Silkworm Genome Informatics Database

Gene

KWMTBOMO12339

Pre Gene Modal

BGIBMGA012382

Annotation

PREDICTED:_transmembrane_and_immunoglobulin_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr21(-):175817-197505 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.178

CDS

ATGATTAGGCCAGAACATCTGTATATAGTTTCAGCTGCTGTTATTCAGAAGTTATGGGTTAATGATCCCGTGGGAGATGGGTCGGTGGATCTGTCCTCAGATGAGGAAGGCTTGCTGCCCCCCAAGAAATTGCCGACCACGAGGAGAGGTCGGCAGGCTTCGAGAGGAGTGAGTGCTTCACGGCCGCGGAGGAACGCACAGGGTAGGTTCGTGTGCTCCAATACTCCGGCTGCCAGCAAAGCAGATAGTGACATGGGGGTCACTACCGAGGACCCTGGTGGCGAGAGCTGTGCCTCGCTAGGGAGCTCAAAGGCGGAGATCAACGCCGCCCGAAGAGAGCAGCGCAAAGCTGTCGCGGCCGACGAAGTGTCGGAAATGGCCCGACGCGCACGCGAGCGACGCGCTACTCTAGCGGCGGAAGGGGGGGAACCATCTGCGGTGGCCCTAAGTCAGCTTGCCTTGGACGGGGTGGACTTAGTCCTGAAGGTTGCCACCAAATCCGGCAGCCTGAAGGGCACGTTTACCCGCGGTCTGAAAGAAGCTGCCGCGGACATTAAGGAGGCGATTGGCATCCTCCTCAACAGAACGGCCTCTGACGAGGTTGCGAAGTTGCAGGAGGAAAACAGCCGTCTCCGAAATGATATGGAGGACCTCCGTCGACGAGTCACTGCGTTGAGCGAGCAGCAGCAGCGGCGTACGTCCACTGATGCCGCATCGGTAGTGGCCCCGGCTCCCGCACCGAGACCGACAAGCACTCATACCGACGACGAGGTCGAGCGCATTGTCCGGCTCTGTATGCTCCAGTGCGGGAGCATGGTCAATGCTCGTATGGAGGCAATTTCTCGGCGCCTCCCTGCGGAAATCCTCCGTCCGCCACTAGCGGCCGATACACGGCGGAGGGCTGAGGAGCCGCCGAGACCTAAGCCTAGGGAGGGGAAGCCCGCCGAGGGTGTTAAAAAGCCCGTCGAGGGAGCCCCATCGAGCGATCAGCCCACGACTGCTGGGTCTAAGGGTGAGACCTGGGTTACAGTCGTGGGCCGCAAGAAGGCACGCAGGGTCGCCAAGGCGGCCTCAGCAGCAACGCACGCCCCCGGCCAAACCGCAAAGGCGGTTGCGCAGCCTGCGCGGCGGGCTGCCAAAGGCGGTCGCAAAGGACCGGCGATACGTGCTCCGCGTTCCGAAGCTGTGACGCTCACGCTACAGCCCGGAGCTGCGGAGCGCGGCGTAACGTACCAGTCGGTCATCGCCGAAGCAAAGGCCAAGATCAAATTATCAGATCTTGGTCTCCAGGCCGTCACCCACAGGCAGGCTGCCACGGGTGCACGGTTGTTCGAGGTGGCTGGTACTACGAGTGGCAGTGCCGAAAAGGCGGACGCTCTGGCCGCCAAGATGAGGGAGGTCCTCAGCCCCGAGGACGTCCGGGTCTCCAGGCCAATGAAAACCGCAGAGGTGCGGATTGCTGGCCTGGATGACTCCGTGACCTCTGAGGAGGTGGTAGCGGCCGTTGCCCGAAGTCTACTCGCAGCCACCAGCAATGGCAGCCCAGAGACCATCAGAGTCGAGCGGCCATACTTCGACGATGTGTCTCCGAGGAACGTGTCCACCGTGGTGGGACAGTCAGCAGTCTTGCGCTGCAGAGCCAAGCATATAGGGAATAGAACTGTCTCTTGGATGAGAAAACGCGACCTTCACATCCTAACCTCCCACATATTCACGTACACCGGTGACGCCAGGTTCAGCGTTCTCCATCCCGAACCTTCGGACGACTGGGACTTGAAGATCGACTACGTTCAGCCGAGAGACGCGGGGGTCTACGAGTGCCAGATCAACACTGAACCTAAAATAAACATGGCGGTGGTTTTGAACGTGGAAGCTGCTGCGGCTACCATATGGGGCTCCCAGGACGTCTACGTGAAGAAAGGGAGCACAATATCGCTGACGTGTTCGGTGAACGTCCATTCGTCGCCACCCTCCAGCGCCTCGGTCTTGTGGTAA

Protein

MIRPEHLYIVSAAVIQKLWVNDPVGDGSVDLSSDEEGLLPPKKLPTTRRGRQASRGVSASRPRRNAQGRFVCSNTPAASKADSDMGVTTEDPGGESCASLGSSKAEINAARREQRKAVAADEVSEMARRARERRATLAAEGGEPSAVALSQLALDGVDLVLKVATKSGSLKGTFTRGLKEAAADIKEAIGILLNRTASDEVAKLQEENSRLRNDMEDLRRRVTALSEQQQRRTSTDAASVVAPAPAPRPTSTHTDDEVERIVRLCMLQCGSMVNARMEAISRRLPAEILRPPLAADTRRRAEEPPRPKPREGKPAEGVKKPVEGAPSSDQPTTAGSKGETWVTVVGRKKARRVAKAASAATHAPGQTAKAVAQPARRAAKGGRKGPAIRAPRSEAVTLTLQPGAAERGVTYQSVIAEAKAKIKLSDLGLQAVTHRQAATGARLFEVAGTTSGSAEKADALAAKMREVLSPEDVRVSRPMKTAEVRIAGLDDSVTSEEVVAAVARSLLAATSNGSPETIRVERPYFDDVSPRNVSTVVGQSAVLRCRAKHIGNRTVSWMRKRDLHILTSHIFTYTGDARFSVLHPEPSDDWDLKIDYVQPRDAGVYECQINTEPKINMAVVLNVEAAAATIWGSQDVYVKKGSTISLTCSVNVHSSPPSSASVLW

Uniprot

NA

ProteinModelPortal

NA

PDB

6EG0 E-value=2.06975e-37, Score=393

KEGG

101735642 no KO assigned | (RefSeq) transmembrane and immunoglobulin domain-containing protein 1-like

GO

GO:0005515 GO:0008234 GO:0016020 GO:0005509 GO:0005524 GO:0003909 GO:0051103 GO:0000049 GO:0005975 GO:0004553

Length:

664

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0048

Exp number, first 60 AAs:

0.00172

Total prob of N-in:

0.00028

outside

1 - 664

Pi

177.651471

Theta

189.00225

Tajima's D

0.275615

CLR

0.482628

CSRT

0.446777661116944

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree