Silkworm Genome Informatics Database

Gene

KWMTBOMO12305 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009120

Annotation

putative_coracle_[Danaus_plexippus]

Location

Bomo_Chr20(-):11832494-11895503 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.568

CDS

ATGCCGGAGAGCGTGGCCAAGGACAGCAAGGAGGATGCGAAGACGAAGAACAAAGAGTCGCCGAGGCGACGCCCGACCGGCAACGTCGCCAAGGTCAAGGTGGAGCTGCTCGATGGATCTAACATGGAATTGGATGTCGATCGTAAAATCCGCGGACACGAGCTGCTGAACAAAGTGTGCGACAACCTTAACCTGGTCGAGAAGGATTACTTCGGACTGCTCTACGCCGATAGAGGAGATCCCCGGGTGTGGATCGATCTCGACAAACGGGTCTCAAAAATGCTGAAACATGAACCGTGGTTCTTAAGGTTCGCCGTAAAATTCTACCCACCGGAGCCAGCGCAGCTGCAGGAAGAATTAACGAGATACCAGCTTGTTTTGGCGGTTCGCAGGGATCTACTTGATGGTCGCCTACCCTGTTCGTCAGTAACGCACGCACTACTGGCCAGCTACCTTCTCCAATCTGAACTTGGCGATTATGAGGATACGGAAGTCGGTGCCGGTCTGTGCAAGCAACTCAAGCTGGTCCCACCGTCATCTTGCACTCAGGAGTTAGAGGAAAAGGTCGTAGAACTACACAAGACACACAGGGGTCAGACACCGGCGGAGGCCGAATTGAATTATTTGGAGAATGCGAAGAAGCTCGCCATGTACGGGGTAGACCTCCATCCAGCCAAGGACTCGGAGAATGTCGATATCACGCTAGGAGTTTGCTCGTCTGGTCTTCTTGTGCATAGAGAGAAGCTCCGCATAAATCGGTTCGCGTGGCCGAAAATCCTGAAGATCAGCTACAAACGGCACAACTTCTACGTGAAGCTGCGGCCGGGCGAGTTCGAGCAGTTCGAGTCGACGGTCGGCTTCAAGCTCGCCAACCATCGCGCCGCCAAGAAGCTGTGGAAAACATGTGTAGAACATCATACGTTCTTTAGGTTGATGTCGCCCGAGCCGGCAGCCCGCAGCTCCCTGTTCCCGCGGCTCGGCTCGCGCTTCCGGTACAGCGGCCGCACCCAGTACGAGTCGCGCCGCGCCGCCGCGCCCCGCGCGCCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGCATGGACGGTACGTAGACGCCCCCCCCCCGCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCCGCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCTCGCCTCGCGCCATGGACGGTACGTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCGCCCCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCGCCCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTTCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTTCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTTCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTCCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGGTACGTAGACGCGCCCCCCGCCCCGCCCCGCCCCGTGCGCCCCGCACTTCACGCGCACGCTCTTCGCGCGCCGCCTCGCCTCGCGCAGCATGGACGCCCGCTAGTCTCGGCGCGCGCCGTGCTGCCGCCCGGGGGCCGACCCGCCTTAGGAACTCGAATGTAA

Protein

MPESVAKDSKEDAKTKNKESPRRRPTGNVAKVKVELLDGSNMELDVDRKIRGHELLNKVCDNLNLVEKDYFGLLYADRGDPRVWIDLDKRVSKMLKHEPWFLRFAVKFYPPEPAQLQEELTRYQLVLAVRRDLLDGRLPCSSVTHALLASYLLQSELGDYEDTEVGAGLCKQLKLVPPSSCTQELEEKVVELHKTHRGQTPAEAELNYLENAKKLAMYGVDLHPAKDSENVDITLGVCSSGLLVHREKLRINRFAWPKILKISYKRHNFYVKLRPGEFEQFESTVGFKLANHRAAKKLWKTCVEHHTFFRLMSPEPAARSSLFPRLGSRFRYSGRTQYESRRAAAPRAPPHFTRTLSARRLASRSMDAWTVRRRPPPARPVRPALHAHALRAPPRLAQHGRYVDAPPAPPPPVRPALHAHALSPRAMDGTSPRAAWTVRRRAPAPPPRAPRTSRARSPRAASPRAAWTVRRRAPRPAPPVRPALHAHALRAPPRLAQHGRYVDAPPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPPPAPPRAPRTSRARSPRAASPRAAWTVRRRAPRPARPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRYVDAPPAPPRPVRPALHAHALRAPPRLAQHGRPLVSARAVLPPGGRPALGTRM

Uniprot

NA

ProteinModelPortal

NA

PDB

3BIN E-value=1.77653e-104, Score=973

KEGG

101742298 K06107 erythrocyte membrane protein band 4.1 | (RefSeq) protein 4.1 homolog

GO

GO:0005856 GO:0005737 GO:0008092 GO:0019898 GO:0003924 GO:0019538 GO:0030145 GO:0000049 GO:0005975 GO:0004553

Length:

935

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00056

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00004

outside

1 - 935

Pi

20.400159

Theta

19.738273

Tajima's D

-0.945901

CLR

1.819675

CSRT

0.142592870356482

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics