SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12343
Pre Gene Modal
BGIBMGA012386
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_cytochrome_P450_6B2-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.7 PlasmaMembrane   Reliability : 1.041
 

Sequence

CDS
ATGACACCTGCATTTACGAGCGGGAAATTGCGTGCCATGTTTCCTCTGGTCGTGGAAAGAGCTGAAAGACTTCAAGCTCGGACCCTTAAGATTGCTTCACAACCTCTAGATGCTAGAGAACTAATGGCACGTTACACGACAGATTTCATAGGCGCTTGCGGCTTTGGCCTCGATGCAGACTCACTGAACGATGAAGATTCAGCATTCAGAAAGCTTGGAGCGGCCATTTTCAACATAACTGTTCAGCGAGCAATCGTGGCTGTCCTCAAACAGATATTCCCTAGGCTATTCAAGCATTTTAAGTACTCGTCGAAGTATGAAACAGATTTTGTGAGTTTGGTCAGTTCCATATTAAAACAAAGAAATTACAAACCATCTGGTCGAAACGATTTTATTGATTTACTCTTAGAGTGTAAAATGAAAGGAGAAATCGTAGTAGAATCTATTGAGAAAATGAAACCAGATGGCACTCCTGAGATCATTAGAATGGTGTTAACAGAACAATTGCTAGCAGCTCAAGTATTCGTCTTCTTTGCAGCTGGCTTTGAAACATCGTCGTCTGCCACTAGCTTCACGCTCCATCAACTTGCGTTCCATCCTGAGATCCAAGAGAAAGTGCAAAAAGAACTAGACCAGGTTCTCGCCAAATATAACAACAAGCTGTGCTACGATGCAATTAAAGAGATGAGATACTTGGAGAGTGCGTTTAAAGAGGCCATGAGAATGTTTCCGTCGCTCGGTTTCTTGATTAGGGAGTGCGCTCGTCAATACACATTCCCGGAGTTAAACTTGACTATAGACGAAGGCGTAGGTATAATCATACCTCTCCAGGCCTTGCACAATGACCCAGAATATTTTGATAGTCCGAATGAATTCCGACCAGAAAGATTCATGCCCTCTGAATATAATCATAACAAAACGAAATTTGTCTACTTACCTTTTGGAGATGGACCTCGTCGTTGCATCGGTGCTCGCCTCGGCTTAATGCAGTCCTTGGCAGGCTTGGCAGCTGTCTTGTCCAAGTTCACGGTGAAGCCAGCTCCAAGCACCAAGCGTCATCCAGTCGTTGAACCCAAGTCCAGCGTCGTGCAGAGCATCAAAGATGGTCTGCCTCTTCTCTTCATTGAAAGGACAAAGTCCTGA
Protein
MTPAFTSGKLRAMFPLVVERAERLQARTLKIASQPLDARELMARYTTDFIGACGFGLDADSLNDEDSAFRKLGAAIFNITVQRAIVAVLKQIFPRLFKHFKYSSKYETDFVSLVSSILKQRNYKPSGRNDFIDLLLECKMKGEIVVESIEKMKPDGTPEIIRMVLTEQLLAAQVFVFFAAGFETSSSATSFTLHQLAFHPEIQEKVQKELDQVLAKYNNKLCYDAIKEMRYLESAFKEAMRMFPSLGFLIRECARQYTFPELNLTIDEGVGIIIPLQALHNDPEYFDSPNEFRPERFMPSEYNHNKTKFVYLPFGDGPRRCIGARLGLMQSLAGLAAVLSKFTVKPAPSTKRHPVVEPKSSVVQSIKDGLPLLFIERTKS

