Gene

KWMTBOMO12354

Pre Gene Modal

BGIBMGA012391

Annotation

PREDICTED:_chondroitin_sulfate_synthase_1_[Bombyx_mori]

Location

Bomo_Chr21(+):989577-1000092      View in EpiBrowser

Full name

Hexosyltransferase      

Location in the cell

Cytoplasmic   Reliability : 1.405 Mitochondrial   Reliability : 1.99

CDS

ATGCAAACGATTCTCCATCACAATGGCAGCGGCGAGGCTGCCTACACCGGTCGGTTGAAAGCCAGAGAGGTGCACCGAGCCATCACCTTGCATCCGGTGAAAGACCATCGCCAGATGTACAGAATACATTCATATTTCAAGAACTTTCGTATCCAAGAACTTCGCGAACGTTCCCTGGATCTCCACCGGGACATCTCCTCGGCGCTTCGGGAGCTCTCTATTCCCCGGGACGAGGTCGATGACTTTGTCTTACCCGGAGACGTCCCGCTGTTCCCGGCCAAGATTGGGGAGCCAGGATACTTGGGGGATAATAAAATATTAGGTGCCCCGATAGACATGAATCGGTACAAGCCCTCCAATCTAGACGATATCGTCATATTCGACTTCATCAGCAAGAGCCTGTACTCCGCCTACCACTCAAACCCGAAAAGACGAGTGGAGCTACCCCTGAAAGAAGCTATGGATGATGTTATCAGAGAAAAGTATAATAGTCCTTGA

Protein

MQTILHHNGSGEAAYTGRLKAREVHRAITLHPVKDHRQMYRIHSYFKNFRIQELRERSLDLHRDISSALRELSIPRDEVDDFVLPGDVPLFPAKIGEPGYLGDNKILGAPIDMNRYKPSNLDDIVIFDFISKSLYSAYHSNPKRRVELPLKEAMDDVIREKYNSP

Similarity

Belongs to the chondroitin N-acetylgalactosaminyltransferase family.

Uniprot

H9JS81   A0A2H1X317   A0A3S2NLT0   A0A1E1W9F5   A0A0L7LT67   A0A2W1BGU7   + More
A0A194PUH9   A0A2A4JUH5   A0A194RA34   A0A212F2Z6   A0A2P8Y5F4   A0A2J7Q327   A0A182SU58   A0A067QLV6   A0A182KC49   A0A182MZU9   A0A182Q9N3   A0A182MEV0   A0A182W4Y1   A0A182XNE3   A0A182UBA5   A0A453YJK4   A0A182V1C0   A0A182Y4Y9   Q7QHY5   Q175Z7   A0A1S4FDT8   A0A182RPA9   A0A084VUT5   A0A182H1K5   A0A182J0V2   A0A182PDM9   B0X8P8   A0A2M4CNB6   A0A182FK38   A0A2M4BCY4   A0A2M4BCY8   A0A2M4BCY7   A0A2S2NW78   W5JWW3   U4UJU7   N6U1C6   J9JJR6   A0A1W4WDF8   A0A2H8TSQ0   A0A0L7R6R2   A0A2S2Q739   A0A087ZN64   A0A336LQ72   A0A151J1R6   E1ZW55   E2C9U3   A0A139WAC1   A0A224XFS5   A0A1J1HT45   A0A1J1HRF4   A0A3L8E3L7   A0A026VXM4   A0A0L0C948   A0A158P0Y9   A0A195AUR8   A0A151WW89   A0A154PEY4   A0A1B0CRF3   F4WTX6   A0A2R7VP29   A0A1S3DGU7   A0A1A9ZID4   A0A1Y1K5E5   W8CCX4   T1HKH9   A0A0C9RDW1   A0A1A9VRT9   A0A1I8PYK0   A0A1A9W8P6   A0A151JUT0   A0A1Y1K292   B4JLJ5   B4L3W6   A0A1B0D0U2   A0A0A1X398   A0A0K8UAW0   A0A3B0JF75   A0A034VQ09   Q7Z1Z0   A0A0Q9X210   B4NEC6   Q7KUZ9   B4PWP9   B4R588   A0A151ILV9   B4IK91   A0A1W4VG21   B3MZ25   A0A0Q9WN77   B4M3K3   B5DLQ0   A0A0R3NZ53   B4GWH1  

