SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12261  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012520
Annotation
TP53-regulating_kinase_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 1.973
 

Sequence

CDS
ATGACTGAAGATTTGAAGATATTAAAACAAGGAGCTGAAGCAAAATTGTACATTTGCAATTATCTTGGAAGACCTACATTGATCAAGGAAAGGTTCGTTAAAAATTACAGACATCTTGATTTAGATACAAATATAACAAAAGAGAGAATTAAAAATGAAGCACGTTCCATTGTACGCTGTAAAACAGCCGGAATTCGTACACCGGCTTTATATTTAGTTGATTTTGAGCGTCGTCGAATTTACATGGAACATTTCGAACGGAACGTAACTGTCAAAGATTTTATCATAAATTTGACGAAAACTGGCAGTGAAAATGAAACAAACAGCCTGAACATACTAGCCAAAATGATTGGCGAAACTGTTCGAACATTACACGACACCAACATTATACACGGAGACTTGACAACTTCTAATATATTGTTGATACCGAAAAATGACAATGATAATTGGATTCAATGCTGTGAATTTCATTTGGTCATGATTGATTTTGGTTTATCATATGTTGACTCTAGTGCCGAAGACAAAGGCGTTGACCTATATGTCCTAGAAAGGGCATTAATAAGTACCCACAATGACTATCCAGAGTTATTCAATAAAATGTATGATGCATACAAAAGTTCTAGTAAGAGCAATATAAAAGAAATCATCAGTAAATATGAAGAAGTCAGAGCTAGAGGGAGAAAGAGAACTATGGTTGGTTGA
Protein
MTEDLKILKQGAEAKLYICNYLGRPTLIKERFVKNYRHLDLDTNITKERIKNEARSIVRCKTAGIRTPALYLVDFERRRIYMEHFERNVTVKDFIINLTKTGSENETNSLNILAKMIGETVRTLHDTNIIHGDLTTSNILLIPKNDNDNWIQCCEFHLVMIDFGLSYVDSSAEDKGVDLYVLERALISTHNDYPELFNKMYDAYKSSSKSNIKEIISKYEEVRARGRKRTMVG

Summary

EMBL
BABH01041200    GAIX01003396    JAA89164.1    JTDY01002118    KOB72065.1    KQ461154    + More
KPJ08624.1    KZ149947    PZC76735.1    NWSH01002907    PCG67322.1    KQ459193    KPJ03060.1    AGBW02000859    OWR55752.1    ODYU01005877    SOQ47217.1    KQ971319    EFA00476.1    NEVH01006722    PNF37098.1    PYGN01000666    PSN42562.1    KK853119    KDR11130.1    GEZM01051279    GEZM01051277    JAV75061.1    BT127429    AEE62391.1    APGK01043155    KB741011    ENN75584.1    GBBI01003526    JAC15186.1    ATLV01024580    KE525352    KFB51693.1    UFQS01000164    UFQT01000164    SSX00675.1    SSX21055.1    QOIP01000011    RLU16816.1    GECL01000874    JAP05250.1    GL439757    EFN66807.1    CVRI01000069    CRL06977.1    AAAB01008807    EAA04620.4    KK107078    EZA60422.1    KQ978530    KYN30326.1    APCN01000204    GL888128    EGI66742.1    KQ976488    KYM83533.1    GDHF01023865    JAI28449.1    KQ981866    KYN34090.1    ADTU01019238    ADTU01019239    GGFM01007907    MBW28658.1    ACPB03014712    ADMH02000549    ETN65952.1    GGFJ01009027    MBW58168.1    GL448795    EFN83816.1    GEDC01010348    JAS26950.1    GAKP01018302    GAKP01018299    JAC40653.1    AXCM01005343    KQ982320    KYQ57741.1    GGFJ01009026    MBW58167.1    CH963876    EDW76722.1    HACG01019075    CEK65940.1    KQ779356    OAD51967.1    NNAY01000999    OXU25547.1    KQ435732    KOX77364.1    CP012525    ALC43077.1    KZ288230    PBC31592.1    AMQN01007664    KB301152    ELU05858.1    AXCN02000379    GGFJ01009142    MBW58283.1    GECZ01001367    JAS68402.1    GDKW01000342    JAI56253.1    CM000363    CM002912    EDX09294.1    KMY97705.1    CH480817    EDW50557.1    CH902618    EDV40367.1    KQ414855    KOC60153.1    BC097750    AAH97750.1    GFDL01010981    JAV24064.1    JXUM01020768    GAPW01003871    KQ560581    JAC09727.1    KXJ81810.1    CH916366    EDV96306.1    JXUM01043910    KQ561380    KXJ78775.1    JW876233    AFP08750.1    CH477380    EAT42218.1    KQ434938    KZC12147.1    PZQS01000012    PVD20899.1    GGFK01012379    MBW45700.1    CM000159    EDW93484.1    GFDF01006707    JAV07377.1    AE014296    BT022659    AAF50799.1    AAY55075.1    GFDF01004343    JAV09741.1    GBYB01004140    JAG73907.1    KQ978501    KYM93497.1    NIVC01001064    PAA72727.1    JH818091    EKC36864.1    BC155471    AAI55472.1    AAMC01020205    RJVU01060476    ROJ48030.1    NIVC01001063    PAA72743.1   
Pfam
PF00069   Pkinase        + More
PF08542   Rep_fac_C
PF00004   AAA
Interpro
IPR008266   Tyr_kinase_AS        + More
IPR000719   Prot_kinase_dom       
IPR022495   Bud32       
IPR011009   Kinase-like_dom_sf       
IPR012675   Beta-grasp_dom_sf       
IPR018163   Thr/Ala-tRNA-synth_IIc_edit       
IPR012947   tRNA_SAD       
IPR003593   AAA+_ATPase       
IPR003959   ATPase_AAA_core       
IPR013748   Rep_factorC_C       
IPR027417   P-loop_NTPase       
IPR008921   DNA_pol3_clamp-load_cplx_C       
SUPFAM
SSF56112   SSF56112        + More
SSF55186   SSF55186       
SSF48019   SSF48019       
SSF52540   SSF52540       
Gene 3D
PDB
4WWA     E-value=5.29158e-22,     Score=255

Ontologies

Topology

Length:
233
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00436
Exp number, first 60 AAs:
0.00153
Total prob of N-in:
0.14084
outside
1  -  233
 
 

Population Genetic Test Statistics

Pi
320.985703
Theta
227.627215
Tajima's D
1.179933
CLR
0.257724
CSRT
0.707114644267787
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号