Gene

KWMTBOMO12382

Pre Gene Modal

BGIBMGA012402

Annotation

PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]

Location

Bomo_Chr21(-):1766533-1778596      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.042

CDS

ATGTTTAGATGTCAAGCAGGGCGGGCGGAGGCTCTGGGTACCTTGTGCCGCGTGCTGTGCTCCAAGCAGTGCCGCGAGGAGGTGCTCGCGCCGTACCTGGCCCGCTGCTACGTGGCCATGCACCACGGCCTCAGGGACGCCGCCACCGCCGCCGCAGTCGTGCTCAACGCCTCCGACATATTCAGACTGGATCTAGACGGAGTACTAGTTTTAGTTCCGGACTTCATAAACGCTTTAGACAAGATTCTGTCGGAACGCGAGCCGAAGATCGAATGCGACTCCATAGACAAGCGGGAGCTCCGCAAGGCGGCCATCAGCATCCTGCTGTCTATGGTCGCGTTCCCGTACCACTACAAAGATCTACCCGTGCCAGAATTCCCAGGCTGTAATGAATATGCGGGCATGACGCTGGGCGAGCTGACCCGCGGCCGCATCGCCGTGATGTGCGTGTCGGGGGTCCAGGTCGAGTGGTCGGGCGCGCTGGCCGTGCCGCTGCTCAACGCTCTGTACTTGTGCGTGCGGCACAACGCGCTGGCGGCGCCCGCGCAGCCGCTGCCGCCTGACATGCGAGCTCGCTCAGAGAGCGGCAGCACGGAGGGGCACTCGCTCGACGACTTCGTGGCGGATGTTAGGGGGCTTGATCCATCCTCGCCTGTTTTCGGGGCAGCACTGGTTGTACGCGCCACGTATCTGGTCTGCCATCGATTGATATCCTCGTGGAAGGGAGAACTTCAGGTTTCTTTAGCTGCTTTAGAACTTTTATCTGGACTTGCCAAGCTGCATTCTTCTAAACCAGATGCGATCGAGCGCAAGCGCGCGGTCCGCTGGATATGCGACTACATCTCGGTGCAGTGCGGGCGGCCGCCGCAGGCACACTCGCGCGACCTGCACTCGTGCGTGGTGGCCGCCTACGGCTGTCTGTCGGCGTGGCTGTGCCCGGCGCTGCTGGCTGACCCCGACTGTCTGGCCACGCTCATGGAGGTCGTCGAGCTGGGCATCTCCGGCACCAAGAGCCAAGCCAAACCTGGTGACCCTCCAATGATGAAAGATGAAAAAGAACTGAAGCCGGTTTCGATGCGGGTCAGGGATGCTGCCGAATCCTTGTTGATGCAGATCTTAGAACAGCAAGTGGACAACGGCCTCAACGGCAACTGGTGCCGGCTGGACGAGCGCTGGCTGGCGGCGCTGGGGCACGGCAAGCTGCGCCACTTCATCGCCGACGGCAACATCATGCTGTCGCTGCTCGAGGAGCCGCTGGCCAACAGCCAGGAGCCGCAGCCCACGCTGGTCGTGATCATCCGTTGCGCGTGGGGTCGGTACGCGTGGTCGCTGAGCAGCCGGGGCGCGGCGCGGAGTGCGGGGCGCGGCGCGGGCGGCGCGTGCGCTCGGCCCGTGGACACGCGCCCGCCGCGCGCCCCCCCCGCGCCGCACTGCCGCCCGCTGCCGCCCGCGCCGCCCTGCGCGCTGTGA

Protein

MFRCQAGRAEALGTLCRVLCSKQCREEVLAPYLARCYVAMHHGLRDAATAAAVVLNASDIFRLDLDGVLVLVPDFINALDKILSEREPKIECDSIDKRELRKAAISILLSMVAFPYHYKDLPVPEFPGCNEYAGMTLGELTRGRIAVMCVSGVQVEWSGALAVPLLNALYLCVRHNALAAPAQPLPPDMRARSESGSTEGHSLDDFVADVRGLDPSSPVFGAALVVRATYLVCHRLISSWKGELQVSLAALELLSGLAKLHSSKPDAIERKRAVRWICDYISVQCGRPPQAHSRDLHSCVVAAYGCLSAWLCPALLADPDCLATLMEVVELGISGTKSQAKPGDPPMMKDEKELKPVSMRVRDAAESLLMQILEQQVDNGLNGNWCRLDERWLAALGHGKLRHFIADGNIMLSLLEEPLANSQEPQPTLVVIIRCAWGRYAWSLSSRGAARSAGRGAGGACARPVDTRPPRAPPAPHCRPLPPAPPCAL