EC Number

2.4.1.-

Pubmed

19121390    26227816    28756777    26354079    22118469    29403074    + More
24845553    25244985    12364791    14747013    17210077    17510324    24438588    26483478    20920257    23761445    23537049    20798317    18362917    19820115    30249741    24508170    26108605    21347285    21719571    28004739    24495485    17994087    18057021    25830018    25348373    12761549    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    23185243   

EMBL

BABH01033107    BABH01033108    BABH01033109    BABH01033110    BABH01033111    BABH01033112    + More
BABH01033113    ODYU01013060    SOQ59721.1    RSAL01000284    RVE42988.1    GDQN01007563    JAT83491.1    JTDY01000138    KOB78645.1    KZ150229    PZC72020.1    KQ459591    KPI97061.1    NWSH01000557    PCG75675.1    KQ460473    KPJ14487.1    AGBW02010645    OWR48109.1    PYGN01000906    PSN39485.1    NEVH01019070    PNF22983.1    KK853171    KDR10328.1    AXCN02002440    AXCM01001757    APCN01004786    AAAB01008811    EAA04965.5    CH477391    EAT41961.1    ATLV01017013    KE525142    KFB41729.1    JXUM01023219    KQ560655    KXJ81415.1    DS232496    EDS42640.1    GGFL01002654    MBW66832.1    GGFJ01001764    MBW50905.1    GGFJ01001765    MBW50906.1    GGFJ01001763    MBW50904.1    GGMR01008796    MBY21415.1    ADMH02000142    ETN67624.1    KB632237    ERL90461.1    APGK01043593    APGK01043594    KB741015    ENN75350.1    ABLF02027163    GFXV01005412    MBW17217.1    KQ414646    KOC66565.1    GGMS01004334    MBY73537.1    UFQT01000107    SSX20080.1    KQ980514    KYN15733.1    GL434776    EFN74564.1    GL453902    EFN75280.1    KQ971410    KYB24850.1    GFTR01005101    JAW11325.1    CVRI01000020    CRK90556.1    CRK90555.1    QOIP01000001    RLU27340.1    KK107602    EZA48558.1    JRES01000749    KNC28775.1    ADTU01005907    ADTU01005908    ADTU01005909    KQ976738    KYM75765.1    KQ982691    KYQ52153.1    KQ434890    KZC10413.1    AJWK01024711    AJWK01024712    AJWK01024713    GL888345    EGI62333.1    KK854011    PTY09284.1    GEZM01096748    JAV54586.1    GAMC01002945    GAMC01002943    GAMC01002941    JAC03615.1    ACPB03002001    ACPB03002002    GBYB01011267    JAG81034.1    KQ981732    KYN36557.1    GEZM01096747    JAV54588.1    CH916370    EDW00448.1    CH933810    EDW07244.2    AJVK01010068    AJVK01010069    AJVK01010070    AJVK01010071    AJVK01010072    GBXI01017355    GBXI01008976    GBXI01008799    JAC96936.1    JAD05316.1    JAD05493.1    GDHF01028545    GDHF01023372    JAI23769.1    JAI28942.1    OUUW01000003    SPP78862.1    GAKP01013566    JAC45386.1    AY241926    AAO85275.1    CH964239    KRF99571.1    EDW82095.2    AE014298    AAS65341.2    AHN59750.1    CM000162    EDX01795.1    CM000366    EDX17989.1    KQ977086    KYN05859.1    CH480852    EDW51483.1    CH902632    EDV32869.2    CH940651    KRF82203.1    EDW65378.1    CH379063    EDY72452.2    KRT06305.1    CH479194    EDW27055.1   

Proteomes

UP000005204    UP000283053    UP000037510    UP000053268    UP000218220    UP000053240    + More
UP000007151    UP000245037    UP000235965    UP000075901    UP000027135    UP000075881    UP000075884    UP000075886    UP000075883    UP000075920    UP000076407    UP000075902    UP000075840    UP000075903    UP000076408    UP000007062    UP000008820    UP000075900    UP000030765    UP000069940    UP000249989    UP000075880    UP000075885    UP000002320    UP000069272    UP000000673    UP000030742    UP000019118    UP000007819    UP000192223    UP000053825    UP000005203    UP000078492    UP000000311    UP000008237    UP000007266    UP000183832    UP000279307    UP000053097    UP000037069    UP000005205    UP000078540    UP000075809    UP000076502    UP000092461    UP000007755    UP000079169    UP000092445    UP000015103    UP000078200    UP000095300    UP000091820    UP000078541    UP000001070    UP000009192    UP000092462    UP000268350    UP000007798    UP000000803    UP000002282    UP000000304    UP000078542    UP000001292    UP000192221    UP000007801    UP000008792    UP000001819    UP000008744   

