Gene

KWMTBOMO12344

Pre Gene Modal

BGIBMGA012381

Annotation

PREDICTED:_obscurin-like_[Amyelois_transitella]

Location

Bomo_Chr21(-):623824-625886      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.42 Nuclear   Reliability : 1.402

CDS

ATGCTCCCACAGACTGGTCGTGGTGGTGTTTCCTTGGACACGGAGCGGTGGACTGGCGGCGCTATCTCTCGCCTGACGTTGGGAGCGCTGCGCCGGCGGGACTCTGGCCGATATTCATGCACCGTGCTGGGACATTCCGCCACTATATCGCTCACTGTCGATGACCAGCCGAGTCCAATAGATGCGATGCAACGAGACGAGACAGCAGTAGCGCAAGTCGGGAGCGGCTTAACGATACATCAAGAATACTATACAACACTTGCGATACTGTTCACTCACATACTTATGAGATGA

Protein

MLPQTGRGGVSLDTERWTGGAISRLTLGALRRRDSGRYSCTVLGHSATISLTVDDQPSPIDAMQRDETAVAQVGSGLTIHQEYYTTLAILFTHILMR

Uniprot

H9JS71   A0A0N1PJI6   A0A212FLS1   A0A194PUP0   A0A151IDT7   A0A3L8DLH6   + More
A0A151XGG5   A0A0C9RKY6   A0A0L7R6V0   A0A158ND28   A0A3S2P7I6   A0A195F899   A0A3S2LQ63   B4NCV6   A0A087ZN57   B4L7E3   A0A0Q9XNQ8   A0A182TLS2   A0A154PG35   A0A182L8G8   A0A182XHY2   A0A182X9A8   A0A2Y9D0V5   A0A182UR64   A0A182P986   A0A182U3E4   A0A182HSW3   A0A182ILI3   A0A182VP88   A0A1S4GBV1   A0A1I8PSJ4   Q7QC80   A0A182LF00   B4MEX5   Q7PX41   A0A034VRF8   D0Z782   B4H4J2   A0A3B0K6A5   Q29I24   A0A0K2TIW3  

Pubmed

19121390    26354079    22118469    30249741    21347285    17994087    + More
20966253    12364791    25348373    15632085    23185243   

EMBL

BABH01033069    KQ459620    KPJ20543.1    AGBW02007736    OWR54640.1    KQ459591    + More
KPI97042.1    KQ977906    KYM98851.1    QOIP01000007    RLU21042.1    KQ982173    KYQ59401.1    GBYB01008855    JAG78622.1    KQ414646    KOC66573.1    ADTU01012238    ADTU01012239    ADTU01012240    ADTU01012241    ADTU01012242    ADTU01012243    ADTU01012244    ADTU01012245    ADTU01012246    ADTU01012247    RSAL01000236    RVE43720.1    KQ981744    KYN36417.1    RSAL01000032    RVE51551.1    CH964239    EDW82665.1    CH933813    EDW10937.2    KRG07306.1    KQ434890    KZC10404.1    APCN01000823    APCN01000371    AAAB01008987    AAAB01008859    EAA08211.4    CH940665    EDW71076.2    EAA01704.5    GAKP01014819    JAC44133.1    CM000831    ACY70468.1    CH479209    EDW32743.1    OUUW01000025    SPP89664.1    CH379064    EAL31582.2    KRT06371.1    HACA01008622    CDW25983.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000078542    UP000279307    + More
UP000075809    UP000053825    UP000005205    UP000283053    UP000078541    UP000007798    UP000005203    UP000009192    UP000075902    UP000076502    UP000075882    UP000076407    UP000075840    UP000075903    UP000075885    UP000075880    UP000095300    UP000007062    UP000008792    UP000008744    UP000268350    UP000001819   

PRIDE

H9JS71   

Pfam

PF07679   I-set        + More
PF07686   V-set
PF00047   ig

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold       
IPR037448   Zig-8       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

H9JS71   A0A0N1PJI6   A0A212FLS1   A0A194PUP0   A0A151IDT7   A0A3L8DLH6   + More
A0A151XGG5   A0A0C9RKY6   A0A0L7R6V0   A0A158ND28   A0A3S2P7I6   A0A195F899   A0A3S2LQ63   B4NCV6   A0A087ZN57   B4L7E3   A0A0Q9XNQ8   A0A182TLS2   A0A154PG35   A0A182L8G8   A0A182XHY2   A0A182X9A8   A0A2Y9D0V5   A0A182UR64   A0A182P986   A0A182U3E4   A0A182HSW3   A0A182ILI3   A0A182VP88   A0A1S4GBV1   A0A1I8PSJ4   Q7QC80   A0A182LF00   B4MEX5   Q7PX41   A0A034VRF8   D0Z782   B4H4J2   A0A3B0K6A5   Q29I24   A0A0K2TIW3  

KEGG

101736178    no KO assigned | (RefSeq) MAM domain-containing glycosylphosphatidylinositol anchor protein 1-like

GO

GO:0016021   GO:0050808   GO:0032589   GO:0005515   GO:0016705   GO:0020037   GO:0005509   GO:0005524   GO:0003909   GO:0051103   GO:0000049   GO:0005975   GO:0004553  

PANTHER

PTHR23279  

Length:

97

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.69849

Exp number, first 60 AAs:

0.0107

Total prob of N-in:

0.16379

outside

1  -  97

 

 

Pi

204.064796

Theta

189.671928

Tajima's D

0.208135

CLR

0.003158

CSRT

0.431128443577821

Interpretation

Uncertain