Uniprot

A0A1E1WBH6   A0A2H1WA00   A0A3S2L1M2   S4PFT6   A0A2A4JHL1   A0A2W1BQM4   + More
A0A212EZF5   E2AUV9   A0A182Q2H7   A0A182HV79   A0A182TDZ2   A0A182UUU6   A0A182NE38   A0A182WT86   A0A182LVU3   A0A2M4A9E8   A0A182PJ71   W5J6S7   A0A182YGU5   A0A3L8DJ41   A0A182RBM0   A0A1Y9G8G0   A0A2M4B8Z6   A0A2M4B917   A0A2M4B944   A0A1Y1MFT6   A0A1Y1MBJ0   A0A453YTJ1   A0A151IFS4   A0A1S4GXG4   A0A2M3Z0Z3   B7Z138   A0A154PB09   A0A0R1EG05   A0A182GBS6   A0A182GR84   A0A1W4X266   A0A1W4XCZ0   A0A1W4XBM7   A0A195FKP4   A0A1W4VVG0   A0A195BFG5   A0A1W4VHC1   A0A1W4X2A4   A0A0N1IT18   A0A2A3ED95   A0A1Q3FDF3   A0A0R3P398   A0A0T6AVE8   A0A1Q3FD58   A0A088ANE6   A0A0R3P3R7   A0A151JC06   A0A0Q9XC48   A0A0Q5T632   Q0IF48   W8ALP7   N6TRH2   A0A0Q9X3W0   A0A1I8Q5K4   A0A1I8Q5J4   Q7PN19   D2A265   B7Z140   A0A0C9RA13   A0A2H8TCQ9   A0A2S2NQ73   B0W5Q0   A0A1S4J5Y6   A0A084VP33   W8AXX1   U4UUE1   A0A0Q9X367   J9JWG7   A0A0R1EIH1   A0A1B6CX62   A0A2H8TQC6   A0A0Q9WLJ0   A0A1W4VUP3   B4MDC6   A0A0R1EBY5   A0A232EVG5   A0A0Q9XD78   B4KFP7   A0A0R3P2D8   A0A0Q9X360   A0A2S2NBA8   A0A0Q5T389   A0A1B6KZZ6   A0A067RK62   A0A1J1INQ4   A0A1B6D853   A0A0Q5THD4   A0A2H8TXZ1   A0A0Q9WL62   A0A0M4DZC9   A0A0Q9WX58  

Pubmed

23622113    28756777    22118469    20798317    20920257    23761445    + More
25244985    30249741    28004739    12364791    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17994087    17550304    26483478    15632085    17510324    24495485    23537049    18362917    19820115    24438588    28648823    24845553   

EMBL

GDQN01006738    JAT84316.1    ODYU01007280    SOQ49915.1    RSAL01000244    RVE43599.1    + More
GAIX01003887    JAA88673.1    NWSH01001364    PCG71537.1    KZ149932    PZC77308.1    AGBW02011326    OWR46824.1    GL442898    EFN62767.1    AXCN02000872    APCN01002500    AXCM01007613    GGFK01004078    MBW37399.1    ADMH02001962    ETN60162.1    QOIP01000007    RLU20427.1    GGFJ01000404    MBW49545.1    GGFJ01000403    MBW49544.1    GGFJ01000405    MBW49546.1    GEZM01035531    JAV83195.1    GEZM01035526    JAV83199.1    AAAB01008964    KQ977771    KYM99990.1    GGFM01001400    MBW22151.1    AE014298    ACL82916.1    KQ434864    KZC08997.1    CM000162    KRK07011.1    JXUM01052979    KQ561757    KXJ77619.1    JXUM01016286    KQ560454    KXJ82337.1    KQ981522    KYN40569.1    KQ976504    KYM82910.1    KQ435944    KOX68194.1    KZ288292    PBC29189.1    GFDL01009465    JAV25580.1    CH676132    KRT05763.1    LJIG01022743    KRT78948.1    GFDL01009521    JAV25524.1    KRT05766.1    KQ979122    KYN22519.1    CH933807    KRG02484.1    CH954180    KQS29872.1    CH477394    EAT41891.2    GAMC01016885    JAB89670.1    APGK01022612    KB740436    ENN80658.1    KRG02485.1    EAA12904.5    KQ971338    EFA02746.2    ACL82915.1    GBYB01003656    JAG73423.1    GFXV01000089    MBW11894.1    GGMR01006711    MBY19330.1    DS231844    EDS35703.1    ATLV01014972    KE524999    KFB39727.1    GAMC01016887    JAB89668.1    KB632373    ERL93775.1    KRG02480.1    ABLF02033886    KRK07012.1    GEDC01019271    GEDC01016848    JAS18027.1    JAS20450.1    GFXV01004540    MBW16345.1    CH940661    KRF85514.1    EDW71187.1    KRK07016.1    NNAY01002015    OXU22305.1    KRG02478.1    EDW11012.1    KRT05773.1    KRG02479.1    GGMR01001885    MBY14504.1    KQS29868.1    GEBQ01023153    JAT16824.1    KK852424    KDR24182.1    CVRI01000054    CRL00726.1    GEDC01015468    GEDC01001645    JAS21830.1    JAS35653.1    KQS29867.1    GFXV01006984    MBW18789.1    KRF85513.1    CP012523    ALC37916.1    KRF85515.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000000311    UP000075886    UP000075840    + More
UP000075902    UP000075903    UP000075884    UP000076407    UP000075883    UP000075885    UP000000673    UP000076408    UP000279307    UP000075900    UP000069272    UP000078542    UP000000803    UP000076502    UP000002282    UP000069940    UP000249989    UP000192223    UP000078541    UP000192221    UP000078540    UP000053105    UP000242457    UP000001819    UP000005203    UP000078492    UP000009192    UP000008711    UP000008820    UP000019118    UP000095300    UP000007062    UP000007266    UP000002320    UP000030765    UP000030742    UP000007819    UP000008792    UP000215335    UP000027135    UP000183832    UP000092553   

