SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12281
Pre Gene Modal
BGIBMGA009153
Annotation
PREDICTED:_uncharacterized_protein_LOC101738843_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.843
 

Sequence

CDS
ATGCCTAGAACCAAACGTCCTGTACGGAAGCAAGACAAAACAGTTGAAGATGATGATACATTGAAAAAGTTGAACAAACTTGTACTCGATGAAAAGAACGTTATAGACTCCAGGACACAAATGGAAATACGTAATGTTGAATTGGCCTTCAAGATTCTGTTGGGTTCGATCAGCAATAAGTACTTGCAAAAGACTGTCGGTGAATTAAAAACAGAATTACACCTCCAAGAAGTAACGACGAACACAAGGCAAACAAGGAATTCAAGCAGATCTGCCTCACATGATGATGGCTACCTCACCGAGAACTCATCACAGGGCTCCGGGGAAAGAGTCTCCAAGAAATATCTGTCGGTACCGAAGTCTGCGAGTCGAGCCGCGCCTCGGCGGTCGCGCTCGGCGGCGCGCCCCCCCCGCCCCACCGCCGCCCCCTCCCTCAGCGCGCCCCGCCGCCGCTCGCGCTCCGTGTACCGCACCCCCGCCTGCAATAAGAATGCGTCGACGTACTACCCTGCAATCACGCCTAAGGTGACCCCTCAGACACCCCTGACGGTTTTGAGGCAGCCCCGTCAAGGAGAGATGGTTGTATCGATGTCTGGCTCTCCAGTTATGGTGCCGACGTGTTACACAATGCAACCTGACGAGATGGCCAATTGCAATATACTGCTTCAAGATGGCACAATGCTCTCCCTTCAACCAAAGCAACTGAGGCAGTCGCAGGCCTACATCCCGTTCTCATTGATGGACACAAACGTTCTTAACCAGCTGAAGACCTTGAAGGATAATCTGGATAAAGTAGTCAAGTTGGGAGAGAAAGTCATGAAGTGA
Protein
MPRTKRPVRKQDKTVEDDDTLKKLNKLVLDEKNVIDSRTQMEIRNVELAFKILLGSISNKYLQKTVGELKTELHLQEVTTNTRQTRNSSRSASHDDGYLTENSSQGSGERVSKKYLSVPKSASRAAPRRSRSAARPPRPTAAPSLSAPRRRSRSVYRTPACNKNASTYYPAITPKVTPQTPLTVLRQPRQGEMVVSMSGSPVMVPTCYTMQPDEMANCNILLQDGTMLSLQPKQLRQSQAYIPFSLMDTNVLNQLKTLKDNLDKVVKLGEKVMK

Summary

Pfam
PF10512   Borealin        + More
PF10444   Nbl1_Borealin_N
Interpro
IPR018867   Cell_div_borealin        + More
IPR018851   Borealin_N       

Ontologies

GO

Topology

Length:
274
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00974000000000001
Exp number, first 60 AAs:
0.00233
Total prob of N-in:
0.25242
outside
1  -  274
 
 

Population Genetic Test Statistics

Pi
33.870868
Theta
30.534821
Tajima's D
0.33055
CLR
0.585923
CSRT
0.468676566171691
Interpretation
Uncertain
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