Gene

KWMTBOMO12394

Pre Gene Modal

BGIBMGA012432

Annotation

PREDICTED:_clavesin-2-like_isoform_X1_[Papilio_polytes]

Location

Bomo_Chr21(-):2082487-2088506      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.307 PlasmaMembrane   Reliability : 1.85

CDS

ATGCCGTTCATTGACATCGCCTTCCAAGCCGAACTAAGCCGATACGAAGACCCGGAGTTTGAAGAGTACGCCAAGAAGAATTGTAACGAATTCCCTGACACTAGGCATAAAGTAATCGAGGAGCTACGCCGCATGGTCCGCGAACGAGGTGAATGTATCCCTCGGCGCGTTGACGACGCATACTGTCTCAGATTTCTTCGATGTCGGCGGTTTATTCCTGCGTTAGCTCACAAATTGATGGTGCGTTACGAAGACTTTCGCCAAAAAAACGCGTACCTGTACAACTGTGACCCGTTTGGACTACAACGAGTTAAAAACGTCTACGGAGGTACTTTACCCGAAAGTCCGGAAAATGGAAGAATAGTTCTTATGAGGTTCGGACGCTGGGATCCCAGTGCTGTGCCGATCGAAGACGTGGTTCGTTGCGCCCTGTTCATGGATGAAATTGCTGTGATGCAGCCAAAACTACAGATCCTGGGCGTGACCATCATCGTAGACCTCGATGGGTTGAGCATCAGACACGTGAGGCATTTGACTCCGACAGTTGCCTACCAGATTGTCAGTCTTATGGGAGTTTCATTCCCGTTGGCGATGCACGGCCTCCACATCATAAACTACAACTGGATCTTGAATTCTGTGTTCTATTTGTTTAAACAATTTATACCGGCTGCAGTATGGAGCCGCCTGCATTTTCACGGCTCGAACATGGAATCACTCCACAAGTTCATACAGCCCCAGTACTTGCCACCCGAGTATGGGGGCAGTTGCAGACACATCATCTCGACTGAAGAATGGATCGCTAAGATCTATAGATACAAAGATGATTTCCTGATAGAAGAATTAAGAGATTTAGGTTTTTACGTTACATAG

Protein

MPFIDIAFQAELSRYEDPEFEEYAKKNCNEFPDTRHKVIEELRRMVRERGECIPRRVDDAYCLRFLRCRRFIPALAHKLMVRYEDFRQKNAYLYNCDPFGLQRVKNVYGGTLPESPENGRIVLMRFGRWDPSAVPIEDVVRCALFMDEIAVMQPKLQILGVTIIVDLDGLSIRHVRHLTPTVAYQIVSLMGVSFPLAMHGLHIINYNWILNSVFYLFKQFIPAAVWSRLHFHGSNMESLHKFIQPQYLPPEYGGSCRHIISTEEWIAKIYRYKDDFLIEELRDLGFYVT

