Gene

KWMTBOMO12381

Pre Gene Modal

BGIBMGA012402

Annotation

PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]

Location

Bomo_Chr21(-):1757738-1765796      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.65

CDS

ATGAGTGACGCAGCGTTCCCCACGCTGGACGCCGTGCTGCGCCAGCTCGGGGACCCGGAGGCGCCGACCCTGTTCAAGCTGTTAGAGCAGCAGGCCGCCATCGAGAAACGCGTTAAAGAGAGCGAAGATAACGTGGTACCGGAAGAATATGTTCCTCCGGAGCCGGTCACAGAGTTCCAGACGGCGAGACTGTTCCTCTCGCATTTCGGCTACCTCAACATCGGAGGTGATAAAAAGGGCGGGGCGGCGCGGCTGTGGGCGCTGCGCGCGGGCGGCGCGGGCTGGGCGGCGGCGGTGCGGCGCGTGGACGCGTGCGGCGCGCGGGCGGCGCTCACCGTGCACGTGTTCTGTGCGCGCGCCGGACACACGCGCGCCGCCGACATCCTGCGCAACGCCTCCTGCACCTCCGGCCTGCCCGCCGGCTTCCTCGCCATGCTCAGAGGCCTGGGCAAACCAGTAAGGGTCCGCGGCCACGGCGGCTGGACTGGCCACGTGGACACCAGCTACGACACTCCGCATCTGCAGGATCTGCCGCCAGCCAACAACGTCGGGGAGAAAGCGCCCGCTATATACGACGGGAGGGAGCAGGTGCTGTACTGGTCGGACTCCACGAGCGAGATAGCGTTCGTGGTCCCGTCGGGGCTCGGGCCGAGCGACGCGCCGCCCGACCGCCGCAGCGACAGCATCAAGTCCGACACCGACGGGTCCTGTACATCCTCGAGGAGCTCAGAGAAGGGAGCGGGCTCGTGCTGGGACGTGTCGAGCGAGACGCACGACAAGCTGCGCGCTCTCTCGCTCGACCTGGACAGGCAGCCCGCCGCCGCGCCCGGTAGTGGACGACGTAACAGAGATTTTACTACCAAAATACTGATTATATGGCTTGAAGACTTCGAGGATCAATTGAATTTACCGATCGAGGAGCTGCTGGGCTACTGCGAGACGGGCGTGTGGTGGCGGCGCGAGGAGGTGTGCGTGGTGTGCGCGTGCGAGGCGCGCAGCGGGCTGGTGCGCGTGTCCGCCGCCGCCGCGCTGCTGGCGCCGCGCCTGCTGCCCCACGTGCTGCGCCAGCAGGCCCTCGCGCACGCGCGTCTGCACACCGACCTGTACCAGCCGCCTCACGTGAGACGGCGCCACCTCATACAGGAGCTGGCGCAGCAGTTCCGCCAGGACCTCACCGAGCCCGAGCTGCTGGAGTCGCTGTTCAAGAGTCCGTAG

Protein

MSDAAFPTLDAVLRQLGDPEAPTLFKLLEQQAAIEKRVKESEDNVVPEEYVPPEPVTEFQTARLFLSHFGYLNIGGDKKGGAARLWALRAGGAGWAAAVRRVDACGARAALTVHVFCARAGHTRAADILRNASCTSGLPAGFLAMLRGLGKPVRVRGHGGWTGHVDTSYDTPHLQDLPPANNVGEKAPAIYDGREQVLYWSDSTSEIAFVVPSGLGPSDAPPDRRSDSIKSDTDGSCTSSRSSEKGAGSCWDVSSETHDKLRALSLDLDRQPAAAPGSGRRNRDFTTKILIIWLEDFEDQLNLPIEELLGYCETGVWWRREEVCVVCACEARSGLVRVSAAAALLAPRLLPHVLRQQALAHARLHTDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFKSP

