Silkworm Genome Informatics Database

Gene

KWMTBOMO12352 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012389

Annotation

PREDICTED:_uncharacterized_protein_LOC106136134_[Amyelois_transitella]

Location

Bomo_Chr21(+):912567-921081 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.12

CDS

ATGTCACATTTTGGCGATTTCATGGACGGAGTGCCCGTTAAAATATCGGAAAAATACAAAAAACCTCCAAGTATTGAGCTACCGTACACCTTAATAGAATGCCCAATCAGAGCTCAAAATGTTGTGGACAACGTTAAATATTGTTCTAGTTTCGAGTCGAATGTCCTTATCAAGGTTAAAGAGCTGCGAAGGATTAAGGAGACGAAGAAAAACGAAAGGAAACATCGATTACAGCTGTTGGAAGAAGCAAAACAGAAGAAGTTGGATGCCATAGCTTTGGCAGAGGAAAAAGAAAGGTTGAAACAACTGAATGTGTCTGAAGTGTCTTACCCTAGTACAGACGAGATAAATCCACTGACTTCGGATGAGAAAAATGAAATTAACTGTGATAGTAACATAGGTGATACAAAAGAAACCGCTGAAGTTAGCATAACAGATATTAATATAATACCTGCAACAACTGCAAATGAGTCGCAGAACATTCTTCAACCAACACTTGTTAAGTTTAATTATGAAGGAAGTCTATTAGATGACCCTGATCCATTAGAAACATACAAATTAAATGCTAAAGTGAGCAAAATTCAGTACAATCACAATATAGACACCTTGACGTATAGAGATTTTGAAAATGATACATCCAGCCCTTTTGATAATGTTGAGTTGAAAACTATAAATGATATGGAGTTACTAGCTCAAGTATTACAAAGTCAAAAAGAATCTGTTGTCAGCTGTTCACAACAACCCCATTTAATAGAGCAAGGTTATGGGGTACCTAACTGTGCCTCTCAAGCTCAAATAGGAATTTCTTACTTACCTAATTCATATGTGGAGCAGCCAACACAAGAGCAAGGCTTGGTGTATACACATCATTATCCAAGTAATTACTATGCTCCAGAATTGGATAATGCTAATGTTCCACAGAATTACCAGTACAATGCCTCTCCTAACCTTTACACAGTACCCAATTATTATAGTAATCAAGTGATATCAGCAGATATAAAAGTTTCTAATGATGCACAGTGTTCATCCCAGCCTTACTATTATCAGTATTCACCAGCTCAGTATCAATTAGGCTATAAACCCAATGAAATTGAGGAGCACTCACCACAAAATCCTATAAAAACGGAAACTTGTAAAGTAGAGGAACTGCCCAGTTCTCAGATAGTAAAGTCAAGGTCCCGTAGTGTACCAGATATTGTCAAGGAACTAAACGAAGAGCTTGCCAAATTAAAAATGAATGATAGATCTTACAACGTAAGCCCCGCTCCAGCAAACATTCCACAGCCATCTTCCAGCAAACAGAAGAAGAGTGAAAGAAGAAGAAAGAAGTCTGAGCATTTACCCAATCCCTATGATAAGTTGCCTCCTAAACTTCAAGGCATGTGTCAGAGAATACACGGGATGGGGTTCTCTTTGGACAGGGTTGTGAGAGTATGTACATTAGTAGGTGAAAATGATAAAAAGGTGATAGAATGCCTTCTGGTCGTGGGTGAGATGATGGATCTAGGCTTTTCGGAGGCGAGTGTGTTATCAGCACTCGCTAAGCACGACTTCAACAGGGATAAAGCGATTGATGAACTAGTAACGTAA

Protein

MSHFGDFMDGVPVKISEKYKKPPSIELPYTLIECPIRAQNVVDNVKYCSSFESNVLIKVKELRRIKETKKNERKHRLQLLEEAKQKKLDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRDFENDTSSPFDNVELKTINDMELLAQVLQSQKESVVSCSQQPHLIEQGYGVPNCASQAQIGISYLPNSYVEQPTQEQGLVYTHHYPSNYYAPELDNANVPQNYQYNASPNLYTVPNYYSNQVISADIKVSNDAQCSSQPYYYQYSPAQYQLGYKPNEIEEHSPQNPIKTETCKVEELPSSQIVKSRSRSVPDIVKELNEELAKLKMNDRSYNVSPAPANIPQPSSSKQKKSERRRKKSEHLPNPYDKLPPKLQGMCQRIHGMGFSLDRVVRVCTLVGENDKKVIECLLVVGEMMDLGFSEASVLSALAKHDFNRDKAIDELVT

Uniprot

H9JS79 A0A2W1BC72 A0A2H1X2M8 A0A2A4JV78 A0A3S2L0U8 A0A212FBD7 + More
A0A0L7LQC8 A0A194PVP1 A0A194RB43 A0A0T6ASU7 A0A1W4X106 A0A1B0BA81 A0A1A9XW51 A0A336LTX5 A0A336K358 A0A1Y1L3V1

Pubmed

19121390 28756777 22118469 26227816 26354079 28004739 + More

EMBL

BABH01033099 KZ150229 PZC72021.1 ODYU01012942 SOQ59492.1 NWSH01000557 + More
PCG75676.1 RSAL01000284 RVE42989.1 AGBW02009347 OWR51039.1 JTDY01000390 KOB77406.1 KQ459591 KPI97058.1 KQ460473 KPJ14490.1 LJIG01022888 KRT78211.1 JXJN01010869 UFQS01000097 UFQT01000097 SSW99397.1 SSX19777.1 SSW99396.1 SSX19776.1 GEZM01069125 GEZM01069124 JAV66635.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000007151 UP000037510 UP000053268 + More
UP000053240 UP000192223 UP000092460 UP000092443

PRIDE

H9JS79

Pfam

PF00627 UBA

Interpro

IPR023340   UMA        + More
IPR038870   UBAP1
IPR015940   UBA
IPR009060   UBA-like_sf

SUPFAM

SSF46934 SSF46934

ProteinModelPortal

H9JS79 A0A2W1BC72 A0A2H1X2M8 A0A2A4JV78 A0A3S2L0U8 A0A212FBD7 + More
A0A0L7LQC8 A0A194PVP1 A0A194RB43 A0A0T6ASU7 A0A1W4X106 A0A1B0BA81 A0A1A9XW51 A0A336LTX5 A0A336K358 A0A1Y1L3V1

KEGG

101746332 no KO assigned | (RefSeq) uncharacterized LOC101746332

GO

GO:0043162 GO:0000813 GO:0043130 GO:0008168

PANTHER

PTHR15960

Length:

529

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0032

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00033

outside

1 - 529

Pi

119.075381

Theta

124.828602

Tajima's D

0

CLR

0.142627

CSRT

0.367581620918954

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics