SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12290
Pre Gene Modal
BGIBMGA009126
Annotation
PREDICTED:_oxidative_stress-induced_growth_inhibitor_1-like_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.78
 

Sequence

CDS
ATGAAGGACAGCATGAGGAGTTGTGAACACGTGCTGACAGACGATGTGGAGTACAAGGAAGTGGTCGTGATAGGAAATGGGCCCAGCGGTATGGTGACCTCATTCATGCTGGACGGCAATGTACCATACCTCAAACAGATACCAGAAGACTTGCCAATTGACGAGATGCTCAGAGCCAGACTTTCAAACCTTCCCGAAGGCCAGAGCCTGTACGACGCAGACCTCGCGGAGTTGGCCGAGGGATTGGAAGGCAGAAGTCAAAACCCGATACCTATATTGATGGACGCTCTCCTGAGGCCTTGCGCGGACCTGGGCGTCCAGGCCGACTCGCTCATCGAGTGGCGCTACGAGAGCGACAAGCAGATAGACCATGTGGTGTTAGGGCAGGGCCCGCCGGGGGGCGCCTGGCACACGTTCCCGCCCGACGTGCGCACGCTGTCCCCGGCGGCCTGGCTCACGCTGCCCCCGCACACGGACGGCGGCGCGGAGCGGCTGTCGGCGCGGGCCGTCGCCAACTACTGCAGGAGATACGTGCACGCCTGCAAGCTGCAGGTATGGACCCCCGCCACCGTTGCACCCTGGATGGGCTCTCTAGCCACCACTGAACCCTGGATAGGTTCTCTAGTAAACGTTTCGTGA
Protein
MKDSMRSCEHVLTDDVEYKEVVVIGNGPSGMVTSFMLDGNVPYLKQIPEDLPIDEMLRARLSNLPEGQSLYDADLAELAEGLEGRSQNPIPILMDALLRPCADLGVQADSLIEWRYESDKQIDHVVLGQGPPGGAWHTFPPDVRTLSPAAWLTLPPHTDGGAERLSARAVANYCRRYVHACKLQVWTPATVAPWMGSLATTEPWIGSLVNVS

Summary

EMBL
RSAL01000012    RVE53456.1    KQ461072    KPJ09824.1    KQ459193    KPJ03032.1    + More
AGBW02008171    OWR54063.1    APCN01001971    AXCM01005958    GEZM01009493    GEZM01009492    JAV94562.1    GEZM01009494    JAV94561.1    JXUM01029045    JXUM01029046    KQ560840    KXJ80659.1    GAPW01000288    JAC13310.1    GEDC01016959    JAS20339.1    AJWK01025482    AJWK01025483    GFDF01009820    JAV04264.1    PYGN01000811    PSN40456.1    GECZ01019566    GECZ01004285    JAS50203.1    JAS65484.1    GECU01025539    GECU01009704    JAS82167.1    JAS98002.1    GAHY01000044    JAA77466.1    GDKW01002055    JAI54540.1    GFTR01005465    JAW10961.1    GBBI01001117    JAC17595.1    GECL01001167    JAP04957.1    LJIG01000599    KRT86341.1    NEVH01023952    PNF17931.1    LNIX01000002    OXA58881.1    GFJQ02002300    JAW04670.1    LJIJ01000306    ODM98978.1    HADW01007793    SBP09193.1    HAEH01018062    SBS07109.1    HAEI01007190    SBS00746.1    HAED01016334    SBR02779.1    HADZ01008895    HAEA01009726    SBP72836.1    HAEF01002592    SBR39974.1    HAEB01021154    HAEC01005459    SBQ67681.1    JH882006    ELR51405.1    HAEE01014271    SBR34321.1    JARO02005005    KPP67507.1    AMGL01027220    AMGL01027221    GCES01040428    JAR45895.1    AYCK01017041    AYCK01017042    BC112571    AAI12572.1    AANG04002512    AERX01019607    AKHW03005795    KYO25435.1    GFJQ02004072    JAW02898.1    KQ434864    KZC09069.1    HADY01019997    HAEJ01014376    SBP58482.1    JH431850   
Pfam
PF13434   K_oxygenase        + More
PF07992   Pyr_redox_2
Interpro
IPR029731   OKL38_fam        + More
IPR036188   FAD/NAD-bd_sf       
IPR029729   F30B5.4       
IPR025700   Lys/Orn_oxygenase       
IPR029724   OSGIN1       
IPR023753   FAD/NAD-binding_dom       
SUPFAM
SSF51905   SSF51905       
Gene 3D

Ontologies

Topology

Length:
212
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.66984
Exp number, first 60 AAs:
0.26726
Total prob of N-in:
0.23080
outside
1  -  212
 
 

Population Genetic Test Statistics

Pi
29.121588
Theta
26.275906
Tajima's D
0.190125
CLR
0.518492
CSRT
0.421928903554822
Interpretation
Uncertain
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