SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12265
Pre Gene Modal
BGIBMGA009137
Annotation
PREDICTED:_oxysterol-binding_protein-related_protein_6_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.406
 

Sequence

CDS
ATGAGTCAAAGCGGCAAGCATGCGAACGACACGCTCCACGAGAACAAACGGGAGCGGCGGCGTGGCGCGGCTGGTAGGGCGGCGGCGCTGCGCAGGGCTCCATCCGACTCTGATTGTTCCGGTGAGACAGCCTCACTGTCCGCAGACAGCGGTGACAGGATCGTCAAGCCTCAGGTAGCTCCCCCAAGGAGCGGGAAGTCTCGCAGTCGTCGTCGTGGCAGCGAGTGGGAAGTGCTCGAAGGCCTTAAGGATGGCCAGCGCTTCGAGAAGAGGCCGGACGTCTTCAACGGGTATTTGCATAAGAAGAGGAAATGGCCGTTAAAAGGATGGCACAAGAGGTTCTTCGTAGTAGACGGCGGTATATTAGTCTACGCGCGTTCACCGGCCGACGTGGCCCGCGGTCGGCTCCACGGCTCGGTGGATGTCGGTCTGTCGGTCATCTCGGCCAAGGCTAGACGGCGCCGCATCGACATAGACGCGGACGAGTTCATATACCACTTGAGGGCGAAAACTCCGGATGTTTTCAGGACTTGGCTCAGTGTGCTTAAAGCTCACAGGTTGTACCGTCAACACCTCTTAACCTTTGGAGCCAGGGAGTCTGCACCCAAGATCAATGCTCCTCTTGACGACCCGGCCGCGACCGACACGTCTTCCCGTGTATATGATACTTCAAAATCTACAAGTGACGTAACCGAATTTAATGCTTCTATGAGACTCACTGAATTCAACAGCAAAACGCTTAATGGTTCGATACCAATCGAATTTGATCCTATGAAAGATTTAAAAACATTTACGAATGATGATCACATCGTCAAAGTATATTCAATGCCCAAATCGAATACAGAAAACGGCACAGACATTGTTAGTGATAAGAAATTGGGTGCAAATAATAAACCACGCTATAAAGAAAGAGATTCAGTCTGTCTTAAATCTGTAGATACGAAAGCTCTAATTCATTTAAGACAAACGAACAAAATTGTTAACGCAGTTGTGAATAAACAAAATATGCAATGTTATTTCTTCAGAAAGAAATGTCAGAATAATTCCGTAATGAGGAGATCGAGGAAATCGACTAATCTCGTAAAATATAGAAATGAGTGTGAGGAACCGAAGCTGCGGAGGCCATTAGGCAATTACATGTTGCTTGGCGAACAGACGAGCGAACGAAAACGCGACGGGGCGAACAGACCTGAGATACTTGATAAACGTAATGAAATTCGTGTTAATACAACAGATTCTAAACACAATAAAATTGTCGATAGACTAGTAGATTTCGTATTCAAGGATACTGGTAAAGAAAGAGATTTGAGGACGAATATAAGTAAAATAATCAAGGAAGTATTAGAAAAGGATTGTGATAAAACCAAATATCCCGTGAAAGCTATGTTTAGAACTCTCATAGAATTCTGGTTGGACAGTGTCGATGTGAAACAGTGTAAGGAAACGATAAAAATATCTAAATCGACTAACACAAAATCTAAAAGTTCCACTAGAGATGTTAATTTATCGGGTATTGGCATCGGATATAAGAGTCACGCTACCCAGTTTGGTTTCGGTGATTTGGTACACGAATTCAAATCTAACAAGTTTTCACGTAAGGGTGCGAATGAAAAAAATATTTCGCCGGTTTTCCATAGTCCTATACGAGATACGGATAGCTACGAAAAGGAGCGCCGAATCCAAGAACTGGAGAGACCGCTCAATAACACGATCTACGTTTGCGATACCGTACGCAGCAAAAGTCGCGAGAGAGACATTAAAATAACGAAAACCTTAATCGACAATTTGAATAACAAAACGAACCTGTCCGACTATAATGACACTTCGAATTCCTCAAACGAAATACCTAAAATACAGTACACGATCAAAAAACTCATAAGCGAAGCCTCGGTGCCGGCTGAGATTGCCGAAGACTTTCTGAACGCCTACCTGGGCGTGCTGGAGGACAGTTTGAATACTACAGACTCGAGCATAAACTTCAGTGTCAGCGAAACGGCTCCTGCGTGTGACGTTCTAACCGAAGAGGTTGTTAAGAAAGTATCTAAAAGTATATCGGCATGCGAAATGTCACCAGCTAATCGTGTCTCGAATCTCGAAGGCAATAATTCTAGCCATTACGTGAAAGATGTTTTAAACAGAGTCGCTATGATATTTTCAAAACAAAAAGAAAACGAAAGAGAATGGTCTAGTAAAGACAAGGAAACCGATGAAAAACAAGAGGTTTTACAAGACACCATGAAAGAATTAGCTAGAGAAAATCTATGGCTGGTAAGTCCCACGACAGCCACGATTAGAGGACCGCAATTCGTATCCGGCACGCCCGGCGGACGACTCGCCAGTTGGATCATCGAATCCGGTGGTCCACTGGAGAACGCCTCACGTGAGCTGGGACAAGCTCAGCTGTCCGTACAGCAGCTGCAGAGGCTGCTGGATGCGCTGGAGATGCAACAACAAGTCCATCACGATACAGACGTGTCACTGGACGGCGCTTCGCCGAACGTGAAGAAGGATCGCCGCAAGTTCGGTCTCCGCAAGAAGAAGTCGAACAGTAAATGCGCTTCCATTGAACTCACCGCTTCGCACATCGACCCGTCTAACTCGCACATGGCCCTCTCAGCACTGACCGCGCCTCCATCCCCGGGCGGCGGTGCGTCGTCCATACCTAACTCGGCTGCTTCGCTACCCATAGCATGTGCCGCGGCAAGACCACAGTCGCTTCCCGGAGCCGAGGCCTTCGGGCCAACCGCGGGGCCGGCCTCGATCTCCAGTCTGACTCCTGACCACCAGCTGAGGGAAGACTTCACGGTTCTGGCCAAAGATTTGGTCGCCAGCTTGAAGACCATCGTCGCCACAATGGTTTGTGAACGCAGTCGCCTTAGGGCCGCCATGGAGGCCGCAGACTCGAACGGCTCGGCGGGAGGGTCCGTCGTGTCTGCACTTCGAACCAACCTGACGTCGGCTCTGCAACAGAATTCTGAGTTGAGGTCCCGCCTGTCCAGGATCCACCTGGCCTCCGACATCGCAGAGATCGGCTCCGTGGGACCTGCTGATGCGGTGAACCGTCCATTCCAGCAGTCTCTCAGCTACAGCTCGTCCTGCGTGTCTGCTTCGGAGTTCTTCGACGCGGAGGAGCATGAAGATGACGATCTAAAACATGAAGAAATCATTGCGGCTGATGAGAGCGGCGTCATAGAACTGGACGGTGACTCCTCGTCGGAAGCCGGATCCTTGAGCAGCGAGGAGGGCTCGGCGAGCTCGGACAACTCTGAGGGCGCCACGGGTACGGGGGAGGTGCGGGCGCGCGCGGGGGGCTGGTCGCGGCGCACGCGGCTGCCCGCCCCGCGCCCCGCCGCCGCGGCGCCCACCGTGTGGAACCTGCTCTACAAGAACATCGGGAAGGACCTGAGCCAGATATCCATGCCGGTCACCATCAACGAGCCCCTCAACATGCTGCAGCGTCTATGCGAAGAGTTGGAGTACTCGGAGCTGCTGGACGCGGCGGCGGAGTGCGGCAGCCCGGTGGAGCGCATGTCGCTGGTGGCCGCCTTCGCAGTCTCGGCCTACGCGGCCTCCGCGCACCGCGCCGCCTCCAAGCCCTTCAACCCGCTGCTGGCCGAGACCTACGAGTGCATCCGGGACGACCGCGGCTTCCGGTTCATTGCTGAACAGGTCTCACACCACCCCCCCATATCAGCGTGCCACGCGGAGTCTAGCCGCTGGTGCTTCTGGCAGGAAGCCCGCATCAAAACCAAGTTCTGGGGGAAATCGATGGAGTTCCAGCCGACGGGGCGGGTGCACGTCCGGCTGAAGACCACCGGCGATCATTACACTTGGAACAAGGTGACGACGTGCGTGCACAACCTGTTCGGCGGCCAGCGCTGGGTGGACCAGTACGGCGACATGCACATCGCCTGTGTCGGCGCCGACATCACGTGCAAACTCAACTTCGTCAAGGCCAGCTCGTGGTCCAGCAGCCGGCACGAGGTGCGCGGCAGCGTGTCCGGCGCGCACAACGTGCGGCTCGGCGGGCGCTGGTCCGAGGGTCTGCACGCCGGGGACCCGCCCGCCGCCCGGCCGCTGTGGAGACCCGGCGCCATGCCTCCCGACCATGAGCTGTACTACGGGTTCACGCGCTTCGCCATGGAGCTCAACGAGCTGGAGCCCGGCATGCGCGAGCTGCTGCCCCACACCGACACCAGGCTCAGGCCGGACCAGCGCGCTCTGGAGGAGGGCGACGTCGAGGCCGCCGAGCAGCTCAAGCACGAGCTGGAGCAGGCGCAGCGCGAGCGGCGCCGGGCGCGCCCCGACCACGCGCCCGCCTGGTTCCGGGCAGGAATAAGCAGAGCGGTGGTGGTACCTACCCGCGCGGACTCACAAGAGGTCCTACCACCACCAGTAATTACGCAAATTATAATTTTACAGCAAAACGGCGAGCGGCGGCGAGGAGACGTGGCAGTTCGCGGGCGAGTACTGGGCGGCCAGGGACAGCGGCTTCCCGAACCTCAGCGCGCCCAGGATCTGGTGACGTGCGGCTCCGCACCACCGCCTCCCGTCGCGCGAGGTGCTCTGCTAACGGCTTGGCCCCCCGTCGCGCGAGGTGCACTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTTGGCCCCCCGTCGCGCGAGGTGCACTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTTGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCCGTCGCGCGAGGTGCTCTGCTAACGGCTCGGCCCCCGTCGCGCGAGGTGCTCTGCTAA