PRIDE

B7Z138   

Pfam

PF00005   ABC_tran        + More
PF00664   ABC_membrane
PF02145   Rap_GAP

Interpro

IPR039930   RALGAPB        + More
IPR035974   Rap/Ran-GAP_sf       
IPR000331   Rap_GAP_dom       
IPR016024   ARM-type_fold       
IPR003593   AAA+_ATPase       
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR011527   ABC1_TM_dom       
IPR036640   ABC1_TM_sf       

SUPFAM

SSF111347   SSF111347        + More
SSF48371   SSF48371       
SSF52540   SSF52540       
SSF90123   SSF90123       

Gene 3D

3.40.50.11210     1.20.1560.10    

ProteinModelPortal

A0A1E1WBH6   A0A2H1WA00   A0A3S2L1M2   S4PFT6   A0A2A4JHL1   A0A2W1BQM4   + More
A0A212EZF5   E2AUV9   A0A182Q2H7   A0A182HV79   A0A182TDZ2   A0A182UUU6   A0A182NE38   A0A182WT86   A0A182LVU3   A0A2M4A9E8   A0A182PJ71   W5J6S7   A0A182YGU5   A0A3L8DJ41   A0A182RBM0   A0A1Y9G8G0   A0A2M4B8Z6   A0A2M4B917   A0A2M4B944   A0A1Y1MFT6   A0A1Y1MBJ0   A0A453YTJ1   A0A151IFS4   A0A1S4GXG4   A0A2M3Z0Z3   B7Z138   A0A154PB09   A0A0R1EG05   A0A182GBS6   A0A182GR84   A0A1W4X266   A0A1W4XCZ0   A0A1W4XBM7   A0A195FKP4   A0A1W4VVG0   A0A195BFG5   A0A1W4VHC1   A0A1W4X2A4   A0A0N1IT18   A0A2A3ED95   A0A1Q3FDF3   A0A0R3P398   A0A0T6AVE8   A0A1Q3FD58   A0A088ANE6   A0A0R3P3R7   A0A151JC06   A0A0Q9XC48   A0A0Q5T632   Q0IF48   W8ALP7   N6TRH2   A0A0Q9X3W0   A0A1I8Q5K4   A0A1I8Q5J4   Q7PN19   D2A265   B7Z140   A0A0C9RA13   A0A2H8TCQ9   A0A2S2NQ73   B0W5Q0   A0A1S4J5Y6   A0A084VP33   W8AXX1   U4UUE1   A0A0Q9X367   J9JWG7   A0A0R1EIH1   A0A1B6CX62   A0A2H8TQC6   A0A0Q9WLJ0   A0A1W4VUP3   B4MDC6   A0A0R1EBY5   A0A232EVG5   A0A0Q9XD78   B4KFP7   A0A0R3P2D8   A0A0Q9X360   A0A2S2NBA8   A0A0Q5T389   A0A1B6KZZ6   A0A067RK62   A0A1J1INQ4   A0A1B6D853   A0A0Q5THD4   A0A2H8TXZ1   A0A0Q9WL62   A0A0M4DZC9   A0A0Q9WX58  

KEGG

101739830    no KO assigned | (RefSeq) ral GTPase-activating protein subunit beta-like

GO

GO:0005096   GO:0051056   GO:0016021   GO:0005524   GO:0090630  

PANTHER

PTHR21344  

Length:

489

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.30735

Exp number, first 60 AAs:

0.01047

Total prob of N-in:

0.01950

outside

1  -  489

 

 

Pi

192.1426

Theta

162.399005

Tajima's D

0.004607

CLR

193.626796

CSRT

0.368581570921454

Interpretation

Uncertain