SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12330
Pre Gene Modal
BGIBMGA009172
Annotation
hypothetical_protein_KGM_05660_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 3.063
 

Sequence

CDS
ATGTCTTTTAGGACACACGGCCGCAGATGTGAGAACGGTCTGTGCGTGGGCGTGGCGGCGCGCTGCAACGGCGCGGTGGAGTGCGCGGACGCGTCGGACGAGCGCGGCTGCGGGGCGCACACGTGCGGCGCGCTGGGGCCGGACGCGCTGTCCTGCCGCAACGGCTCGGGCTGCTACCTGCGCCTGTGGACCTGCGACGGGTACGCGGACTGCGCCGACGGCACCGACGAGCGCGACTGCGGGCACTACCACTCCGAAGCACCAACAACGGAAGTGATCGTGGACACATTCGAGGAGTTGACCCCGCAGCACTGCGACGAGGGTCAGTTCCGGTGCGGAGGCGACTCCGCGGCGCCCGCCGACGTCGCCGAGTGCATCCCCGCGGAGTGGCGCTGCGACGGACGCGTCGACTGCACGGACGGCAGCGACGAGGCACTGCACTGCGGTCACCGGGCGCACAACACGACGTGCGGCTCCCACACGTTCCACTGCGCGGGCGGCGCGTGCGTGCCGCTGGGCGCGCGCTGCGACGGCGCCGCGGACTGCGAGCACGCGGACGACGAGGCCGACTGCCCCTGCGCCCTCGACACCTTCGCCTGCGCCGGCTCCGGACTCTGTCTGCACGCTAACCTGTACTGTGACGGCGACGCGGACTGCGAAGACGGATCGGACGAGCCCGCGGGCTGCGTGTCCCCCGCGCCGCCCCCCACCGCGTCACCGCCCCCCACCTCGCACCCCTTGTGTGCCGCGATGTCCGGCTCGGTATACTGCGCCGGTAGGTGTATACCGAAAGAGTTAGTGTGCGACGGAAGGAACAACTGCGAGGACTCTGGGGGAAGCGGAGCGGGAACCGACGAAGATCCTTTGATCTGTAGTTCGTTCGCATCCGCGACGGGCAGCACTAGTCACGAGAGCGCCGGCGAATGCGAGCGAGGGGAGTGGCAGTGCGGAGACGGAGGCTGCGCCCCGCGAGACGCGCTCTGCGACGGCACGAGGGACTGTGAAGACTACACTGATGAGTTTCCTTGCGATATAAACGAGTGCGCCACACTGAACGGGGGGTGCTCGCACAACTGCACGGAGCTGCCGGTGGGGCGCGCGTGCTGGTGCCGGGCGGGCTGGCGCGGCAGCGGGACCGCGTGCGCGGACGTGGACGAGTGCTACGAGGACCAGCCCTGCGAGCAGCACTGCAGGAACACGCTGGGCAGCTTCGTGTGCTCGTGCGCGGCGGGCTACAGATTAGCGGACGACGGCGTCAGCTGCTCGCCGGTGTCGTCGATCAAGGCGTCCCTAGTGTTCACGAACCGATACTACATCCGGCGCGCGTCGCTGCACGCGGGGGCCAGCTCGCTGCTGGTGCACAACCTCACCAACGCGGTGGCACTGGACGCGCACTGGAGCTCCGGCTGTCTCTACTGGAGTGACGTCACCCTCCTCGGCTCCTCCATCAAGCGCCAGTGTCGACCTCGGGTAGGCCCTGCGACAGTCCTGCACGCGGCGACGCTGCAGAACCCGGATGGTCTGGCGGTGGACTGGGTGGGAGGCAATCTGTACTGGTGTGACAAAGGTACCGACACACTGGAGGTATCCCGTCTGGACGGTCGGCACCGTCGCGTGCTGCTCAGGGACGGGCTGCAGGACCCGCGGGCCCTCGCCCTGCTGCCCGCTCGCGGCTGGATGTACTGGTCGGACTGGGGCGCCTCCCCGCACATCGGCCGCGCCGGAATGGACGGCTCGAACAGACGACTGTTGATCACATCCGGACTGGGCTGGCCCAACGCCCTCACGCTATGCCACGCATCCAACGACCTCTACTTCGCCGACGCCAGGGAGGATTATATAGCTGTCGCCGATCTGGATGGCAACAATGTGCGGATTCTATTCTCTAGAGAGAGCATGCCGTGGCTGAGGCTGCACCACGTGTTCGCGATGAGCGTGTGGGAGGGCCGCGTGTACTGGAGCGACTGGGAGACGCGCGCCGTGGAGTCCTGTCGGCGGCGGCCGCGCCGGGGCTACAAGGAATCTAATGCAACGTTAGATCTGAGCACGGGAGGAGCCTACGAGTGCGAGGTGGTAGTGCACACTGTGCACAAGCCTATGGACCTCAGGATCTTCCACCCAGCACGTCAGCCACCACAACCCGAGATAACAGAGCTGTGTGCGTCGCTGAACTGCTCGGGGCTGTGCCTGCTGTCCCCGGCGGAGGGCGGAGTGCAGGCCCGCTGTGCGTGTCCGGAGCACTGGCTGCTGGCTGCCGACGGGCGCTCCTGCGTGCACAACTGTACCGCAGCACACTTCGTCTGTCGCACCACGCTCAAGTGCATCCCCTACTGGTGGCGATGCGACACTCAGGACGACTGCGGCGACGGTTCGGACGAGGGAGCTCACTGCCCGAAGTTCTGGTGCTCGCCGGGACAGTTCCAGTGCGACGGGTCTCGCTGCCTCCACCCGGGATACATCTGCGACGGCACTCCGCACTGCGCCGACCGCAGCGACGAGCGGGACTGCGACCGCTTCACCTGCCTCGCCGCGCAGTGGAAGTGCCGCGGCAACAGCACCGCGCGCGTGTCCGCCCGCTGCGTGCCCGGCGCCGCACGCTGCGACGGCGTCAGCGACTGTCACGACGGCGACGACGAGCTAGACTGTCCGCCGCGCACCTGTCCACCGCACCAGTTCGAATGTGGCGACGGAGCGTGCGTGCCGCTAGTGTGGGTGTGCGACGAGGACTGGGACTGCGCGGACGGGTCGGACGAGCGGGCCGCGTGCGAGGAGCGCGCGTGCGGGCGGGACGAGTTCCGGTGCGGCTCGGGGCGCTGCGTGCCGCGGGCCTGGCGCTGCGACGGCGAGCCGGACTGCCCGGGCCGCGAGGACGAGCGCGCCTGTCCGCCGCCGCCGCGCTGCGACCCCACCTACTTCCGCTGCGGGGACGGGCGCTGCGTGCCGGGCCGCTGGCGGTGCGACGGCGAGGACGACTGCGGGGACGCCGGCGACGAGCTGGGCTGTGCGCCGCGCCGCTGCTCCGAGTCCGAGCAGCGCTGCGGGACCGGCGAGTGCGTGGCGCGGGCGCTGCGCTGCGACGGCGCGCCGCACTGCGCCGACGCCAGCGACGAGGCCGACTGTGCCGGCCGCTGCGGACCGGGCTCCAGGCCTTGCGCCGACAATAAGCAATGCGTTCTCAACGAGTGGTGGTGCGACGGGTCGTGGGACTGCGGAGACGGGTCGGACGAAGCGCGGTGCGGGGTGCAACAGTGCGGAATGCGGATGGAGTGCGGGGCGCGGTGCGAGCCCCCCGCCTGGCGGTGCGACGGTCGCCAGGACTGCCCCGGAGGGACCGACGAAGAGACACAGCACTGTGCCGCTGCCGCTTGTCATCCGGACATGTTTCGGTGCGGCGACCACACGTGCGTGCCGGGCGCGCTGCTGTGCGACGGGCACCGCGACTGCGCCGCCGGGGAGGACGAGGCCGCCTACACCTGTGCAGGAAAAAATGTGAGGGGCGCGGAGAGGGAGTGCATCGCGGGAATCGAACCCTGCGCGGACACCGGTCTGAACAAAGCCTGTAAATGGGACACGTGCTCGCAGCTCTGCGTGCCGAAACAAAACAATCACACGTGCAAGTGTGTCCCGGGATACAAGCAACGTCAGCTGTCCGACGGCACGCTCACGTGTGAAGTCGTCAGCGGAGAAAAGCCCACGGTGCTGGTATGTGAGGGGGGCGGGGTGCGGGTGTGGGAGCCGCGGAAGGAGCCCGTCGCGCGACCCTCCTCCATCCGCAACAACTACACGTACGGCACGCACGCTCACACACACACACAAGCACACACCGGACACGCAACACATTGTGAAGGTTGCTACAGAGCGGAGATAAACGCGATCGCCGGAGCATACATAAACGGCACATGGTGGGCGTGGTGGGGGGAAGAGGGGGGCGCCCTCGTCAGGCGGAACATATCCGACATGATGCGGGACAAGACCATGCAGGCCAACCAGGGCGAGATACTTCTACACGAGGAGGGCAGCATCCGAGGAGTGACCATAGACTATGTGTCCGGGCGCATATACTGGACGGTGTCCGGGACGGGTGCGGGGGCGCGCGGGCGCGGGGCCGTCGCCCCGGGAGGACACGAGGGGGCGCTCCGGGTCGCCGGCCTGGATGGTCGCCGCCGCGTCACCTTGTATTCGCGACGCGGCGCCGAACCTGATGATGTTATCTTTTCTAACCTAACCAGATACATTTACTGGTCGGACCGGGGCTCGTCCCCCGGGGTGTACCGGCTGGGGGCGGCGGGGGGGCGCGCGGAGGCGCTGGTCCGGGGCCGCGTGCGCCGCGTCACCGCACTCACGCTGCACGAGGAGGGCGCCCGCCTGTACTTCGTGGATGGATACTACGGTACTCTCGAGACGGTCAGAACGGACGGCTCCGGGAGGACCCTGCTGGCGGAGTTCAGGCTCAGACCTCATGGTGCACCAATTGCACCTCATGTATATCAGGATGGAGAGCTGATGTCTCGCAGCGCGACGTCGGGTCCGGTCCGCAGCGTGTGGTGGCGCGCGTGTGTGCGGCTGCGGGTGTGGGAGGAGTGGGTGTGGTGTGGCGCAGGGCGGGGGCTGGCGAGGGTGCGACGCCGCCCCCTTCCCGCCACACCTGACCTGCCCCGTGCGCCCCCATCACGGCCCCTGCGCTTGCCGCCCCTCACTGCGCTGACTCTATTGCATCCCATCATGTTTACTTCGAGTCCGGACCCGTGCGAGCAGGCGTGCGACGCGAGCGCGCTGTGTGTCCGCACCGAGCGGGACCCCGGACACGACTGTCTCTGTCCAGACGGACTCACGCAAAGGGAAATCAAGGGTCGTCGGCAATGCGTGATTCCTTCAGGCGAAGTTCCCAACACCACAACATCCGGTGGATCATCGTGTCCTCTCCGGTGCGGGGCGGGGACCTGCGAGGAGGCGGGGGGTCTGCCGCGGTGTCGGTGCCCCCCGCTGTACGCCGGCCCGCACTGCCAGCACTACCGCTGCGCGCACTACTGCCACCTGCACGGACGCTGCATGCTCGACGTCGAGGCGACGAGCCACAACGCCGTCGAAGCCACCGATAACTCCACCGCGCTGCCCCCGCTCAAGTGCATCTGTAACCCTGGATATACGGGCCCGCGCTGCGAGTCGGCGCTGGAGGTGGCGGACCCGTGCGCGTCGGTGCGCTGCCGGAACGGGGGGACGTGCCGGCGCGGGGCGGGGGGCGCGCAGTGCGAGTGCGGCGCGCGGTACGCCGGCCCGCACTGCGAGCTGTGCGCCGGGGAGCCGCCCTGTCCCCCCGGCACGGCGTGCACGCACACGGACGCCGGCCCCTACTGCAACACCACGGAATGTCAAGACTTCTGTTTAAACCAGGTCAGTACTAAAGACATGTCATGA
