Gene

KWMTBOMO12362

Pre Gene Modal

BGIBMGA006350

Annotation

PREDICTED:_uncharacterized_protein_LOC105392658_[Plutella_xylostella]

Location

Bomo_Chr21(-):1131219-1132676      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.79

CDS

ATGATAAAAGGTGTTCTGTGCAAAATGATTAATTGTAATTTGGGTGACCTCTCTTGGGAGCAATGTGTCCTGCCAGTACGTTTTGGTGGTATCGGCGTACGTAAAGCATCAGCTGTTGCGTTGCCGGCCTTTCTTGCTTCTGCACGCGCCTCCTGTCTCATAGTCGGTAATGTTCTCAACCCTTGTATGGGTTCCGTAGAGATTGTGGGTGTGTCGGAGGCTGGATCGGCCTGGCAGTCTTTTTGTCAGGCGGATTTTCCTACTTTACCGCATTTGCAGCGTCTTTGGGACACTCCGCTTTGTCAACGGATACAGCAACGGTTACTACAGTCATATGATAACAGCGTGGACATTGCTCGTTTTCGCGCCGTTACCGAAAAGGAATCAAGTTTCTGGCTTCAAGCCTATCCATCGTCCAATACAGGCACGTTGTTGGACAACAACGCTCTCTCGCTAGCTATTGGCTTACGGTTGGGGGCCCATATTAACGTACCACATTTCTGTGTCTGTGGCGAGTACGTCAATGAGCTTGGACATCACGGACTCTCGTGCCAGAAAAGCGCTGGGCGCATTCCAAGACACGCATCTTTAAATGATATGATAAGAAGGGCGCTCACTACAGTCAATGTTCCGGCTGTCTTGGAACCCATCGGCATTTTGAGGTCAGATGGGAAAAGGCCCGATGGAGTCACGCTGATTCCATGTGAAAAAGGTTTTTAG

Protein

MIKGVLCKMINCNLGDLSWEQCVLPVRFGGIGVRKASAVALPAFLASARASCLIVGNVLNPCMGSVEIVGVSEAGSAWQSFCQADFPTLPHLQRLWDTPLCQRIQQRLLQSYDNSVDIARFRAVTEKESSFWLQAYPSSNTGTLLDNNALSLAIGLRLGAHINVPHFCVCGEYVNELGHHGLSCQKSAGRIPRHASLNDMIRRALTTVNVPAVLEPIGILRSDGKRPDGVTLIPCEKGF

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

A0A194Q0M9   H9ISD2   A0A1D1V0N9   A0A1D1V1G4   A0A437B3N6   A0A1D1VI15   + More
A0A1D1V5S7   A0A1D1WA43   A0A1D1W783   A0A1Y1MW21   A0A226DSQ4   A0A1D1UPD4   A0A1W0WJQ4   A0A226EVZ6   A0A1D1VCB8   A0A2P8XZ03   A0A226ENY2   A0A226D463   A0A1D1VFL0   A0A2B7ZYB8   A0A2B7ZW65   A0A226DU26   A0A226DXH2   A0A2V3IC37   A0A2B7ZRL5   A0A1Y1MJ73   A0A1X7U8Q8   A0A1W0X5Z2   A0A1D1VIH0   A0A1D1UV52   T1F592   A0A1X7UWM7   A0A1D1VIZ6   T1FE88   T1ETD9   T1EQU9   T1FL49   A0A1X7UJV4   T1FE76   T1ER08   T1FKY4   T1ESP3   A0A2P8XV61   A0A226F2H2   T1FER8   A0A1X7TVW8   A0A2P8YGC7   A0A1D1W7W2  

Pubmed

26354079    19121390    27649274    28004739    29403074    29688518    + More
23254933   