Uniprot

H9JS92   A0A3S2L1M2   A0A2A4JHL1   A0A194PUT5   A0A212EZF5   A0A1E1WD73   + More
A0A2W1BQM4   D2A265   A0A1W4XBM7   A0A1W4X2A4   A0A1W4XCZ0   A0A1W4X266   F4WB01   A0A0C9RA13   A0A195BFG5   A0A158NRE5   A0A1B0CD12   A0A195FKP4   A0A067RK62   A0A151IFS4   A0A026W5S6   A0A154PB09   E9IS00   A0A151JC06   E2B8D2   U4UUE1   A0A2A3ED95   A0A1B6GN48   A0A1B6M9B6   A0A0M4EDQ9   A0A0M4DZC9   A0A182JDQ4   A0A182L237   A0A182NE38   A0A182HV79   A0A182W7V6   A0A088ANE6   A0A182Q2H7   A0A0K8VSU6   A0A0K8U258   A0A0K8W8N9   A0A182PJ71   A0A182WT86   A0A1S4GXG4   A0A453YTJ1   B4JD40   A0A182RBM0   Q7PN19   A0A0L7RGR3   V5I2Y1   A0A182UUU6   A0A1B0D4J4   E2AUV9   A0A232EVG5   A0A084VP33   A0A0J7KAL8   A0A151XI57   A0A182LVU3   A0A1B6D853   A0A1B6CX62   A0A0C9R6R3   A0A0L0C2G0   W8ATY3   A0A0N1IT18   A0A3Q0S5S7   T1PDB7   W8BJ97   A0A2C9KLT9   W8ALP7   W8AXX1   A0A2C9KLT1   A0A2C9KLZ0   A0A2C9KLT3   K1QFQ5   A0A1E1XM82   V5GIH4   A0A0B7AW38   A0A0B7AVF7   A0A0B7AUY0   A0A0B7AY70   A0A210QXC5   A0A3B3Z8C3   A0A2H8TCQ9   A0A2S2NQ73   A0A2H8TXZ1   A0A2H8TQC6   A0A0A1X7V4   A0A1I8M712   A0A2S2QBN4   A0A0A1XG88   A0A2S2QLZ1   V4BMK8   A0A336MB89   A0A336MJE4   A0A336MCQ7   R7TM01   A0A293M445  

Pubmed

19121390    26354079    22118469    28756777    18362917    19820115    + More
21719571    21347285    24845553    24508170    21282665    20798317    23537049    20966253    12364791    17994087    25765539    28648823    24438588    26108605    24495485    15562597    22992520    29209593    28812685    25463417    25830018    25315136    23254933   

EMBL

BABH01041314    BABH01041315    BABH01041316    BABH01041317    RSAL01000244    RVE43599.1    + More
NWSH01001364    PCG71537.1    KQ459591    KPI97082.1    AGBW02011326    OWR46824.1    GDQN01006124    JAT84930.1    KZ149932    PZC77308.1    KQ971338    EFA02746.2    GL888056    EGI68621.1    GBYB01003656    JAG73423.1    KQ976504    KYM82910.1    ADTU01023841    ADTU01023842    AJWK01007295    KQ981522    KYN40569.1    KK852424    KDR24182.1    KQ977771    KYM99990.1    KK107390    EZA51427.1    KQ434864    KZC08997.1    GL765283    EFZ16701.1    KQ979122    KYN22519.1    GL446310    EFN88052.1    KB632373    ERL93775.1    KZ288292    PBC29189.1    GECZ01005910    JAS63859.1    GEBQ01007460    JAT32517.1    CP012523    ALC38080.1    ALC37916.1    APCN01002500    AXCN02000872    GDHF01010370    JAI41944.1    GDHF01033271    GDHF01031713    JAI19043.1    JAI20601.1    GDHF01018599    GDHF01004803    JAI33715.1    JAI47511.1    AAAB01008964    CH916368    EDW04284.1    EAA12904.5    KQ414596    KOC70045.1    GANP01002365    JAB82103.1    AJVK01003262    AJVK01003263    AJVK01003264    AJVK01003265    AJVK01003266    GL442898    EFN62767.1    NNAY01002015    OXU22305.1    ATLV01014972    KE524999    KFB39727.1    LBMM01010650    KMQ87337.1    KQ982117    KYQ59900.1    AXCM01007613    GEDC01015468    GEDC01001645    JAS21830.1    JAS35653.1    GEDC01019271    GEDC01016848    JAS18027.1    JAS20450.1    GBYB01003655    JAG73422.1    JRES01000986    KNC26436.1    GAMC01016888    JAB89667.1    KQ435944    KOX68194.1    KA646782    AFP61411.1    GAMC01016886    JAB89669.1    GAMC01016885    JAB89670.1    GAMC01016887    JAB89668.1    JH816923    EKC29924.1    GFAA01003079    JAU00356.1    GANP01014443    JAB70025.1    HACG01037982    CEK84847.1    HACG01037983    CEK84848.1    HACG01037984    CEK84849.1    HACG01037980    CEK84845.1    NEDP02001369    OWF53364.1    GFXV01000089    MBW11894.1    GGMR01006711    MBY19330.1    GFXV01006984    MBW18789.1    GFXV01004540    MBW16345.1    GBXI01006923    JAD07369.1    GGMS01005951    MBY75154.1    GBXI01004331    JAD09961.1    GGMS01009490    MBY78693.1    KB202481    ESO90184.1    UFQT01000655    SSX26189.1    SSX26188.1    SSX26187.1    AMQN01012096    KB309293    ELT94828.1    GFWV01010142    MAA34871.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000007266    + More
UP000192223    UP000007755    UP000078540    UP000005205    UP000092461    UP000078541    UP000027135    UP000078542    UP000053097    UP000076502    UP000078492    UP000008237    UP000030742    UP000242457    UP000092553    UP000075880    UP000075882    UP000075884    UP000075840    UP000075920    UP000005203    UP000075886    UP000075885    UP000076407    UP000001070    UP000075900    UP000007062    UP000053825    UP000075903    UP000092462    UP000000311    UP000215335    UP000030765    UP000036403    UP000075809    UP000075883    UP000037069    UP000053105    UP000261340    UP000076420    UP000005408    UP000242188    UP000261520    UP000095301    UP000030746    UP000014760   

