Gene

KWMTBOMO12260  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009138

Annotation

mitochondrial_ribosomal_protein_L39_[Danaus_plexippus]

Location

Bomo_Chr20(-):10886353-10889204      View in EpiBrowser

Full name

39S ribosomal protein L39, mitochondrial      

Alternative Name

MRP-L5

Location in the cell

Cytoplasmic   Reliability : 1.838 Nuclear   Reliability : 1.399

CDS

ATGAAACGGCACGTTACTTGTTTGATGAAAAAACTAACAGAAAAAAGCCATTTTTCCACTCTACAAATAACAAGATTTTTAAGCACACAAGAGGCGATAGAACGTCGCAGCTATTTGTTCACGTTAGAAAAGAAACGGCAGATAGAAAATGTCGGTAGGATCGAAAAAATCGAAGTCCAATACAAAGGCATACCAAAAGACTGCACCTTGGTAATGAATAAAAACATTTCGACACCGTACGACTGTGCTAGACATCTAAGTGAATGGCACATGGAGAGCAGTGTCCTAGCTTTACTTGATGGAAATCTACATTGGGACATGCACAGACCACTGACTGAAAGCTGTACGCTTGAGTTTCAAAACTACAAAGCAGCAGAACCACAGCAAGTAAACAAGGCATTCTGGCGCACATGCTCGCTGATGCTTGGAGCGTGCGCTACCGTTGCATTCAAGGACACAGTTCCAGTACACCTACACAGTTTTCCACTGCCCGACATAAGAAGCGGTTCTTTCATCTATGATGTCGATCTTCCCACTCTAAGTGATTGGCAGCCAACTCACCAAGAGGTTTTGACCCTCGCTGCTGAGTATGTGAAACTGTGTCGGAAAGCTGTTCCTCTAGAAAGGCTGGAAGTAGGAGAGGAGCTCGCTTTGGAAATGTTTGTGGACAACGAGCACAAGAGCAAACAGATACCAAATATTGCTAAGACTAACGGTGAGATTGAGGATTAA

Protein

MKRHVTCLMKKLTEKSHFSTLQITRFLSTQEAIERRSYLFTLEKKRQIENVGRIEKIEVQYKGIPKDCTLVMNKNISTPYDCARHLSEWHMESSVLALLDGNLHWDMHRPLTESCTLEFQNYKAAEPQQVNKAFWRTCSLMLGACATVAFKDTVPVHLHSFPLPDIRSGSFIYDVDLPTLSDWQPTHQEVLTLAAEYVKLCRKAVPLERLEVGEELALEMFVDNEHKSKQIPNIAKTNGEIED

Subunit

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.

Similarity

Belongs to the mitochondrion-specific ribosomal protein mL39 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   RNA-mediated gene silencing   Translation regulation  

Feature

chain  39S ribosomal protein L39, mitochondrial

Uniprot

A0A2W1BSW4   A0A2A4J5S5   A0A2H1W2F8   A0A194QSX7   A0A1E1WNL2   A0A212FPS3   + More
A0A194QDM2   A0A0L7LCY3   A0A1L8DS18   A0A1B0D019   A0A240SY22   A0A336KGQ2   A0A1W4XAE2   A0A1I8MVZ3   A0A0M3QWA7   A0A0L0C0X7   A0A1B0AW53   W8CD29   A0A034VHR5   A0A0K8WKE2   A0A1A9Y9A1   B4HHV7   B4QKI1   Q2M186   B4GUG9   B3NHK6   A0A0A1X9K6   A0A1A9Z6N3   A0A1A9WQ07   B4LFL4   B4J2W8   G2J631   Q9VUJ0   B3M5Q5   D3TNV3   A0A1A9V5R6   A0A1W4UKU8   B4PIJ1   A0A1I8PZH3   A0A3B0JY55   A0A1B6I024   A0A0M8ZQ97   A0A1L8DSB5   A0A067QNC0   B4NM00   U5ER99   D6WTN4   B4KXM4   A0A1Y1NKA8   A0A1B6L588   A0A151JW91   A0A2J7QXP0   A0A182YA93   A0A182Q575   B0XCV0   A0A182FW07   A0A1S3DQ09   A0A310SDA7   A0A023ENC1   E2A912   A0A1S4FDK1   W5JVG2   A0A151I309   A0A151J7Z5   A0A084W8F0   A0A2M4AVX0   A0A158NMD8   A0A1Q3F8Q7   A0A182J8K1   A0A2M3ZAB5   A0A182I651   A0A2M4BU19   A0A2M3ZAE0   Q176F0   N6TI15   A0A182UWX8   A0A2M3ZAA2   A0A182KUW1   Q7QE50   A0A2M4BU13   A0A2M4BU72   J3JZA1   A0A182WRD2   A0A3Q0IQS3   A0A182UEN6   A0A182RLX8   F4X5T2   A0A026WEY3   A0A3L8DMD8   A0A182HAG9   A0A182K2U3   A0A1B6G9U6   E9J4M1   A0A151WVJ0   A0A182WEA8   A0A182MY80   A0A0P4WJ45   A0A2S2PB83   E2B7U7  