Summary

Cofactor
heme
Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01033062    AK289286    BAM73813.1    DQ993198    ABJ97708.1    AK289287    + More
BAM73814.1    AK343203    BAM73889.1    EF415299    ABN71370.1    BABH01033060    EF017798    ABK27873.1    AB498806    BAI47531.1    NWSH01000809    PCG74096.1    KX443423    ASO97998.1    KX827419    APL97605.1    JX310081    AFP20592.1    JTDY01008220    KOB64673.1    KQ460473    KPJ14499.1    GCVX01000071    JAI18159.1    GDQN01005420    JAT85634.1    GDQN01007873    GDQN01001117    JAT83181.1    JAT89937.1    JF829002    AEL87782.1    GDQN01005707    GDQN01002158    JAT85347.1    JAT88896.1    GDQN01011078    GDQN01009598    JAT79976.1    JAT81456.1    KOB64674.1    KF701131    AHW57301.1    KF701130    AHW57300.1    GCVX01000070    JAI18160.1    KF701129    AHW57299.1    KQ459591    KPI97045.1    KZ150094    PZC73629.1    KQ459606    KPI91048.1    PZC73628.1    KQ460545    KPJ14074.1    AGBW02011568    OWR46482.1    GDQN01005674    GDQN01003533    JAT85380.1    JAT87521.1    KM016734    AID54886.1    JN176570    AET11927.1    MH644187    AZP54635.1    GDQN01009559    JAT81495.1    GDQN01006843    JAT84211.1    KPJ14075.1    MG697223    AVR93642.1    KC789747    AGO62002.1    KF701132    AHW57302.1    RSAL01000123    RVE46645.1    NWSH01003644    PCG65996.1    ODYU01003027    SOQ41282.1    PCG74097.1    KOB64675.1    JTDY01009584    KOB63273.1    KF701190    AHW57360.1    JX310080    AFP20591.1    KX443422    ASO97997.1    KX443424    ASO97999.1    KPI91047.1    ODYU01011431    SOQ57167.1    KY212041    ARA91605.1    RSAL01000032    RVE51553.1    GCVX01000048    JAI18182.1    KZ149941    PZC76905.1    KQ460205    KPJ17095.1    MF684341    ASX93975.1    RSAL01000131    RVE46388.1    KPI91050.1    LADJ01036943    KPJ21304.1    KP001124    AJN91169.1    GDQN01005270    JAT85784.1    KF701135    AHW57305.1    GCVX01000066    JAI18164.1    KPI91049.1    AK401777    BAM18399.1    ODYU01004989    SOQ45412.1    GCVX01000047    JAI18183.1    KQ459620    KPJ20541.1    KOB63272.1    KJ645915    AIJ00772.1    KPJ21305.1    KJ645916    AIJ00773.1    EF111023    ABL60877.1    KF701133    AHW57303.1    EF111024    ABL60878.1    AY295773    AAP83688.1    KF701134    AHW57304.1    KJ645914    AIJ00771.1    KPI97043.1    KJ645913    AIJ00770.1    GCVX01000076    JAI18154.1    GCVX01000072    JAI18158.1    GCVX01000065    JAI18165.1    KX443425    ASO98000.1    ODYU01003028    SOQ41283.1    MG829855    AXJ21602.1    MG846941    AXY94793.1    JQ901385    AGB93713.1    RSAL01000007    RVE54122.1    KM016733    AID54885.1    NWSH01000968    PCG73362.1    JX310074    AFP20585.1    GDQN01011046    GDQN01002027    JAT80008.1    JAT89027.1    JTDY01003740    KOB69064.1    GU731534    ADE05584.1    KX443426    ASO98001.1   
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002401   Cyt_P450_E_grp-I       
IPR002402   Cyt_P450_E_grp-II       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6MJM     E-value=2.79869e-40,     Score=415

Ontologies

Topology

Length:
380
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.51876
Exp number, first 60 AAs:
0.00039
Total prob of N-in:
0.01188
outside
1  -  380
 
 

Population Genetic Test Statistics

Pi
379.559955
Theta
243.836699
Tajima's D
1.880865
CLR
0
CSRT
0.867656617169142
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号