Uniprot

H9JSC1   A0A194RAC5   A0A194PVS2   A0A2H4RMP6   A0A2W1BVU1   A0A1E1VYH6   + More
A0A212F3L1   A0A2H1VEG3   A0A2A4JBT7   A0A1E1WU69   A0A437B2L8   A0A2A4J0W6   I4DLF8   A0A194PWG0   A0A2H4RMQ8   A0A194R9D4   A0A2H1V8Z2   A0A0S2Z3F3   H9JSD0   A0A212FK12   A0A0L7LCR3   A0A2H4RMU7   A0A2A4JCS5   A0A3S2NDL1   A0A0S2Z371   A0A2H4RMQ9   H9JSC0   A0A212EYW0   A0A2W1BQN2   A0A3S2LZG7   H9J0U5   S4PDY3   A0A2H4RMR4   A0A2H4RMU9   D6WK77   A0A0S2Z2X8   K7J584   A0A2J7PEI5   A0A437BEE0   A0A2A4J639   A0A1Q3FJS7   A0A151XFF6   A0A2C9H8Q1   A0A182U9P9   A0A182USL8   B0WIP9   E2C3S6   A0A453YJS9   A0A1S4H0R7   A0A1S4JIR2   A0A158NHN1   A0A212FFX7   A0A182QDV4   A0A2P8Y1N2   E9J2R5   A0A195D4M7   A0A182KCU4   A0A084VM70   A0A2M4BVL7   A0A182M7C8   A0A195AZZ6   A0A2H1WVH3   A0A2M4BVI7   A0A182SLW3   A0A1B6CWG4   A0A088A1P4   U5EUI3   F4WD80   A0A195EF31   A0A0M8ZXJ1   T1DG07   A0A182L6I3   A0A088AQZ8   A0A182JEP7   A0A2M3ZAW7   D6WK78   A0A0L7QVN0   E2B175   A0A195FWL3   A0A1Y1KBD3   W5JFN1   A0A1Y1KBD8   A0A2M4ADQ0   A0A2M4ADP7   A0A182YNG9   A0A194PPJ0   A0A1B6EH81   A0A1Y1MAD0   A0A0C9RS57   A0A1Y1M6Q3   D6WK79   A0A154PSY4   A0A069DR99   A0A182P9H0   E0VDE6   A0A1L8DYZ0   A0A026WVT7   A0A182VUK4  

Pubmed

19121390    26354079    29136137    28756777    22118469    22651552    + More
25684408    26227816    23622113    18362917    19820115    20075255    20798317    12364791    21347285    29403074    21282665    24438588    21719571    20966253    28004739    20920257    23761445    25244985    26334808    20566863    24508170   

EMBL

BABH01033696    KQ460473    KPJ14454.1    KQ459591    KPI97093.1    MG434596    + More
ATY51902.1    KZ149932    PZC77317.1    GDQN01011268    JAT79786.1    AGBW02010560    OWR48321.1    ODYU01002128    SOQ39228.1    NWSH01001963    PCG69557.1    GDQN01000489    JAT90565.1    RSAL01000188    RVE44746.1    NWSH01004188    PCG65376.1    AK402126    BAM18748.1    KPI97094.1    MG434606    ATY51912.1    KPJ14453.1    ODYU01001300    SOQ37320.1    KT943565    ALQ33323.1    BABH01033702    BABH01033703    BABH01033704    AGBW02008159    OWR54085.1    JTDY01001677    KOB73179.1    MG434665    ATY51971.1    PCG69556.1    RVE44745.1    KT943561    ALQ33319.1    MG434615    ATY51921.1    BABH01033697    AGBW02011436    OWR46676.1    OWR48320.1    PZC77318.1    RSAL01000098    RVE47627.1    BABH01010352    BABH01010353    GAIX01004762    JAA87798.1    MG434618    ATY51924.1    MG434649    ATY51955.1    KQ971342    EFA03949.1    KT943556    ALQ33314.1    AAZX01000350    NEVH01026096    PNF14739.1    RSAL01000077    RVE48770.1    NWSH01003077    PCG66994.1    GFDL01007164    JAV27881.1    KQ982194    KYQ59109.1    DS231951    EDS28626.1    GL452364    EFN77312.1    APCN01004215    AAAB01008835    ADTU01015717    AGBW02008751    OWR52636.1    AXCN02000844    PYGN01001044    PSN38167.1    GL767998    EFZ12889.1    KQ976870    KYN07796.1    ATLV01014581    KE524975    KFB39064.1    GGFJ01007958    MBW57099.1    AXCM01005439    KQ976694    KYM77615.1    ODYU01010971    SOQ56414.1    GGFJ01007959    MBW57100.1    GEDC01019442    JAS17856.1    GANO01002311    JAB57560.1    GL888086    EGI67807.1    KQ979039    KYN23459.1    KQ435803    KOX73150.1    GAMD01002946    JAA98644.1    GGFM01004847    MBW25598.1    EFA03950.1    KQ414725    KOC62670.1    GL444799    EFN60567.1    KQ981208    KYN44838.1    GEZM01087248    JAV58822.1    ADMH02001356    ETN62876.1    GEZM01087247    JAV58823.1    GGFK01005595    MBW38916.1    GGFK01005593    MBW38914.1    KQ459598    KPI94649.1    GECZ01032471    JAS37298.1    GEZM01038761    JAV81520.1    GBYB01011455    JAG81222.1    GEZM01038762    JAV81519.1    EFA03951.1    KQ435050    KZC14220.1    GBGD01002291    JAC86598.1    DS235073    EEB11402.1    GFDF01002447    JAV11637.1    KK107109    EZA59219.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000283053    + More
UP000037510    UP000007266    UP000002358    UP000235965    UP000075809    UP000076407    UP000075902    UP000075903    UP000002320    UP000008237    UP000075840    UP000005205    UP000075886    UP000245037    UP000078542    UP000075881    UP000030765    UP000075883    UP000078540    UP000075901    UP000005203    UP000007755    UP000078492    UP000053105    UP000075882    UP000075880    UP000053825    UP000000311    UP000078541    UP000000673    UP000076408    UP000076502    UP000075885    UP000009046    UP000053097    UP000075920   