EMBL

KQ459581    KPI99111.1    BABH01024325    BDGG01000003    GAU95301.1    BDGG01000002    + More
GAU94690.1    RSAL01000186    RVE44793.1    BDGG01000007    GAV01250.1    BDGG01000004    GAU97086.1    BDGG01000021    GAV09288.1    GAV09252.1    GEZM01019101    JAV89874.1    LNIX01000012    OXA48253.1    GAU91574.1    MTYJ01000088    OQV15451.1    LNIX01000001    OXA61805.1    BDGG01000005    GAU99276.1    PYGN01001141    PSN37238.1    LNIX01000003    OXA58286.1    LNIX01000038    OXA39608.1    BDGG01000006    GAV00437.1    PDHN01000629    PGH38391.1    PDHN01001114    PGH37252.1    LNIX01000011    OXA48508.1    LNIX01000010    OXA49381.1    NBIV01000529    PXF39672.1    PDHN01000428    PGH39064.1    GEZM01032301    JAV84680.1    MTYJ01000015    OQV22929.1    GAV01400.1    GAU91622.1    AMQM01004200    KB096457    ESO04719.1    GAV01570.1    AMQM01006745    KB097510    ESN95674.1    AMQM01001231    KB097143    ESN99390.1    AMQM01000699    KB096324    ESO06725.1    AMQM01009916    KB097151    ESN98374.1    AMQM01006742    ESN95658.1    AMQM01000737    KB096742    ESO01848.1    AMQM01009627    KB096717    ESO02733.1    AMQM01001089    ESN98981.1    PYGN01001298    PSN35898.1    OXA63637.1    AMQM01006863    KB097528    ESN95404.1    PYGN01000621    PSN43234.1    BDGG01000023    GAV09477.1   

Proteomes

UP000053268    UP000005204    UP000186922    UP000283053    UP000198287    UP000245037    + More
UP000247409    UP000007879    UP000015101   

PRIDE

H9ISD2   

Pfam

PF00078   RVT_1        + More
PF00628   PHD
PF02257   RFX_DNA_binding
PF00858   ASC
PF03184   DDE_1

Interpro

IPR000477   RT_dom        + More
IPR036388   WH-like_DNA-bd_sf       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003150   DNA-bd_RFX       
IPR036390   WH_DNA-bd_sf       
IPR008962   PapD-like_sf       
IPR013783   Ig-like_fold       
IPR001873   ENaC       
IPR004875   DDE_SF_endonuclease_dom       
IPR020903   ENaC_CS       
IPR029063   SAM-dependent_MTases       

SUPFAM

SSF57903   SSF57903        + More
SSF46785   SSF46785       
SSF49354   SSF49354       
SSF53335   SSF53335       

Gene 3D

1.10.10.10     3.30.40.10     2.60.40.10    

ProteinModelPortal

A0A194Q0M9   H9ISD2   A0A1D1V0N9   A0A1D1V1G4   A0A437B3N6   A0A1D1VI15   + More
A0A1D1V5S7   A0A1D1WA43   A0A1D1W783   A0A1Y1MW21   A0A226DSQ4   A0A1D1UPD4   A0A1W0WJQ4   A0A226EVZ6   A0A1D1VCB8   A0A2P8XZ03   A0A226ENY2   A0A226D463   A0A1D1VFL0   A0A2B7ZYB8   A0A2B7ZW65   A0A226DU26   A0A226DXH2   A0A2V3IC37   A0A2B7ZRL5   A0A1Y1MJ73   A0A1X7U8Q8   A0A1W0X5Z2   A0A1D1VIH0   A0A1D1UV52   T1F592   A0A1X7UWM7   A0A1D1VIZ6   T1FE88   T1ETD9   T1EQU9   T1FL49   A0A1X7UJV4   T1FE76   T1ER08   T1FKY4   T1ESP3   A0A2P8XV61   A0A226F2H2   T1FER8   A0A1X7TVW8   A0A2P8YGC7   A0A1D1W7W2  

KEGG

NA   

GO

GO:0046872   GO:0016301   GO:0006355   GO:0003677   GO:0016021   GO:0003676   GO:0005272  

PANTHER

PTHR11690  

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.306430000000001

Exp number, first 60 AAs:

0.28813

Total prob of N-in:

0.07087

outside

1  -  239

 

 

Pi

59.113264

Theta

56.595019

Tajima's D

0.376246

CLR

0

CSRT

0.48077596120194

Interpretation

Uncertain