Gene

KWMTBOMO12369

Pre Gene Modal

BGIBMGA012368

Annotation

PREDICTED:_bumetanide-sensitive_sodium-(potassium)-chloride_cotransporter_[Bombyx_mori]

Location

Bomo_Chr21(-):1576628-1602886      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.439

CDS

ATGGGTTCCTCGCAGAAAGATATTGAATTGAGTCCGGTTCGAGGTGAAGCAAAGTCCCTGCCCGCAGATAAGCTGAACACCCAGGTACACGATGAAGAAGATGTGATAATTGGTAGATTTCGAAAGATAAGCTCAGCCAAGTCTATGGCAGCAACAAACGGGAATATTCAGTATCCCTCAGAGAGTCCTTTGCGATCTGATGATGTTGAGGCAGGACTACATTTTAATACTAAAGAGCCGTGTGAGAAGAACAAATTGCTTGATTCTGCGAACCTAGAGTTGGTGTCTCCTAAATGTTCATTAACGAAAAGTAGTTTTAGAGATGTGGAGAAACCTTCGCGGTTTAAAGATCAGCCGTCGGCTACTCGATTTCAGATGGGATACAATAAAGAAGAGGACGAGGGCACGGATGACTCCGATCCGTCGGCTATGGACAGCGACGATCCACTTACCGTATCCGATACGAAGTACGGGAAAAGTTTTAGACATTTTACACGTGAAGCTCTACCTAGATTGGACAATTACAGAAATGTTTTGTCTATACATGCCGCCCATCGACCAACTTTAGATGAGCTTCACAACGCTTCATTGTCTAGGAAGTCCGGACATACTTTAGAGAAAGACGTGGAGTCTCCGACTGTGACGTCATCGAATTTAAAGTTCGGATGGATCAAGGGCGTGCTAATGCGGTGCCTCCTGAACATATGGGGCGTGATGCTGTTCTTGAGGCTATCTTGGGTCGTGGGACAAGCTGGAGTCGCGCAGTCTGTTCTCTTGATCCTCACGACATCAGTGGTGACCACTATAACGGCCCTGTCAATGTCAGCGATCTGTACCAATGGTGTTATTAAAGGGGGTGGCACATATTACATGATATCTCGCTCATTGGGCCCAGAGTTCGGTGGTTCTATAGGTCTCATATTCTCCGTGGCTAATGCGGTGGCGTGCGCCATGTACATTGTCGGCTTCGGGGAAGCTCTGATGTCTCTCATACCAGAATCTGCTTATATGGTCAGCAAAAGTTGGGATCAAGCAATATACGGGTGCATAACGGTGGTAGTGTTGACCGGTATCGTGATAGTCGGGATGGAGTGGGAGGCCAAAGCACAGATAGTGCTGCTCATCATTCTGCTGGTGGCCATCGCGGACTTCTGCGTCGGCTCTATCATTGGCCCAAAGAGCGACGAGGAGGCCGCCCGTGGCTTCGTCGGATATAGCAGTGAGTAA

Protein

MGSSQKDIELSPVRGEAKSLPADKLNTQVHDEEDVIIGRFRKISSAKSMAATNGNIQYPSESPLRSDDVEAGLHFNTKEPCEKNKLLDSANLELVSPKCSLTKSSFRDVEKPSRFKDQPSATRFQMGYNKEEDEGTDDSDPSAMDSDDPLTVSDTKYGKSFRHFTREALPRLDNYRNVLSIHAAHRPTLDELHNASLSRKSGHTLEKDVESPTVTSSNLKFGWIKGVLMRCLLNIWGVMLFLRLSWVVGQAGVAQSVLLILTTSVVTTITALSMSAICTNGVIKGGGTYYMISRSLGPEFGGSIGLIFSVANAVACAMYIVGFGEALMSLIPESAYMVSKSWDQAIYGCITVVVLTGIVIVGMEWEAKAQIVLLIILLVAIADFCVGSIIGPKSDEEAARGFVGYSSE