Protein
MSFRTHGRRCENGLCVGVAARCNGAVECADASDERGCGAHTCGALGPDALSCRNGSGCYLRLWTCDGYADCADGTDERDCGHYHSEAPTTEVIVDTFEELTPQHCDEGQFRCGGDSAAPADVAECIPAEWRCDGRVDCTDGSDEALHCGHRAHNTTCGSHTFHCAGGACVPLGARCDGAADCEHADDEADCPCALDTFACAGSGLCLHANLYCDGDADCEDGSDEPAGCVSPAPPPTASPPPTSHPLCAAMSGSVYCAGRCIPKELVCDGRNNCEDSGGSGAGTDEDPLICSSFASATGSTSHESAGECERGEWQCGDGGCAPRDALCDGTRDCEDYTDEFPCDINECATLNGGCSHNCTELPVGRACWCRAGWRGSGTACADVDECYEDQPCEQHCRNTLGSFVCSCAAGYRLADDGVSCSPVSSIKASLVFTNRYYIRRASLHAGASSLLVHNLTNAVALDAHWSSGCLYWSDVTLLGSSIKRQCRPRVGPATVLHAATLQNPDGLAVDWVGGNLYWCDKGTDTLEVSRLDGRHRRVLLRDGLQDPRALALLPARGWMYWSDWGASPHIGRAGMDGSNRRLLITSGLGWPNALTLCHASNDLYFADAREDYIAVADLDGNNVRILFSRESMPWLRLHHVFAMSVWEGRVYWSDWETRAVESCRRRPRRGYKESNATLDLSTGGAYECEVVVHTVHKPMDLRIFHPARQPPQPEITELCASLNCSGLCLLSPAEGGVQARCACPEHWLLAADGRSCVHNCTAAHFVCRTTLKCIPYWWRCDTQDDCGDGSDEGAHCPKFWCSPGQFQCDGSRCLHPGYICDGTPHCADRSDERDCDRFTCLAAQWKCRGNSTARVSARCVPGAARCDGVSDCHDGDDELDCPPRTCPPHQFECGDGACVPLVWVCDEDWDCADGSDERAACEERACGRDEFRCGSGRCVPRAWRCDGEPDCPGREDERACPPPPRCDPTYFRCGDGRCVPGRWRCDGEDDCGDAGDELGCAPRRCSESEQRCGTGECVARALRCDGAPHCADASDEADCAGRCGPGSRPCADNKQCVLNEWWCDGSWDCGDGSDEARCGVQQCGMRMECGARCEPPAWRCDGRQDCPGGTDEETQHCAAAACHPDMFRCGDHTCVPGALLCDGHRDCAAGEDEAAYTCAGKNVRGAERECIAGIEPCADTGLNKACKWDTCSQLCVPKQNNHTCKCVPGYKQRQLSDGTLTCEVVSGEKPTVLVCEGGGVRVWEPRKEPVARPSSIRNNYTYGTHAHTHTQAHTGHATHCEGCYRAEINAIAGAYINGTWWAWWGEEGGALVRRNISDMMRDKTMQANQGEILLHEEGSIRGVTIDYVSGRIYWTVSGTGAGARGRGAVAPGGHEGALRVAGLDGRRRVTLYSRRGAEPDDVIFSNLTRYIYWSDRGSSPGVYRLGAAGGRAEALVRGRVRRVTALTLHEEGARLYFVDGYYGTLETVRTDGSGRTLLAEFRLRPHGAPIAPHVYQDGELMSRSATSGPVRSVWWRACVRLRVWEEWVWCGAGRGLARVRRRPLPATPDLPRAPPSRPLRLPPLTALTLLHPIMFTSSPDPCEQACDASALCVRTERDPGHDCLCPDGLTQREIKGRRQCVIPSGEVPNTTTSGGSSCPLRCGAGTCEEAGGLPRCRCPPLYAGPHCQHYRCAHYCHLHGRCMLDVEATSHNAVEATDNSTALPPLKCICNPGYTGPRCESALEVADPCASVRCRNGGTCRRGAGGAQCECGARYAGPHCELCAGEPPCPPGTACTHTDAGPYCNTTECQDFCLNQVSTKDMS