PRIDE

H9JS81    Q7Z1Z0    Q7KUZ9   

Pfam

PF05679   CHGN        + More
PF00059   Lectin_C
PF00790   VHS
PF02883   Alpha_adaptinC2
PF18308   GGA_N-GAT
PF03127   GAT

Interpro

IPR029044   Nucleotide-diphossugar_trans        + More
IPR008428   Chond_GalNAc       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR018378   C-type_lectin_CS       
IPR016187   CTDL_fold       
IPR002014   VHS_dom       
IPR004152   GAT_dom       
IPR008153   GAE_dom       
IPR008942   ENTH_VHS       
IPR008152   Clathrin_a/b/g-adaptin_app_Ig       
IPR038425   GAT_sf       
IPR013041   Clathrin_app_Ig-like_sf       
IPR041198   GGA_N-GAT       

SUPFAM

SSF53448   SSF53448        + More
SSF56436   SSF56436       
SSF48464   SSF48464       
SSF49348   SSF49348       

Gene 3D

3.10.100.10     3.90.550.10     1.20.58.160     1.25.40.90    

ProteinModelPortal

H9JS81   A0A2H1X317   A0A3S2NLT0   A0A1E1W9F5   A0A0L7LT67   A0A2W1BGU7   + More
A0A194PUH9   A0A2A4JUH5   A0A194RA34   A0A212F2Z6   A0A2P8Y5F4   A0A2J7Q327   A0A182SU58   A0A067QLV6   A0A182KC49   A0A182MZU9   A0A182Q9N3   A0A182MEV0   A0A182W4Y1   A0A182XNE3   A0A182UBA5   A0A453YJK4   A0A182V1C0   A0A182Y4Y9   Q7QHY5   Q175Z7   A0A1S4FDT8   A0A182RPA9   A0A084VUT5   A0A182H1K5   A0A182J0V2   A0A182PDM9   B0X8P8   A0A2M4CNB6   A0A182FK38   A0A2M4BCY4   A0A2M4BCY8   A0A2M4BCY7   A0A2S2NW78   W5JWW3   U4UJU7   N6U1C6   J9JJR6   A0A1W4WDF8   A0A2H8TSQ0   A0A0L7R6R2   A0A2S2Q739   A0A087ZN64   A0A336LQ72   A0A151J1R6   E1ZW55   E2C9U3   A0A139WAC1   A0A224XFS5   A0A1J1HT45   A0A1J1HRF4   A0A3L8E3L7   A0A026VXM4   A0A0L0C948   A0A158P0Y9   A0A195AUR8   A0A151WW89   A0A154PEY4   A0A1B0CRF3   F4WTX6   A0A2R7VP29   A0A1S3DGU7   A0A1A9ZID4   A0A1Y1K5E5   W8CCX4   T1HKH9   A0A0C9RDW1   A0A1A9VRT9   A0A1I8PYK0   A0A1A9W8P6   A0A151JUT0   A0A1Y1K292   B4JLJ5   B4L3W6   A0A1B0D0U2   A0A0A1X398   A0A0K8UAW0   A0A3B0JF75   A0A034VQ09   Q7Z1Z0   A0A0Q9X210   B4NEC6   Q7KUZ9   B4PWP9   B4R588   A0A151ILV9   B4IK91   A0A1W4VG21   B3MZ25   A0A0Q9WN77   B4M3K3   B5DLQ0   A0A0R3NZ53   B4GWH1  

KEGG

101736840    K13499 chondroitin sulfate synthase [EC:2.4.1.175 2.4.1.226] | (RefSeq) chondroitin sulfate synthase

GO

GO:0032580   GO:0008376   GO:0016740   GO:0016021   GO:0030246   GO:0006886   GO:0016192   GO:0030206   GO:0008375   GO:0015020   GO:0008270   GO:0005509   GO:0005524   GO:0003909   GO:0051103   GO:0000049   GO:0005975   GO:0004553  

Subcellular location

  

Length:

165

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00146

Exp number, first 60 AAs:

0

Total prob of N-in:

0.12900

outside

1  -  165

 

 

Pi

248.662553

Theta

19.223028

Tajima's D

0.179582

CLR

0.440776

CSRT

0.418479076046198

Interpretation

Uncertain