Protein
MSQSGKHANDTLHENKRERRRGAAGRAAALRRAPSDSDCSGETASLSADSGDRIVKPQVAPPRSGKSRSRRRGSEWEVLEGLKDGQRFEKRPDVFNGYLHKKRKWPLKGWHKRFFVVDGGILVYARSPADVARGRLHGSVDVGLSVISAKARRRRIDIDADEFIYHLRAKTPDVFRTWLSVLKAHRLYRQHLLTFGARESAPKINAPLDDPAATDTSSRVYDTSKSTSDVTEFNASMRLTEFNSKTLNGSIPIEFDPMKDLKTFTNDDHIVKVYSMPKSNTENGTDIVSDKKLGANNKPRYKERDSVCLKSVDTKALIHLRQTNKIVNAVVNKQNMQCYFFRKKCQNNSVMRRSRKSTNLVKYRNECEEPKLRRPLGNYMLLGEQTSERKRDGANRPEILDKRNEIRVNTTDSKHNKIVDRLVDFVFKDTGKERDLRTNISKIIKEVLEKDCDKTKYPVKAMFRTLIEFWLDSVDVKQCKETIKISKSTNTKSKSSTRDVNLSGIGIGYKSHATQFGFGDLVHEFKSNKFSRKGANEKNISPVFHSPIRDTDSYEKERRIQELERPLNNTIYVCDTVRSKSRERDIKITKTLIDNLNNKTNLSDYNDTSNSSNEIPKIQYTIKKLISEASVPAEIAEDFLNAYLGVLEDSLNTTDSSINFSVSETAPACDVLTEEVVKKVSKSISACEMSPANRVSNLEGNNSSHYVKDVLNRVAMIFSKQKENEREWSSKDKETDEKQEVLQDTMKELARENLWLVSPTTATIRGPQFVSGTPGGRLASWIIESGGPLENASRELGQAQLSVQQLQRLLDALEMQQQVHHDTDVSLDGASPNVKKDRRKFGLRKKKSNSKCASIELTASHIDPSNSHMALSALTAPPSPGGGASSIPNSAASLPIACAAARPQSLPGAEAFGPTAGPASISSLTPDHQLREDFTVLAKDLVASLKTIVATMVCERSRLRAAMEAADSNGSAGGSVVSALRTNLTSALQQNSELRSRLSRIHLASDIAEIGSVGPADAVNRPFQQSLSYSSSCVSASEFFDAEEHEDDDLKHEEIIAADESGVIELDGDSSSEAGSLSSEEGSASSDNSEGATGTGEVRARAGGWSRRTRLPAPRPAAAAPTVWNLLYKNIGKDLSQISMPVTINEPLNMLQRLCEELEYSELLDAAAECGSPVERMSLVAAFAVSAYAASAHRAASKPFNPLLAETYECIRDDRGFRFIAEQVSHHPPISACHAESSRWCFWQEARIKTKFWGKSMEFQPTGRVHVRLKTTGDHYTWNKVTTCVHNLFGGQRWVDQYGDMHIACVGADITCKLNFVKASSWSSSRHEVRGSVSGAHNVRLGGRWSEGLHAGDPPAARPLWRPGAMPPDHELYYGFTRFAMELNELEPGMRELLPHTDTRLRPDQRALEEGDVEAAEQLKHELEQAQRERRRARPDHAPAWFRAGISRAVVVPTRADSQEVLPPPVITQIIILQQNGERRRGDVAVRGRVLGGQGQRLPEPQRAQDLVTCGSAPPPPVARGALLTAWPPVARGALLTARPPVARGALLTARPPVARGALLTAWPPVARGALLTARPPVARGALLTARPPVARGALLTAWPPVARGALLTARPPVARGALLTARPPVARGALLTARPPVARGALLTARPPSREVLC

Summary

Uniprot
ProteinModelPortal
PDB
5ZM5     E-value=1.35224e-59,     Score=588

Ontologies

GO

Topology

Length:
1655
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0228599999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00083
outside
1  -  1655
 
 

Population Genetic Test Statistics

Pi
23.14251
Theta
22.82009
Tajima's D
-1.149245
CLR
1.244897
CSRT
0.110744462776861
Interpretation
Uncertain
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