Uniprot

A0A2W1BUF7   A0A3S2P0N6   A0A212F8J7   A0A194PUS3   A0A0A1WLV5   A0A0A1WPB0   + More
A0A0P8YFC8   A0A0P8XSH9   B3M7T3   A0A0L0BWL3   A0A1I8MNN3   T1PCU7   T1PLE3   B4GRD7   A0A1I8NN16   A0A1I8NN17   A0A3B0JZA7   A0A3B0JZD4   A0A3B0K266   A0A0K8UIZ3   W8B4Z9   B4J334   W8AQQ8   A0A0R1DXB8   B4LFG0   A0A0Q9WVL2   A0A0Q9WQ97   A0A0K8WGP6   A0A034V8A2   A0A034V5K0   Q2M0N5   A0A0R3P7S7   A0A1W4UU50   A0A0R3P3H9   A0A1W4UGX5   A0A1W4UTV2   A0A0M4ELI8   A0A0R1DXN2   Q9VTW8   M9PCA7   B4PGC5   A0A0J9RUA0   B4N3I8   M9PI37   A0A0R1DXU5   A0A0J9RVB7   A0A0J9UJU1   B4HFL9   B4L068   B3NH95   A0A0Q5U446   A0A0Q5UIZ1   A0A1L8DEN0   B4QR94   A0A336LLE1   A0A182L9J3   Q8T5I9   A0A1S4GCA3   A0A182V675   A0A182WSC5   A0A182HL76   A0A182QW38   A0A1J1I274   A0A1J1HY40   A0A182N5V8   A0A182MPU2   A0A182VWK0   A0A182YAE0   A0A1Q3FV52   A0A1L8DE60   A0A182PGT7   A0A2M3YYV0   Q177B7   A0A2M3ZYG8   A0A2M4BB00   A0A182FBN2   A0A182R4U3   A0A2M4CSF9   A0A2M4CSL5   A0A2M4CSC4  

Pubmed

28756777    22118469    26354079    25830018    17994087    18057021    + More
26108605    25315136    24495485    17550304    25348373    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    20966253    12060762    12364791    14747013    17210077    25244985    17510324   

EMBL

KZ149932    PZC77295.1    RSAL01000066    RVE49379.1    AGBW02009708    OWR50064.1    + More
KQ459591    KPI97072.1    GBXI01014253    JAD00039.1    GBXI01013771    JAD00521.1    CH902618    KPU77647.1    KPU77645.1    EDV38806.1    KPU77646.1    JRES01001238    KNC24410.1    KA646607    AFP61236.1    KA649571    AFP64200.1    CH479188    EDW40322.1    OUUW01000012    SPP87415.1    SPP87414.1    SPP87413.1    GDHF01025642    GDHF01000020    JAI26672.1    JAI52294.1    GAMC01018179    JAB88376.1    CH916366    EDV96105.1    GAMC01018178    JAB88377.1    CM000159    KRK01744.1    CH940647    EDW69258.1    KRF84277.1    KRF84278.1    KRF84280.1    KRF84279.1    GDHF01023471    GDHF01018967    GDHF01010956    GDHF01001988    JAI28843.1    JAI33347.1    JAI41358.1    JAI50326.1    GAKP01021184    JAC37768.1    GAKP01021183    JAC37769.1    CH379069    EAL30895.2    KRT07741.1    KRT07742.1    CP012525    ALC44322.1    KRK01749.1    AE014296    AY094735    AAF49927.1    AAM11088.1    AAS65014.1    AGB94449.1    AGB94450.1    AGB94452.1    EDW94289.1    CM002912    KMY99217.1    CH964095    EDW79193.1    AGB94451.1    KRK01743.1    KRK01745.1    KRK01747.1    KRK01748.1    KMY99219.1    KMY99220.1    CH480815    EDW41250.1    CH933809    EDW18014.2    CH954178    EDV51552.1    KQS43848.1    KQS43847.1    GFDF01009165    JAV04919.1    CM000363    EDX10224.1    UFQT01000043    SSX18790.1    AJ439353    AAAB01008987    CAD27923.1    EAA00828.4    APCN01000883    AXCN02001150    CVRI01000029    CRK92473.1    CRK92474.1    AXCM01001708    GFDL01003571    JAV31474.1    GFDF01009356    JAV04728.1    GGFM01000684    MBW21435.1    CH477378    EAT42275.1    GGFK01000189    MBW33510.1    GGFJ01001059    MBW50200.1    GGFL01004079    MBW68257.1    GGFL01004077    MBW68255.1    GGFL01004078    MBW68256.1   

