Gene
KWMTBOMO12325
Pre Gene Modal
BGIBMGA009175
Annotation
PREDICTED:_non-canonical_poly(A)_RNA_polymerase_PAPD5-like_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.579
Sequence
CDS
ATGAGTCAGTGGGAGAAGCTCCCGCTCTGGACTCTGGAGCGGGAGCTCGTGGTGCAGGATATTGCAGAGAAGGAGAGCATCAAGGTGCTCGAGAAGGCCACCGTGCCCATCGTCAAGATGACCGACAAATATTCTGATGTTAAAGTGGACATATCTTTCAACATGAGCAGCGGCGTGAAGAGCGCCGAACTTATCAAACATTTCAAGGAGAAATACCCAGTCCTTTCTCGACTGGTGATGGTCCTGAAGCAGTTTCTCCTGCAGCGAGACCTGAACGAAGTGTTCACTGGAGGCATCTCCTCGTACTCCCTGATCCTCATGTGCATCAGCTTCCTGCAACTGCACCCTCGGCCCGAGCGCCTGAGGCAGCCCAACAACCTGGGCGTCTTGCTCATCGAGTTCTTCGAACTCTACGGCAGGAAATTTAACTACGTGAAAACCGCCATCAGAGTCAAGAACGGCGGCTCCTACGTCTCCAAGGACGAGATACAGAAGGAGATGAACGACGGTCACCGTCCGTCGCTGCTGTGCATCGAGGACCCGCTGACGCCGGGCAACGACATCGGCCGCTCCTCCTACGGCGCCCTGCAAGTCAAGCAGGCCTTCGACTACGGGTACATCGTGCTGCAGCAGGCGGCGGCGGCGGGCGCGCCGGGCGTGCTGGGCCGCGTGCTGCGCGTCACCGACCACGTGCTGCAGTACCGCCGCTGGGTGCGCGACACCTTCCACCCCTACTTCTTCCCGCCGCCCGCGCCGCCGCGCCCGCACGACGACTCCGACCAGGTCCGCACCGCCACACGTCGCGCCACGCCACGCCCCGCCCCGCCCCGCCACGCCACGCCCGCGCTGTACCAACTGTGCGTGTTGCAGGAGTGGTCGTCCGGCTCGGTGTCGCCGCCGCCCGCAGCGCCGTCCCCGCCGGCCGCCGCGCCCTCCCCGCCGCCGCTGTCGGCGCTGCAGTGCTCGTCGCCCACCCCGCGCCGCGTCTCCGCGCACCAGAGCCTCATAATACACCACATCACCAGCAACTCCGACTTCAACAACATCCCCTCCGGCGTGATCCAGCGCTACGGCACCGCCGAGCCCAGCAAGGCGCGCCCGCAGCGCCCCCTGTCCGCCAAGCAGCGCCGCCAGCCGTCCCCCCACGGCGCCCCCTCCCCCGCGGTGCACGGGGGGCCGGGGGGGCCGCGCCGGGGGGCCGACCGCCACAAGAAGCGGCGCCACTTCACGCAGCGCTCCGACAAACTGATACGTCTGAACCTTGCAGATGTGTCACAGCTCTGCTACTCTGTCGTGCAGACAACTCTGCCATTAAATTTGCACAAGTCCGCGTGTCCCACAGTGGAGGGGGACGCACGTGGGGTGCCACCGCGGCCCCCCCGGCAGTATCTGGACGTAGCGCGTCCCCCCGGCGTGTCCCCCGGCGCGTCCACCCAGCGGACGGACAAGGAGATCATGTCTCTAAAGTGTATCACATTGACGGTGGAACAACGTGGCCACGTGATCGCGCCCGCCCCCGCCCGCCGTGATCTGCCGCACCACACTGTGTATCAGATTTCTGCCTATTTCTGCCGCGCTGTAGTCATGCGGCATGCAACAGTACCGCCTGACTCACGTGGCACATTCACTGTATGGGCCCGGCAAAAAAACATCACATAG
Protein
MSQWEKLPLWTLERELVVQDIAEKESIKVLEKATVPIVKMTDKYSDVKVDISFNMSSGVKSAELIKHFKEKYPVLSRLVMVLKQFLLQRDLNEVFTGGISSYSLILMCISFLQLHPRPERLRQPNNLGVLLIEFFELYGRKFNYVKTAIRVKNGGSYVSKDEIQKEMNDGHRPSLLCIEDPLTPGNDIGRSSYGALQVKQAFDYGYIVLQQAAAAGAPGVLGRVLRVTDHVLQYRRWVRDTFHPYFFPPPAPPRPHDDSDQVRTATRRATPRPAPPRHATPALYQLCVLQEWSSGSVSPPPAAPSPPAAAPSPPPLSALQCSSPTPRRVSAHQSLIIHHITSNSDFNNIPSGVIQRYGTAEPSKARPQRPLSAKQRRQPSPHGAPSPAVHGGPGGPRRGADRHKKRRHFTQRSDKLIRLNLADVSQLCYSVVQTTLPLNLHKSACPTVEGDARGVPPRPPRQYLDVARPPGVSPGASTQRTDKEIMSLKCITLTVEQRGHVIAPAPARRDLPHHTVYQISAYFCRAVVMRHATVPPDSRGTFTVWARQKNIT
Summary
Uniprot
ProteinModelPortal
PDB
3NYB
E-value=6.66495e-31,
Score=336
Ontologies
GO
Topology
Length:
552
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.18848
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09113
outside
1 - 552
Population Genetic Test Statistics
Pi
30.054576
Theta
25.855598
Tajima's D
0.314598
CLR
0.470944
CSRT
0.463226838658067
Interpretation
Uncertain