PRIDE

H9JSC1    H9JSD0    H9JSC0    H9J0U5   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N
PF05267   DUF725

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR007931   TsetseEP       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JSC1   A0A194RAC5   A0A194PVS2   A0A2H4RMP6   A0A2W1BVU1   A0A1E1VYH6   + More
A0A212F3L1   A0A2H1VEG3   A0A2A4JBT7   A0A1E1WU69   A0A437B2L8   A0A2A4J0W6   I4DLF8   A0A194PWG0   A0A2H4RMQ8   A0A194R9D4   A0A2H1V8Z2   A0A0S2Z3F3   H9JSD0   A0A212FK12   A0A0L7LCR3   A0A2H4RMU7   A0A2A4JCS5   A0A3S2NDL1   A0A0S2Z371   A0A2H4RMQ9   H9JSC0   A0A212EYW0   A0A2W1BQN2   A0A3S2LZG7   H9J0U5   S4PDY3   A0A2H4RMR4   A0A2H4RMU9   D6WK77   A0A0S2Z2X8   K7J584   A0A2J7PEI5   A0A437BEE0   A0A2A4J639   A0A1Q3FJS7   A0A151XFF6   A0A2C9H8Q1   A0A182U9P9   A0A182USL8   B0WIP9   E2C3S6   A0A453YJS9   A0A1S4H0R7   A0A1S4JIR2   A0A158NHN1   A0A212FFX7   A0A182QDV4   A0A2P8Y1N2   E9J2R5   A0A195D4M7   A0A182KCU4   A0A084VM70   A0A2M4BVL7   A0A182M7C8   A0A195AZZ6   A0A2H1WVH3   A0A2M4BVI7   A0A182SLW3   A0A1B6CWG4   A0A088A1P4   U5EUI3   F4WD80   A0A195EF31   A0A0M8ZXJ1   T1DG07   A0A182L6I3   A0A088AQZ8   A0A182JEP7   A0A2M3ZAW7   D6WK78   A0A0L7QVN0   E2B175   A0A195FWL3   A0A1Y1KBD3   W5JFN1   A0A1Y1KBD8   A0A2M4ADQ0   A0A2M4ADP7   A0A182YNG9   A0A194PPJ0   A0A1B6EH81   A0A1Y1MAD0   A0A0C9RS57   A0A1Y1M6Q3   D6WK79   A0A154PSY4   A0A069DR99   A0A182P9H0   E0VDE6   A0A1L8DYZ0   A0A026WVT7   A0A182VUK4  

PDB

3W68     E-value=1.96528e-29,     Score=320

KEGG

101741908    no KO assigned | (RefSeq) clavesin-1-like

GO

GO:0016787   GO:0005215   GO:0005622   GO:0006810   GO:0003676   GO:0006281   GO:0043140   GO:0006310   GO:0000049   GO:0005975   GO:0004553  

Length:

289

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.68047

Exp number, first 60 AAs:

0

Total prob of N-in:

0.05908

outside

1  -  289

 

 

Pi

250.448668

Theta

223.783871

Tajima's D

-0.607616

CLR

22.077935

CSRT

0.218339083045848

Interpretation

Uncertain