SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12272
Pre Gene Modal
BGIBMGA009149
Annotation
PREDICTED:_uncharacterized_protein_LOC101741571_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.834
 

Sequence

CDS
ATGTGTCGCCATCTAGTGGTCACCCAGGTGCAGTGTCCGACGCCAGAAGCGCCTCGCCACGGCAAGGCGGTGTACACGTCCTTTGCGTACAACTCTGTGGTTTCATACGAGTGCAAGTATGGGTACCGGCTCGTTGGGGACGCCACAAGACGCTGCGGAGCTGACAAGAAATGGTCTGGAACCCAACCGCTTTGCAAAGAAATTAACTGCGGCCACCCTGGTCAGCTCTGGAATGGATGGCTGGAGAATATCTCCTCAGGGACAGGTCTGGGAGCCTCCATCATCTTTCGCTGTCAAGACGGGATGAAGATGGGAGGGAATGGGTCTGCAATATGTCAGAGCGACGGCACTTGGAGTCATCCCCTACCTCAATGTTTGGCGCCGTGCGTCGTTCCACACGTCTCTCAAGGCCGTATAGTCCTCGTTAATAACGAGACAACGAACGATAATACGACTGAGCAGCCGAACACTCAGATCGTGGGGAGCTCATCCATGGTGCAGCACGGTGAGATAATTATGGTTGATTGCGAGAAAAACTATGAGTTCCCTTCGAACAATGCGGCCGTGACATGCAAAAACGGAACATGGACGCAGATACCTAGATGTCAGCCCGCAAGATGCAAGAAAATGCCCAAGTACCCTCGCAACGGTATGGTGATAGCTCCTAAAACGGATCACGGCATGAAGGCCAGGTTTCGGTGCAAGGACGGCTACGAAATGAAGGGGAACCCAATTGTCGTCTGCTCCTTCGGGAACTGGAGCGGAGAAACGCCGAAATGTGAAGAAGGTAATGTGTCACGGGATCAATTGAATTGCAAATACAAAACGACTTTTAAACTCTGCACGACATGCTTTGTGTGTATGTGTAGCTTCTTAGATGTAGAATAG
Protein
MCRHLVVTQVQCPTPEAPRHGKAVYTSFAYNSVVSYECKYGYRLVGDATRRCGADKKWSGTQPLCKEINCGHPGQLWNGWLENISSGTGLGASIIFRCQDGMKMGGNGSAICQSDGTWSHPLPQCLAPCVVPHVSQGRIVLVNNETTNDNTTEQPNTQIVGSSSMVQHGEIIMVDCEKNYEFPSNNAAVTCKNGTWTQIPRCQPARCKKMPKYPRNGMVIAPKTDHGMKARFRCKDGYEMKGNPIVVCSFGNWSGETPKCEEGNVSRDQLNCKYKTTFKLCTTCFVCMCSFLDVE

Summary

EMBL
NWSH01007328    PCG63004.1    KZ150040    PZC74577.1    ODYU01009216    SOQ53483.1    + More
KQ459193    KPJ03047.1    KQ461154    KPJ08636.1    BABH01035330    BABH01035331    KQ459399    KPJ01115.1    GEZM01062345    JAV69800.1    KB631888    ERL86911.1    GEZM01062346    JAV69798.1    KQ971351    EFA07479.2    APGK01035096    APGK01035097    APGK01035098    APGK01035099    KB740923    ENN78175.1    PYGN01000148    PSN52793.1    GECZ01011098    JAS58671.1    GEBQ01002517    JAT37460.1    ADMH02001723    ETN61301.1    GEDC01013744    JAS23554.1    DS231817    EDS39639.1    AXCN02000706    JXUM01123578    JXUM01123579    JXUM01123580    JXUM01123581    JXUM01123582    JXUM01123583    JXUM01123584    JXUM01123585    KQ566733    KXJ69876.1    AXCM01006212    CH477570    EAT38880.1    AAAB01008964    EAA12905.5    APCN01005201    LBMM01001784    KMQ95745.1    GL451914    EFN78276.1    GL762047    EFZ22353.1    GL888273    EGI63579.1    KQ976749    KYN08809.1    KZ288230    PBC31645.1    CVRI01000014    CRK89749.1    KQ435036    KZC14069.1    KQ976641    KYM78780.1    ADTU01021582    KK107327    QOIP01000013    EZA52509.1    RLU15427.1    KQ980765    KYN13399.1    GL442888    EFN62807.1    KQ981744    KYN36212.1    AJWK01021849    AJWK01021850    ATLV01021263    KE525315    KFB46208.1    KQ982691    KYQ52245.1    KQ435855    KOX70651.1    GDHF01008898    JAI43416.1    GAMC01014792    JAB91763.1    GAMC01014791    JAB91764.1    GFTR01008792    JAW07634.1    KQ414661    KOC65541.1    GAKP01014125    JAC44827.1    GAKP01014124    JAC44828.1    GBXI01004357    JAD09935.1    GDHF01020062    JAI32252.1    GDHF01016842    JAI35472.1    AE014134    AAF53815.3    CH480822    EDW55773.1    CH479184    EDW37139.1    CH940654    EDW57675.2    CM000158    EDW90429.1    KRJ99173.1    KRF77885.1    CH379058    EAL34377.1    DS235165    EEB12752.1    CM002910    KMY91032.1    KMY91033.1    CH954179    EDV54642.1    AAN11047.1    ACL83048.2    ACZ94302.1    BT053732    ACK77650.1    CH963857    EDW76217.2    CP012523    ALC38017.1    CH933807    EDW12391.2    JRES01000300    KNC32615.1    CH902620    EDV32031.1    CH916372    EDV98774.1    OUUW01000006    SPP82324.1    GBYB01006352    JAG76119.1    QCYY01001698    ROT76043.1    ACPB03005098    ACPB03005099    ACPB03005100    ABLF02033062    ABLF02033063    CM000361    EDX05526.1   
Pfam
PF00084   Sushi        + More
PF00095   WAP
PF00400   WD40
PF13401   AAA_22
Interpro
IPR000436   Sushi_SCR_CCP_dom        + More
IPR035976   Sushi/SCR/CCP_sf       
IPR036179   Ig-like_dom_sf       
IPR008197   WAP_dom       
IPR013783   Ig-like_fold       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR003593   AAA+_ATPase       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR027417   P-loop_NTPase       
IPR019775   WD40_repeat_CS       
IPR007110   Ig-like_dom       
SUPFAM
SSF57535   SSF57535        + More
SSF48726   SSF48726       
SSF50998   SSF50998       
SSF52540   SSF52540       
Gene 3D
PDB
3GAW     E-value=3.10717e-15,     Score=198

Ontologies

Topology

Length:
295
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07996
Exp number, first 60 AAs:
0.00301
Total prob of N-in:
0.05946
outside
1  -  295
 
 

Population Genetic Test Statistics

Pi
15.607255
Theta
19.812166
Tajima's D
-0.737947
CLR
0.314934
CSRT
0.187490625468727
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号