Gene

KWMTBOMO12364  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012394

Annotation

PREDICTED:_uncharacterized_protein_LOC105841531_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr21(+):1408687-1412717      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.378

CDS

ATGTGCGTGTTCTCGATGTTCCAGGTGCTGTGTGGTGCAGTGGCGGACGCTGGCGACGAGATCGCAAACGTGAGCCGCGTGCGCCGAGCACCTCACATCTCGCACCGCATCACGATAGAAAAAGACGATATGTCGTGGAAGCGGTCCCACTGGCGGGAGATGCAGCTTATTCTCCAGCAACAGGGGACGCGGAAGGACGGTCAGTCCCCAGAGACGCAGAAAGAAGGCGTCGACTGCTGCCCCTCGGTCCTCGAAATGGTCATCAAGAAAGGAGGCCGGACGGTCAACGGACTGTATGTTGAGCTCTACGAAGACGGAGAGAACAAGCAGCGGCTGTTCGAGCTGACGTGTGCACCGGGGATCGTGGACATGCCGTGCCGGTTCATCGACGCAAGACTCTACAACGACTCGAGATGCGTCCAAAAATACTCCTACTCGTACGCGTTAGTACGGCCTCCCCCCCAGTCTTCGGCCACGGAATCTCCTCACCAGAAGTCCGAGGGACATTTCTCGGTGCCCGGCTCCGATGGCTGGTCGATGGACTACGTGAAAGTGCGTGCTGGTTGTGAGTGCCAAATTAAACCTCCAAAGAACACTCGTAAGAGACACAAGAAGAGGAAACGTAACAGAAGAATAGTTGAGAACGATGAGACCTGA

Protein

MCVFSMFQVLCGAVADAGDEIANVSRVRRAPHISHRITIEKDDMSWKRSHWREMQLILQQQGTRKDGQSPETQKEGVDCCPSVLEMVIKKGGRTVNGLYVELYEDGENKQRLFELTCAPGIVDMPCRFIDARLYNDSRCVQKYSYSYALVRPPPQSSATESPHQKSEGHFSVPGSDGWSMDYVKVRAGCECQIKPPKNTRKRHKKRKRNRRIVENDET

Uniprot

H9JS84   A0A2H1VJI2   A0A2W1BWV4   A0A2A4K7L0   A0A437BGA0   A0A212F8N4   + More
A0A194REX3   A0A194PVP9   A0A0L7LVB8   A0A154PE61   A0A088AAW2   A0A0J7L3A8   K7JD84   A0A195B0G8   A0A195EUL0   A0A151WKT4   A0A158NY49   A0A1Y1LPR1   A0A151IA92   A0A195ECL4   F4WQ92   E9J0M9   A0A2P8Z7Q9   A0A3L8E2U0   A0A1B6CAD0   A0A026WJL5   A0A1S3DMA7   A0A0K8SRX6   A0A0A9YQC1   A0A067R002   A0A0U1S873   A0A0U1SEW4   A0A2P6K474  

Pubmed

19121390    28756777    22118469    26354079    26227816    20075255    + More
21347285    28004739    21719571    21282665    29403074    30249741    24508170    25401762    26823975    24845553   

EMBL

BABH01033144    ODYU01002728    SOQ40592.1    KZ149932    PZC77290.1    NWSH01000093    + More
PCG79640.1    RSAL01000066    RVE49373.1    AGBW02009707    OWR50069.1    KQ460473    KPJ14481.1    KQ459591    KPI97068.1    JTDY01000010    KOB79463.1    KQ434886    KZC10133.1    LBMM01001106    KMQ96914.1    KQ976692    KYM77785.1    KQ981958    KYN31933.1    KQ983001    KYQ48420.1    ADTU01003169    ADTU01003170    ADTU01003171    ADTU01003172    GEZM01052705    GEZM01052704    JAV74310.1    KQ978227    KYM96232.1    KQ979074    KYN22953.1    GL888264    EGI63638.1    GL767538    EFZ13537.1    PYGN01000159    PSN52534.1    QOIP01000001    RLU26842.1    GEDC01027053    JAS10245.1    KK107168    EZA56148.1    GBRD01009723    GBRD01009722    JAG56102.1    GBHO01009773    GDHC01018561    GDHC01010162    JAG33831.1    JAQ00068.1    JAQ08467.1    KK852805    KDR16131.1    EU252235    ACD11823.1    EU252234    ACD11822.1    MWRG01030899    PRD21123.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000076502    UP000005203    UP000036403    UP000002358    UP000078540    UP000078541    UP000075809    UP000005205    UP000078542    UP000078492    UP000007755    UP000245037    UP000279307    UP000053097    UP000079169    UP000027135   

PRIDE

H9JS84   

Pfam

PF12796   Ank_2        + More
PF16077   Spaetzle
PF00243   NGF

Interpro

IPR029034   Cystine-knot_cytokine        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR032104   Spaetzle       
IPR002072   Nerve_growth_factor-rel       

SUPFAM

SSF57501   SSF57501        + More
SSF48403   SSF48403       

Gene 3D

2.10.90.10     1.25.40.20    

CDD

cd00204  ANK

ProteinModelPortal

H9JS84   A0A2H1VJI2   A0A2W1BWV4   A0A2A4K7L0   A0A437BGA0   A0A212F8N4   + More
A0A194REX3   A0A194PVP9   A0A0L7LVB8   A0A154PE61   A0A088AAW2   A0A0J7L3A8   K7JD84   A0A195B0G8   A0A195EUL0   A0A151WKT4   A0A158NY49   A0A1Y1LPR1   A0A151IA92   A0A195ECL4   F4WQ92   E9J0M9   A0A2P8Z7Q9   A0A3L8E2U0   A0A1B6CAD0   A0A026WJL5   A0A1S3DMA7   A0A0K8SRX6   A0A0A9YQC1   A0A067R002   A0A0U1S873   A0A0U1SEW4   A0A2P6K474  

KEGG

105841531    no KO assigned | (RefSeq) uncharacterized LOC105841531

GO

GO:0016021   GO:0005102  

Length:

218

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00127

Exp number, first 60 AAs:

0.00109

Total prob of N-in:

0.02058

outside

1  -  218

 

 

Pi

3.520226

Theta

3.614992

Tajima's D

-0.890195

CLR

4.561452

CSRT

0.154242287885606

Interpretation

Uncertain