Proteomes

UP000283053    UP000007151    UP000053268    UP000007801    UP000037069    UP000095301    + More
UP000008744    UP000095300    UP000268350    UP000001070    UP000002282    UP000008792    UP000001819    UP000192221    UP000092553    UP000000803    UP000007798    UP000001292    UP000009192    UP000008711    UP000000304    UP000075882    UP000007062    UP000075903    UP000076407    UP000075840    UP000075886    UP000183832    UP000075884    UP000075883    UP000075920    UP000076408    UP000075885    UP000008820    UP000069272    UP000075900   

PRIDE

Q9VTW8    M9PCA7    M9PI37   

Pfam

PF03522   SLC12        + More
PF00324   AA_permease
PF08403   AA_permease_N

Interpro

IPR004842   SLC12A_fam        + More
IPR004841   AA-permease/SLC12A_dom       
IPR018491   SLC12_C       
IPR002443   SLC12A1/SLC12A2       
IPR013612   AA_permease_N       

ProteinModelPortal

A0A2W1BUF7   A0A3S2P0N6   A0A212F8J7   A0A194PUS3   A0A0A1WLV5   A0A0A1WPB0   + More
A0A0P8YFC8   A0A0P8XSH9   B3M7T3   A0A0L0BWL3   A0A1I8MNN3   T1PCU7   T1PLE3   B4GRD7   A0A1I8NN16   A0A1I8NN17   A0A3B0JZA7   A0A3B0JZD4   A0A3B0K266   A0A0K8UIZ3   W8B4Z9   B4J334   W8AQQ8   A0A0R1DXB8   B4LFG0   A0A0Q9WVL2   A0A0Q9WQ97   A0A0K8WGP6   A0A034V8A2   A0A034V5K0   Q2M0N5   A0A0R3P7S7   A0A1W4UU50   A0A0R3P3H9   A0A1W4UGX5   A0A1W4UTV2   A0A0M4ELI8   A0A0R1DXN2   Q9VTW8   M9PCA7   B4PGC5   A0A0J9RUA0   B4N3I8   M9PI37   A0A0R1DXU5   A0A0J9RVB7   A0A0J9UJU1   B4HFL9   B4L068   B3NH95   A0A0Q5U446   A0A0Q5UIZ1   A0A1L8DEN0   B4QR94   A0A336LLE1   A0A182L9J3   Q8T5I9   A0A1S4GCA3   A0A182V675   A0A182WSC5   A0A182HL76   A0A182QW38   A0A1J1I274   A0A1J1HY40   A0A182N5V8   A0A182MPU2   A0A182VWK0   A0A182YAE0   A0A1Q3FV52   A0A1L8DE60   A0A182PGT7   A0A2M3YYV0   Q177B7   A0A2M3ZYG8   A0A2M4BB00   A0A182FBN2   A0A182R4U3   A0A2M4CSF9   A0A2M4CSL5   A0A2M4CSC4  

KEGG

101737814    K10951 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 | (RefSeq) bumetan

GO

GO:0016021   GO:0015377   GO:0005215   GO:0006811   GO:0055085   GO:0008511   GO:0005886   GO:0015171   GO:0006813   GO:0003333   GO:0006821   GO:0005623   GO:0015379   GO:0055078   GO:0035725   GO:1902476   GO:0015081   GO:0015378   GO:0055064   GO:0055075   GO:0006884   GO:1990573   GO:0006810   GO:0016020   GO:0005524   GO:0003909   GO:0051103   GO:0000049   GO:0005975   GO:0004553  

Length:

408

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

109.04117

Exp number, first 60 AAs:

0

Total prob of N-in:

0.89801

inside

1  -  230

TMhelix

231  -  253

outside

254  -  256

TMhelix

257  -  279

inside

280  -  299

TMhelix

300  -  322

outside

323  -  343

TMhelix

344  -  363

inside

364  -  369

TMhelix

370  -  392

outside

393  -  408

 

 

Pi

212.091464

Theta

170.69299

Tajima's D

0.352264

CLR

0.19139

CSRT

0.470026498675066

Interpretation

Uncertain