SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12312
Pre Gene Modal
BGIBMGA009167
Annotation
PREDICTED:_beta-1?3-galactosyltransferase_1-like_[Bombyx_mori]
Full name
Hexosyltransferase      
Location in the cell
PlasmaMembrane   Reliability : 3.986
 

Sequence

CDS
ATGAGGATGACGAATGTATTTTTTTTGACCAATACATTTAGGAAAATAATAATGCGTCGGAGGATTTTTGTAATTCTACCGTTCTTGTTGGGATTGGGAGTCACCATTGTGGCCTGTAGATGGACGGCCGCCGTTGTCAGCCACGTCCTCCTACCACCAGGTCCGCCGGATCAAAACTTGGAGCATTTCATTAGGAATAGAAGTTTAAGTCACTATTTTGATAATATTCAAATCCTCATAGAGCCGTCCGCGCCTTGCCCAGGGTCGGACATTCCTGTGGTAGCGTTGGTAGCTACGACGCCATCACGGTTTGACCAGAGACAAGCCATCAGAGAGACGTGGGCTAAACGTGTGCTTACTTACTTCTTTATGGGCTTGGAAGGAGGGAAAATCGATGAAAGTATGGTAGATATCTACGTAGAAGCCAAGGAACACAGCGATATGGTAATATTGAACTTCCACGAACATTATCAGAATTTAACCTTGAAGACTGGCTTCATGCTGAAGTGGACTCTAGAGCGATGTGCTAACGCCAATTTCCTACTTAAAATCGACGACGATGTCTTCTTAAATCCTTGGAACTTGGAGCAGGTAATGAGGGGAAAGGAACGTCACAAATTGATTGGATACAAAATCAAGGATTCAACTGTACACCGAGATCAGTATACGAAATGGTACTTACCCCGGTGGCTGTATAGCCGTGATGTGATCCCGGAATATCTGGCCGGACCGGCCTATGTCGTAAATACGAAGCACATCGCGGAGATTTTACAGGAAGCAAAGAAGACACCGCTGATCAATTTAGAAGATGTATATTTTACTTATCTAGTCTCCAGGGAAGGTTTGGACTTTGAATTGACTCACGAAAGAACTTTCAGCCCGCACAAGCCCTTCCTGCTGTGCTCATATTGGAGCCTCACGACTGTTCACAGTGTATCTGATACAGAAATGCTAAGCGCTTGGAAAAGTTATAATGACGACGCCAAACAAAATAGTACTTTATGTGGCTTTCGCTTTCCGCCGCTGCGATGA
Protein
MRMTNVFFLTNTFRKIIMRRRIFVILPFLLGLGVTIVACRWTAAVVSHVLLPPGPPDQNLEHFIRNRSLSHYFDNIQILIEPSAPCPGSDIPVVALVATTPSRFDQRQAIRETWAKRVLTYFFMGLEGGKIDESMVDIYVEAKEHSDMVILNFHEHYQNLTLKTGFMLKWTLERCANANFLLKIDDDVFLNPWNLEQVMRGKERHKLIGYKIKDSTVHRDQYTKWYLPRWLYSRDVIPEYLAGPAYVVNTKHIAEILQEAKKTPLINLEDVYFTYLVSREGLDFELTHERTFSPHKPFLLCSYWSLTTVHSVSDTEMLSAWKSYNDDAKQNSTLCGFRFPPLR

Summary

Similarity
Belongs to the glycosyltransferase 31 family.
Feature
chain  Hexosyltransferase
EC Number
2.4.1.-
EMBL
BABH01035415    BABH01035416    BABH01035417    BABH01035418    KZ149926    PZC77573.1    + More
AGBW02013665    OWR43011.1    ODYU01000582    SOQ35617.1    KQ459193    KPJ03014.1    KQ461072    KPJ09844.1    PZC77572.1    GFDF01001521    JAV12563.1    GFDF01001520    JAV12564.1    KK852868    KDR14684.1    PYGN01000882    PSN39731.1    GFDF01001522    JAV12562.1    UFQT01000546    SSX25140.1    AJWK01009855    UFQT01001689    SSX31430.1    MWRG01000716    PRD35503.1    JO841942    AEO33559.1    GEZM01073266    JAV65214.1    GEZM01073267    JAV65213.1    AYCK01007049    AJWK01014243    AJWK01014244    AJWK01014245    AJWK01014246    IAAA01006731    LAA02283.1    KK113146    KFM59461.1    GEZM01073265    JAV65215.1    AGCU01071748    MNPL01025622    OQR68222.1    AAGJ04042979    AAGJ04042980    ABJB010038347    DS707924    EEC05674.1    HACA01016372    CDW33733.1    GECU01025553    GECU01017482    GECU01010824    GECU01003970    GECU01002151    JAS82153.1    JAS90224.1    JAS96882.1    JAT03737.1    JAT05556.1    GBYX01432142    GBYX01432141    JAO49172.1    CM004480    OCT67823.1    AGCU01010850    GGFK01008277    MBW41598.1    ADMH02001755    ETN61166.1    GGFK01008212    MBW41533.1    GGLE01005877    MBY10003.1    GEBQ01010233    JAT29744.1    GEGO01006900    JAR88504.1    GFPF01007899    MAA19045.1    GGFJ01005361    MBW54502.1    GCES01009426    JAR76897.1    GGFJ01005235    MBW54376.1    GGFJ01005234    MBW54375.1    GGFM01008381    MBW29132.1    AEFK01088243    KQ041052    KKF31012.1    CP026254    AWP10851.1    MWRG01014020    PRD24815.1    GL194300    EFB23269.1    AEFK01102680    GBYB01013193    JAG82960.1    KQ435700    KOX80499.1    HAEA01008761    SBQ37241.1    GBYB01013192    JAG82959.1    HADY01020286    SBP58771.1    GACK01007555    JAA57479.1    HAEF01013857    SBR55016.1    CAAE01014638    CAG01317.1    HADW01017882    HADX01008529    SBP19282.1   
Pfam
PF01762   Galactosyl_T        + More
PF00060   Lig_chan
Interpro
IPR002659   Glyco_trans_31        + More
IPR029044   Nucleotide-diphossugar_trans       
IPR001320   Iontro_rcpt       
IPR001508   Iono_rcpt_met       
SUPFAM
SSF53448   SSF53448       

Ontologies

Topology

Subcellular location
Golgi apparatus membrane  
Length:
343
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.8597899999999
Exp number, first 60 AAs:
22.81959
Total prob of N-in:
0.99974
POSSIBLE N-term signal
sequence
inside
1  -  21
TMhelix
22  -  44
outside
45  -  343
 
 

Population Genetic Test Statistics

Pi
18.284772
Theta
16.584217
Tajima's D
0.096424
CLR
3.116836
CSRT
0.401129943502825
Interpretation
Uncertain
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