PRIDE

H9JS92   

Pfam

PF02145   Rap_GAP        + More
PF05602   CLPTM1

Interpro

IPR039930   RALGAPB        + More
IPR035974   Rap/Ran-GAP_sf       
IPR000331   Rap_GAP_dom       
IPR016024   ARM-type_fold       
IPR008429   CLPTM1       

SUPFAM

SSF111347   SSF111347        + More
SSF48371   SSF48371       

Gene 3D

3.40.50.11210    

ProteinModelPortal

H9JS92   A0A3S2L1M2   A0A2A4JHL1   A0A194PUT5   A0A212EZF5   A0A1E1WD73   + More
A0A2W1BQM4   D2A265   A0A1W4XBM7   A0A1W4X2A4   A0A1W4XCZ0   A0A1W4X266   F4WB01   A0A0C9RA13   A0A195BFG5   A0A158NRE5   A0A1B0CD12   A0A195FKP4   A0A067RK62   A0A151IFS4   A0A026W5S6   A0A154PB09   E9IS00   A0A151JC06   E2B8D2   U4UUE1   A0A2A3ED95   A0A1B6GN48   A0A1B6M9B6   A0A0M4EDQ9   A0A0M4DZC9   A0A182JDQ4   A0A182L237   A0A182NE38   A0A182HV79   A0A182W7V6   A0A088ANE6   A0A182Q2H7   A0A0K8VSU6   A0A0K8U258   A0A0K8W8N9   A0A182PJ71   A0A182WT86   A0A1S4GXG4   A0A453YTJ1   B4JD40   A0A182RBM0   Q7PN19   A0A0L7RGR3   V5I2Y1   A0A182UUU6   A0A1B0D4J4   E2AUV9   A0A232EVG5   A0A084VP33   A0A0J7KAL8   A0A151XI57   A0A182LVU3   A0A1B6D853   A0A1B6CX62   A0A0C9R6R3   A0A0L0C2G0   W8ATY3   A0A0N1IT18   A0A3Q0S5S7   T1PDB7   W8BJ97   A0A2C9KLT9   W8ALP7   W8AXX1   A0A2C9KLT1   A0A2C9KLZ0   A0A2C9KLT3   K1QFQ5   A0A1E1XM82   V5GIH4   A0A0B7AW38   A0A0B7AVF7   A0A0B7AUY0   A0A0B7AY70   A0A210QXC5   A0A3B3Z8C3   A0A2H8TCQ9   A0A2S2NQ73   A0A2H8TXZ1   A0A2H8TQC6   A0A0A1X7V4   A0A1I8M712   A0A2S2QBN4   A0A0A1XG88   A0A2S2QLZ1   V4BMK8   A0A336MB89   A0A336MJE4   A0A336MCQ7   R7TM01   A0A293M445  

KEGG

101739688    no KO assigned | (RefSeq) ral GTPase-activating protein subunit beta-like

GO

GO:0051056   GO:0005096   GO:0090630   GO:0016021   GO:0008026   GO:0006260   GO:0006281   GO:0043140   GO:0006310   GO:0000049   GO:0005975   GO:0004553  

PANTHER

PTHR21344  

Length:

404

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0511

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.00434

outside

1  -  404

 

 

Pi

161.374544

Theta

135.291612

Tajima's D

-1.808136

CLR

0.356483

CSRT

0.0271986400679966

Interpretation

Uncertain