SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12333  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009170
Annotation
mRNA_export_protein_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.014
 

Sequence

CDS
ATGTTCGGTAGTCAGATTAGCACGGGCTCGAACAACCCCAACAAGGACGTGGAGGTTTCCTCGCCGCCCGATGACACCGTGTCGGCCCTCGAGTTCTCGCCGCCCTCCGTCACTCTGCACACCTTCCTGATCGCTGGCAGCTGGGACTGCCAAGTGAGATGTTGGGAAGTGGAAACTTCGGGGAAAACAGTGCCTAAGGCTGCACAGCCTATGGATGGACCGGTCCTAGATGTCGCCTGGCATGATGATGGGACGAAGGTTTTTATGGCTTCAACAGACAAAAGTGTGAAGTGTTGGGACTTAGCAGCCAACCAAACGATGCAGGTAGCGGCGCACGACGCTCCAGTGAAGACTTGCCACTGGATCAAAGCGCCCAACTACACGTGCCTCATGACCACCTCCTGGGATAAAACTCTAAAGTTCTGGGACACGCGCACTGCAGTTCCGAGCATGACCCTCAATCTAACAGAGAGAGCGTACTGTGCTGATGTGGAGTACCCGATGGCGGTGGTCGGCACGGCAGACCGCGGCATCTGCATGTACACGCTGGAGGGCAAGCCCGCCGAGTTCAAGCGCATCGAGTCGCCGCTGAAGCACCAGCACCGCTGCGTCTCCATCTTCAAGGACAAGAAGAGCAAGCAGCCGACGGGCTTCGCGCTGGGCAGCGTGGAGGGCCGCGTGGCCATCCAGTACGTGAACCCGACCAACCCCAAGGACAACTTCACGTTCAAGTGCCACCGGACCACGGGAGCGGTGGGCGGCTACCAGGACATCTACGCCGTCAACGACATCGCCTTCCACCCGGTGCACGGCACGCTCGCCACCGTCGGCTCCGACGGCTCCTTCTCCTTCTGGGACAAAGACGCCAGAACCAAGCTCAAGAGCACCGAGCTCCTGGACCAGTCCCTCACCAAGTGTGCCTTCAACCACAGCGGCCAGATCTTTGCCTATGCAGTCGGGTATGACTGGTCTAAGGGTCACGAGCACTACAACCCCAATAAGAAGACGTTCATTTACTTGCGAGCATCTTACGAAGAACTCAAAGCGCGTCCGACACAATAA
Protein
MFGSQISTGSNNPNKDVEVSSPPDDTVSALEFSPPSVTLHTFLIAGSWDCQVRCWEVETSGKTVPKAAQPMDGPVLDVAWHDDGTKVFMASTDKSVKCWDLAANQTMQVAAHDAPVKTCHWIKAPNYTCLMTTSWDKTLKFWDTRTAVPSMTLNLTERAYCADVEYPMAVVGTADRGICMYTLEGKPAEFKRIESPLKHQHRCVSIFKDKKSKQPTGFALGSVEGRVAIQYVNPTNPKDNFTFKCHRTTGAVGGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKSTELLDQSLTKCAFNHSGQIFAYAVGYDWSKGHEHYNPNKKTFIYLRASYEELKARPTQ

Summary

EMBL
DQ311401    ABD36345.1    BABH01040444    KZ150386    PZC71063.1    AGBW02008387    + More
OWR53523.1    KQ460480    KPJ14340.1    KQ458842    KPJ04892.1    GAIX01003302    JAA89258.1    ACPB03019207    GDKW01001620    JAI54975.1    ODYU01010625    SOQ55861.1    GBBI01002298    JAC16414.1    GBGD01001990    JAC86899.1    GFTR01005329    JAW11097.1    GECL01002350    JAP03774.1    KK852570    KDR21151.1    GBHO01033142    GBHO01033140    GBRD01015305    GBRD01015304    GDHC01000227    JAG10462.1    JAG10464.1    JAG50521.1    JAQ18402.1    PYGN01000306    PSN48818.1    GBYB01012640    JAG82407.1    ATLV01023929    KE525347    KFB49976.1    NEVH01007816    PNF35585.1    NNAY01001423    OXU24029.1    AAAB01008986    EAA00182.3    APCN01003304    AXCN02001027    GEBQ01010613    JAT29364.1    AXCM01001727    LJIG01022515    KRT80168.1    GECZ01003246    JAS66523.1    GGFM01004067    MBW24818.1    GGFK01009795    MBW43116.1    GGFJ01006705    MBW55846.1    ADMH02002043    ETN59792.1    GDHF01031456    JAI20858.1    GAKP01001659    JAC57293.1    GAMC01005570    JAC00986.1    CH477418    EAT41290.1    GBXI01010503    GBXI01004969    JAD03789.1    JAD09323.1    GEZM01006611    JAV95685.1    CVRI01000067    CRL06833.1    DS232308    EDS39548.1    CM000071    EAL24950.1    GFDL01012786    JAV22259.1    CH479181    EDW31735.1    MWRG01005103    PRD29972.1    OUUW01000001    SPP73568.1    JXUM01050108    GAPW01002221    KQ561634    JAC11377.1    KXJ77936.1    CH963848    EDW73660.1    CH940648    EDW60268.1    AY118568    AAM49937.2    CM002911    KMY95605.1    CH933808    EDW10470.1    AE013599    AAF46745.1    JRES01001654    KNC21117.1    CH480824    EDW56659.1    KQ971354    EFA07536.1    CM000158    EDW91213.1    CH954179    EDV55484.1    JXJN01012717    CH916375    EDV98309.1    KA645517    AFP60146.1    CP012524    ALC41355.1    CCAG010005008    GADI01004584    JAA69224.1    AJVK01034701    CH902619    EDV37044.2    ABJB010185352    ABJB010271821    ABJB010465586    ABJB010699260    ABJB010705717    ABJB010912892    DS717671    EEC06313.1    GFWV01019273    MAA44001.1    GFJQ02007850    JAV99119.1    GDRN01068085    GDRN01068084    GDRN01068083    GDRN01068081    GDRN01068077    GDRN01068076    JAI64252.1    AAZO01005924    DS235823    EEB17788.1    GBXI01014470    JAC99821.1    AJWK01018073    IAAA01016879    LAA05651.1    JO842819    AEO34436.1    JO842818    AEO34435.1    GFAA01001901    JAU01534.1    GL451131    EFN79974.1    GBBM01001457    GBBM01001456    JAC33961.1    GFDF01003096    JAV10988.1   
Pfam
PF00400   WD40
Interpro
IPR036322   WD40_repeat_dom_sf        + More
IPR019775   WD40_repeat_CS       
IPR037631   Gle2/RAE1       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR020472   G-protein_beta_WD-40_rep       
SUPFAM
SSF50978   SSF50978       
Gene 3D
PDB
3MMY     E-value=5.06799e-142,     Score=1292

Ontologies

Topology

Length:
353
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00653
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.00594
outside
1  -  353
 
 

Population Genetic Test Statistics

Pi
20.475745
Theta
18.102523
Tajima's D
0.25571
CLR
0.521234
CSRT
0.449077546122694
Interpretation
Uncertain
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