACATCCGCTACTACGTCGGTGGCAGGGACACATATCTAGGAGAATTCCCGCATATGGCTGCTCTTGGATGGAAGACCTGGCTGGGTACATGGGCATTCAAGTGCGGCAGTACGCTGATCAGTCACAAGTTCCTGCTAACCGCAGCGCATTGTTCACGAGCCTCAGAAACTGACACAGAACTTGCTGATCCGGTTCCGCAGATTGTTAGAGTTGGGATCAAAAACCTAGGACCTACGTTTGTAGGCCTCACCAGCTTCGTGTACCCTAATGAGCAAGGTCGCAAAAACACTTCTTTCATGGAAAATCCTGTTGCGATTTTCGCCTTGGAGCAAGGAATAGATTTCGAAATCAAGCAAATAATAGTGCATCCTAATTACAAATCTCCTGAAAAATATTTTGATATTGCCCTAGTAGAATTGAAAAAGGAAGTAACGTACACTCCTACTTTATATCCAGCCTGTCTCTGGACTGAACCTAATCTTGATAAACTAGGAAAGAGTTTTGTAGGTACCGGTTGGGGTGTGGTACGAGAAGACGACAATAAAATATCCCCCGAACTCCAAGCTGCAGATTTGGATCTCATAGATTCGAAAGTTTGTGATGAATTGTTGTCCAAACATCATAGTAGAAACTGGTGCGGATTGTGGGAAAATCAATTTTGTGCAGGAAAACTGGAAGGAGGAGTAGACTCTTGTCAGGGTGATTCAGGGGGTCCACTGCAGAAAATGCTCCAAAACTCTCCTAAACCATACCATATGTACTATGTTGTTGGAGTAACATCGTTCGGAGTTGGATGCGGGCGTAAAGACCTACCTGGTGTCTTCACGAGGGTGTCTAGTTTCATCAAGTGGATTGAAGATACAGTTTGGCCCCCAAACACGAGACAATATGTTCCGCAATACATTAAACCAGTTTAA
Protein
MNFVIVFVVALCGVQSIEEISISETDNQYTTRQRVARHWNWDWDYPVEPFYIPNQLSPPAESVGNEIHITTINLAPVILIDDNKETIRVNFGAEVESTRSFFILPFEDIITAPISKDGLQNITFNLLINHNYYQNGLGIQPKATIESNTGKKLNENEDLKKDDFNFESRDSESNVPEEVNNYTTTENKSYLDKDKRKNNLVFLGVEENGKREIDLVEYIVKIIVEAGTSLDCQEVSNIYRIGASPTKSRPIIGTFRTTWKNNLILKNKTNLPQGIYVKEDYSKSVLETRKQLQPKVEEERKKGNIAYLKHDKLVVKKPYETGREKKEKRTFPFPVCTTIEQSGNLLTLKKRTRRKIAEDDWIWSTTKSPTADRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCISELETLVMPDYRQNNRPYSDVRCRENYWFAEATNTRQYLVRECEFKAYNIRYYVGGRDTYLGEFPHMAALGWKTWLGTWAFKCGSTLISHKFLLTAAHCSRASETDTELADPVPQIVRVGIKNLGPTFVGLTSFVYPNEQGRKNTSFMENPVAIFALEQGIDFEIKQIIVHPNYKSPEKYFDIALVELKKEVTYTPTLYPACLWTEPNLDKLGKSFVGTGWGVVREDDNKISPELQAADLDLIDSKVCDELLSKHHSRNWCGLWENQFCAGKLEGGVDSCQGDSGGPLQKMLQNSPKPYHMYYVVGVTSFGVGCGRKDLPGVFTRVSSFIKWIEDTVWPPNTRQYVPQYIKPV

Summary

Uniprot
ProteinModelPortal
PDB
3W94     E-value=3.23282e-32,     Score=349

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.996260
 
 
Length:
782
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.27114
Exp number, first 60 AAs:
0.04107
Total prob of N-in:
0.00218
outside
1  -  782
 
 

Population Genetic Test Statistics

Pi
170.463009
Theta
163.125206
Tajima's D
-1.136744
CLR
219.843592
CSRT
0.115394230288486
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 SFVGTGWGVVR 100.00 3e-05
29197581 CISEIETIVMPDYR 100.00 4e-04
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