Gene

KWMTBOMO12301

Annotation

PREDICTED:_protein_4.1-like_[Bombyx_mori]

Location

Bomo_Chr20(+):11772814-11773818      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.615

CDS

ATGAGCTACAACAAGCGCTCGTTTACCCTGAAGCTGCGGGCCAGCGAGTTCGATGAGTTCGAGACGGACGTGAGCTTCAAGCTGCCCTCGACGAGAGCTTGCAAGAAGCTGTGGAAGTGCAGCGTGGAGCATCACATATTTTTTAGACGAGAGGCTCCGGTGTCTGTCCCGGGTCGGCACGGAGCCTGGGGCTCTCCGTCCTGCCGCCGCACGCTCCGCCAGCTGCGGGCGCGCCCACCACACCTGACCTCCTGA

Protein

MSYNKRSFTLKLRASEFDEFETDVSFKLPSTRACKKLWKCSVEHHIFFRREAPVSVPGRHGAWGSPSCRRTLRQLRARPPHLTS

Uniprot

A0A2A4J0H2   A0A2H1VWK5   A0A0N1IFE0   A0A194QDI0   A0A2W1BR31   A0A212EJP0   + More
A0A3Q1AZV1   A0A3Q1FU61   A0A3Q1CYY0   A0A3Q1FWB0   A0A1A8QDM7   A0A3Q1GVE9   A0A3P8UCE1   A0A3Q1AZV9   A0A1A7XFM6   A0A3Q1FUF4   A0A3Q3BNI0   A0A1A8KQT2   A0A1A7WGJ3   A0A3Q3BNJ3   A0A3Q3BBV2   A0A1A8MR75   A0A3Q3FHL2   A0A3P8U774   A0A087XC40   A0A0S7FI64   A0A3Q3MFD5   A0A1A7X9H2   M3ZF02   A0A3P9DE65   A0A3P9DER4   A0A3P9DET3   A0A3B5QJ86   A0A3Q1CE99   A0A3Q1B9W1   A0A3Q3BUN3   A0A3Q2WU39   A0A3Q2V7L6   A0A146ZZW1   A0A3Q2V7M3   A0A146W3I4   G3PWM6   A0A1A8BFX1   A0A3Q3QZ59   A0A0S7FMI2   A0A3Q3X9M5   A0A1A7WC69   A0A0S7FL82   A0A1A7ZSP6   A0A3P9P1M3   A0A3P9P1F3   A0A3B3TP05   A0A1A8INH6   A0A2I4D336   A0A1A7ZVA3   A0A3Q4BYX4   A0A3P9P1I4   A0A3Q3LJF7   A0A2I4D316   A0A2I4D314   A0A3Q3L6G9   A0A3P9P1C3   A0A2I4D323   A0A2I4D327   A0A2I4D328   A0A3Q3LHW3   A0A3B4U2H2   A0A2I4D341   A0A2I4D332   A0A2I4D333   A0A3P8U7A9   A0A0S7FGK0   A0A3B3XS50   A0A2I4D329   A0A0S7FED0   A0A1A8JLG7   A0A3B3XSL8   A0A2I4D318   A0A3Q3LHT5   A0A1A8QW15   A0A1A8SGU9   A0A3B3V5X4   A0A1A8CX57   A0A2I4D324   A0A1A7Y674   A0A1A8JJM0   A0A1A7XDM2   A0A3Q2CCZ0   A0A1A8QQJ2  

Pubmed

26354079    28756777    22118469    23542700    25186727   

EMBL

NWSH01004116    PCG65481.1    ODYU01004882    SOQ45210.1    KQ461072    KPJ09834.1    + More
KQ459193    KPJ03025.1    KZ149926    PZC77562.1    AGBW02014435    OWR41694.1    HAEI01005029    SBR91462.1    HADW01015250    SBP16650.1    HAEE01013959    SBR34009.1    HADW01003697    SBP05097.1    HAEF01017805    SBR58964.1    AYCK01010049    GBYX01466100    JAO15515.1    HADW01013183    SBP14583.1    GCES01014818    JAR71505.1    GCES01061735    JAR24588.1    HADZ01001857    SBP65798.1    GBYX01466102    JAO15513.1    HADW01002207    SBP03607.1    GBYX01466098    JAO15517.1    HADY01007309    SBP45794.1    HAED01012425    SBQ98819.1    HADY01008322    SBP46807.1    GBYX01466103    GBYX01466099    JAO15512.1    GBYX01466096    JAO15519.1    HAEE01000901    SBR20917.1    HAEH01013564    SBR97717.1    HAEI01014978    SBS17447.1    HADZ01019474    SBP83415.1    HADX01003566    SBP25798.1    HAEE01000285    SBR20301.1    HADW01014555    SBP15955.1    HAEH01012735    SBR95548.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000257160    UP000257200    + More
UP000265080    UP000264800    UP000261660    UP000028760    UP000002852    UP000265160    UP000264840    UP000007635    UP000261600    UP000261620    UP000242638    UP000261500    UP000192220    UP000261640    UP000261420    UP000261480    UP000265020   