Summary

EMBL
GEBQ01028226    JAT11751.1    LJIG01009388    KRT83179.1    GL732587    EFX73914.1    + More
GFAC01001250    JAT97938.1    GEZM01079393    JAV62450.1    GEZM01079395    JAV62448.1    JXJN01003725    JXJN01019940    CCAG010003495    GDIQ01206278    JAK45447.1    GDIP01008066    JAM95649.1    GDIP01166108    JAJ57294.1    GDIQ01032244    JAN62493.1    GDIQ01001475    JAN93262.1    LRGB01002485    KZS07405.1    GDIP01085272    GDIP01085271    JAM18443.1    GDIP01141114    JAL62600.1    GDIP01045778    JAM57937.1    CH902619    KPU75782.1    EDV35697.2    CH916367    EDW00789.1    CP012524    ALC40900.1    JRES01001007    KNC26180.1    JRES01000402    KNC31657.1    GDIP01162559    JAJ60843.1    CM002911    KMY92227.1    KMY92226.1    AE013599    AAF59114.4    CH954177    EDV59554.2    AGB93333.2    CH480816    EDW46899.1    CM000157    EDW89311.2    GAKP01022407    JAC36545.1    GDHF01021000    JAI31314.1    GAKP01022406    JAC36546.1    GEFM01004451    JAP71345.1    GAMC01021262    JAB85293.1    AXCN02001027    CH963850    EDW74689.2    CH940648    EDW60815.2    GAMC01021260    JAB85295.1    DS231875    EDS41782.1    KRF79634.1    CH933808    EDW10162.2    OUUW01000001    SPP73726.1    SPP73728.1    SPP73727.1    SPP73725.1    NEVH01007419    PNF35707.1    CM000071    EDY68770.2    GDIP01039679    JAM64036.1    CH477418    EAT41289.1    CH479181    EDW31592.1    GFPF01010801    MAA21947.1    GFTR01009010    JAW07416.1    GEFH01001623    JAP66958.1    JXUM01023022    JXUM01023023    JXUM01023024    JXUM01023025    JXUM01023026    KQ560649    KXJ81450.1    AXCM01000340    JH432122    GACK01001177    JAA63857.1    GACK01002026    JAA63008.1    GBRD01017774    JAG48053.1    ACPB03005873    GBRD01017773    JAG48054.1    AAAB01008986    APCN01003303    EAA00393.5    GBBI01004517    JAC14195.1    ATLV01023929    KE525347    KFB49978.1    GGLE01005853    MBY09979.1    DS235785    EEB16983.1    AJWK01018073    AJWK01018074    AJWK01018075    AJWK01018076    AJWK01018077    AJWK01018078    AEYP01080291    AEYP01080292   
Pfam
PF00008   EGF        + More
PF00057   Ldl_recept_a
PF00058   Ldl_recept_b
PF07645   EGF_CA
PF12662   cEGF
PF16472   DUF5050
PF07974   EGF_2
Interpro
IPR001881   EGF-like_Ca-bd_dom        + More
IPR000033   LDLR_classB_rpt       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR018097   EGF_Ca-bd_CS       
IPR013032   EGF-like_CS       
IPR011042   6-blade_b-propeller_TolB-like       
IPR000742   EGF-like_dom       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR023415   LDLR_class-A_CS       
IPR026823   cEGF       
IPR032485   DUF5050       
IPR007527   Znf_SWIM       
IPR003645   Fol_N       
IPR013111   EGF_extracell       
SUPFAM
SSF57184   SSF57184        + More
SSF57424   SSF57424       
Gene 3D
PDB
3M0C     E-value=2.60379e-76,     Score=732

Ontologies

Topology

Length:
1804
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00178
Exp number, first 60 AAs:
0.00014
Total prob of N-in:
0.00009
outside
1  -  1804
 
 

Population Genetic Test Statistics

Pi
18.458596
Theta
17.87644
Tajima's D
0.061454
CLR
1.294535
CSRT
0.390280485975701
Interpretation
Uncertain
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