SGID The Silkworm Genome Information Database
Gene
KWMTBOMO12385  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014083
Annotation
PREDICTED:_metaxin-1-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.43
 

Sequence

CDS
ATGGCTAACATTGAATTAGACATTTGGAGAGGAGAATGGGGTCTAGCATCTATCGATTTAGAATGTTTAAAAGTATTAACTTACATGAAATTTATCGGTGTGCCTGTTAAAGTGAGAGAGTCGAATAACCCATTTTTCACCCCCAAAGGTCGACTTCCTGTCATGAGAGATGGACGGACCGTTCTTACAAATTTTGAAGAAGTAGTAGAACATTTGAAATCTCTACATTACAACACAGATGTACATTTAAACTCCAAAGAGGCAGCGGAAGCGAGTGCATTCACACAATACCTCCGAGACAAGTTATACCCAGCTTACCAGTATGCTTGGTGGGTGGATGAAAAGAATTACAATGATGTAACTAGGCCAACATTTGCAAAATGTTTGAGAATTCCATTTAATTTTTTTTATCCATCACGGTATCAGAATGCCGCCAAAGAAATGATAGACGCATTGTATGGAGAACATACTGATCTTAGAGAAATAGAGAAAACTATATACAGTGAAGCTGAGAAGTGCCTTAAAACATTATCAGATAGATTAGGTGAGAGTGAATACTTCTTTGGAAACCGTCCTTCATCGTTTGACGCTATTGTGTTTGCTTACTTAGCTCCTTTAGTGAAAGCACCATTTCCTAATGGGACTCTGTCAAACCATGTCAAAGGCACTGCAAATTTGGCAAGATTTGTGGCCAGGATCAATCAGAAAAATTTTAGACACGTCACAGATGAATATAATAAACAGAATGCAAAGAAACAGTCCACAGGCTCGCAGTCTGATAGAGAAGCCGCAAACTTTCCCAACCAGACTCGAAATAAAATCTTAGCAGCCCTGTTTGCTGCTATTGCTATGACGGGGTATGCAGTGGCTAATGGAATGTTTCAAGAGCTGAAAGACTTTGAGCACTCGCGAGATTACAATGAAATGTTTGAGAATGAAGAAGAGGACAACTGA
Protein
MANIELDIWRGEWGLASIDLECLKVLTYMKFIGVPVKVRESNNPFFTPKGRLPVMRDGRTVLTNFEEVVEHLKSLHYNTDVHLNSKEAAEASAFTQYLRDKLYPAYQYAWWVDEKNYNDVTRPTFAKCLRIPFNFFYPSRYQNAAKEMIDALYGEHTDLREIEKTIYSEAEKCLKTLSDRLGESEYFFGNRPSSFDAIVFAYLAPLVKAPFPNGTLSNHVKGTANLARFVARINQKNFRHVTDEYNKQNAKKQSTGSQSDREAANFPNQTRNKILAALFAAIAMTGYAVANGMFQELKDFEHSRDYNEMFENEEEDN

Summary

EMBL
BABH01042711    RSAL01000188    RVE44754.1    ODYU01007280    SOQ49913.1    GDQN01005333    + More
JAT85721.1    NWSH01001364    PCG71539.1    KQ459591    KPI97085.1    KZ149932    PZC77310.1    AGBW02011326    OWR46822.1    JTDY01000133    KOB78685.1    KQ460473    KPJ14463.1    KK852433    KDR23960.1    GEDC01026821    GEDC01005346    JAS10477.1    JAS31952.1    GEDC01026116    JAS11182.1    NEVH01007395    PNF35918.1    ADTU01026592    KQ981522    KYN40614.1    KQ976504    KYM82868.1    GDIP01246214    JAI77187.1    GDIQ01166441    JAK85284.1    GDIQ01007635    JAN87102.1    QOIP01000007    RLU20930.1    KQ977771    KYN00032.1    LBMM01008979    KMQ88489.1    DS235750    EEB16319.1    GL888285    EGI63220.1    KQ978660    KYN29395.1    GDIQ01150795    JAL00931.1    GECL01002319    JAP03805.1    JR047032    AEY60309.1    KZ288301    PBC28845.1    AK417190    BAN20405.1    KQ414657    KOC65786.1    GECZ01016689    JAS53080.1    GECZ01028274    JAS41495.1    GEBQ01024942    JAT15035.1    GEBQ01017289    JAT22688.1    GEBQ01023820    JAT16157.1    GDKW01002508    JAI54087.1    ACPB03021239    GAHY01002192    JAA75318.1    GDIQ01134104    JAL17622.1    GDIP01209451    JAJ13951.1    GBHO01004388    GBRD01012714    JAG39216.1    JAG53110.1    NNAY01001090    OXU25174.1    KK854153    PTY12259.1    GL439158    EFN67703.1    KQ435710    KOX79700.1    KK112616    KFM58101.1    AAGJ04113373    GACK01007436    JAA57598.1    GFPF01009691    MAA20837.1    GEDV01009272    JAP79285.1    GFPF01009692    MAA20838.1    GEFH01002317    JAP66264.1    KK107390    EZA51436.1    KB202719    ESO88232.1    ABJB010182666    ABJB011105958    ABJB011127826    DS863069    EEC14182.1    GADI01002358    JAA71450.1    GFJQ02007166    JAV99803.1    KQ427052    KOF67464.1    GFWV01020320    MAA45048.1    GFAA01000276    JAU03159.1    GBBM01001845    JAC33573.1    JO844346    AEO35963.1    GBZX01001581    JAG91159.1    NCKU01001272    RWS12576.1    NCKV01003647    RWS25498.1    GCES01004922    JAR81401.1    RQTK01001021    RUS72771.1    JH818826    EKC20634.1    HACG01005666    CEK52531.1    CP026258    AWP15880.1    AERX01026207    AERX01026208    GCES01036822    JAR49501.1    HADY01008176    HAEJ01003837    SBS44294.1    HAEB01007150    HAEC01011052    SBQ53677.1    HAED01015857    HAEE01004833    SBR02302.1    HAEH01007323    HAEI01008754    SBS05894.1    HAEF01014457    HAEG01004018    SBR70575.1    HADZ01011442    HAEA01005613    SBQ34093.1    HADW01015958    HADX01005981    SBP28213.1   
Pfam
PF17171   GST_C_6        + More
PF10568   Tom37
PF17906   HTH_48
Interpro
IPR033468   Metaxin_GST        + More
IPR036282   Glutathione-S-Trfase_C_sf       
IPR019564   Sam37/metaxin_N       
IPR010987   Glutathione-S-Trfase_C-like       
IPR040079   Glutathione_S-Trfase       
IPR017410   Metaxin       
IPR036388   WH-like_DNA-bd_sf       
IPR041426   Mos1_HTH       
SUPFAM
SSF47616   SSF47616       
Gene 3D

Ontologies

Topology

Length:
317
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.99665
Exp number, first 60 AAs:
0.03385
Total prob of N-in:
0.64294
outside
1  -  317
 
 

Population Genetic Test Statistics

Pi
148.897892
Theta
207.790854
Tajima's D
-0.858574
CLR
149.388894
CSRT
0.168841557922104
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 EAANFPNQTR 100.00 0.012
28556443 FVSSYILNESLK 100.00 0.012
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