Pfam

PF00373   FERM_M        + More
PF09380   FERM_C
PF09379   FERM_N
PF05902   4_1_CTD
PF08736   FA
PF04382   SAB

Interpro

IPR019747   FERM_CS        + More
IPR018979   FERM_N       
IPR011993   PH-like_dom_sf       
IPR019748   FERM_central       
IPR018980   FERM_PH-like_C       
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR035963   FERM_2       
IPR000798   Ez/rad/moesin-like       
IPR021187   Band_41_protein_chordates       
IPR014847   FERM-adjacent       
IPR030691   Band4.1-L3       
IPR008379   Band_4.1_C       
IPR007477   SAB_dom       

SUPFAM

SSF47031   SSF47031        + More
SSF54236   SSF54236       

Gene 3D

1.20.80.10     2.30.29.30    

CDD

cd14473  FERM_B-lobe

ProteinModelPortal

A0A2A4J0H2   A0A2H1VWK5   A0A0N1IFE0   A0A194QDI0   A0A2W1BR31   A0A212EJP0   + More
A0A3Q1AZV1   A0A3Q1FU61   A0A3Q1CYY0   A0A3Q1FWB0   A0A1A8QDM7   A0A3Q1GVE9   A0A3P8UCE1   A0A3Q1AZV9   A0A1A7XFM6   A0A3Q1FUF4   A0A3Q3BNI0   A0A1A8KQT2   A0A1A7WGJ3   A0A3Q3BNJ3   A0A3Q3BBV2   A0A1A8MR75   A0A3Q3FHL2   A0A3P8U774   A0A087XC40   A0A0S7FI64   A0A3Q3MFD5   A0A1A7X9H2   M3ZF02   A0A3P9DE65   A0A3P9DER4   A0A3P9DET3   A0A3B5QJ86   A0A3Q1CE99   A0A3Q1B9W1   A0A3Q3BUN3   A0A3Q2WU39   A0A3Q2V7L6   A0A146ZZW1   A0A3Q2V7M3   A0A146W3I4   G3PWM6   A0A1A8BFX1   A0A3Q3QZ59   A0A0S7FMI2   A0A3Q3X9M5   A0A1A7WC69   A0A0S7FL82   A0A1A7ZSP6   A0A3P9P1M3   A0A3P9P1F3   A0A3B3TP05   A0A1A8INH6   A0A2I4D336   A0A1A7ZVA3   A0A3Q4BYX4   A0A3P9P1I4   A0A3Q3LJF7   A0A2I4D316   A0A2I4D314   A0A3Q3L6G9   A0A3P9P1C3   A0A2I4D323   A0A2I4D327   A0A2I4D328   A0A3Q3LHW3   A0A3B4U2H2   A0A2I4D341   A0A2I4D332   A0A2I4D333   A0A3P8U7A9   A0A0S7FGK0   A0A3B3XS50   A0A2I4D329   A0A0S7FED0   A0A1A8JLG7   A0A3B3XSL8   A0A2I4D318   A0A3Q3LHT5   A0A1A8QW15   A0A1A8SGU9   A0A3B3V5X4   A0A1A8CX57   A0A2I4D324   A0A1A7Y674   A0A1A8JJM0   A0A1A7XDM2   A0A3Q2CCZ0   A0A1A8QQJ2  

PDB

3BIN     E-value=3.94812e-11,     Score=157

KEGG

105841612    K06107 erythrocyte membrane protein band 4.1 | (RefSeq) protein 4.1-like

GO

GO:0005856   GO:0008092   GO:0007016   GO:0005911   GO:0005886   GO:0001558   GO:0003779   GO:0005198   GO:0030866   GO:1904889   GO:0016021   GO:0019898   GO:0003924   GO:0019538   GO:0030145   GO:0000049   GO:0005975   GO:0004553  

PANTHER

PTHR23280:SF12   PTHR23280:SF20  

Length:

84

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.41176

outside

1  -  84

 

 

Pi

16.256893

Theta

19.990755

Tajima's D

-0.602316

CLR

1.843424

CSRT

0.218139093045348

Interpretation

Uncertain