Pubmed

28756777    26354079    22118469    26227816    25315136    26108605    + More
24495485    25348373    17994087    22936249    15632085    25830018    10731132    12537572    12537569    20353571    17550304    24845553    18362917    19820115    28004739    25244985    24945155    20798317    20920257    23761445    24438588    21347285    17510324    23537049    20966253    12364791    14747013    17210077    22516182    21719571    24508170    30249741    26483478    21282665   

EMBL

KZ149947    PZC76734.1    NWSH01002907    PCG67321.1    ODYU01005877    SOQ47217.1    + More
KQ461154    KPJ08623.1    GDQN01002435    JAT88619.1    AGBW02000859    OWR55752.1    KQ459193    KPJ03060.1    JTDY01001610    KOB73368.1    GFDF01004832    JAV09252.1    AJVK01021173    AJWK01016311    UFQS01000339    UFQT01000339    SSX02988.1    SSX23355.1    CP012525    ALC43819.1    JRES01001055    KNC25950.1    JXJN01004503    JXJN01004504    GAMC01002666    JAC03890.1    GAKP01016903    JAC42049.1    GDHF01000757    JAI51557.1    CH480815    EDW41522.1    CM000363    CM002912    EDX10492.1    KMY99646.1    CH379069    EAL30689.2    CH479191    EDW26252.1    CH954178    EDV51801.1    GBXI01006882    JAD07410.1    CH940647    EDW70332.1    CH916366    EDV97138.1    BT128888    AEO46465.1    AE014296    AY071425    CH902618    EDV40689.2    CCAG010020749    EZ423105    ADD19381.1    CM000159    EDW94548.1    OUUW01000002    SPP76028.1    GECU01027438    JAS80268.1    KQ435911    KOX68920.1    GFDF01004844    JAV09240.1    KK853131    KDR10946.1    CH964278    EDW85368.1    GANO01002896    JAB56975.1    KQ971355    EFA07202.1    CH933809    EDW19731.1    GEZM01003865    JAV96516.1    GEBQ01021120    JAT18857.1    KQ981655    KYN38606.1    NEVH01009375    PNF33349.1    AXCN02002037    DS232720    EDS45117.1    KQ769179    OAD52946.1    GAPW01002685    JAC10913.1    GL437703    EFN70111.1    ADMH02000371    ETN66799.1    KQ976507    KYM82803.1    KQ979602    KYN20520.1    ATLV01021421    KE525318    KFB46494.1    GGFK01011599    MBW44920.1    ADTU01020393    GFDL01011138    JAV23907.1    GGFM01004725    MBW25476.1    APCN01003562    GGFJ01007351    MBW56492.1    GGFM01004732    MBW25483.1    CH477388    EAT42026.1    APGK01025895    KB740605    KB632095    ENN80044.1    ERL88752.1    GGFM01004617    MBW25368.1    AAAB01008848    EAA07061.3    GGFJ01007352    MBW56493.1    GGFJ01007350    MBW56491.1    BT128582    AEE63539.1    GL888742    EGI58172.1    KK107238    EZA54655.1    QOIP01000007    RLU20988.1    JXUM01122735    KQ566637    KXJ69955.1    GECZ01010564    JAS59205.1    GL768105    EFZ12290.1    KQ982701    KYQ51922.1    GDRN01054275    JAI66102.1    GGMR01014102    MBY26721.1    GL446209    EFN88240.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000037510    UP000092462    + More
UP000092461    UP000192223    UP000095301    UP000092553    UP000037069    UP000092460    UP000092443    UP000001292    UP000000304    UP000001819    UP000008744    UP000008711    UP000092445    UP000091820    UP000008792    UP000001070    UP000000803    UP000007801    UP000092444    UP000078200    UP000192221    UP000002282    UP000095300    UP000268350    UP000053105    UP000027135    UP000007798    UP000007266    UP000009192    UP000078541    UP000235965    UP000076408    UP000075886    UP000002320    UP000069272    UP000079169    UP000000311    UP000000673    UP000078540    UP000078492    UP000030765    UP000005205    UP000075880    UP000075840    UP000008820    UP000019118    UP000030742    UP000075903    UP000075882    UP000007062    UP000076407    UP000075902    UP000075900    UP000007755    UP000053097    UP000279307    UP000069940    UP000249989    UP000075881    UP000075809    UP000075920    UP000075884    UP000008237   

PRIDE

G2J631    Q9VUJ0   

Pfam

PF00069   Pkinase        + More
PF02824   TGS

Interpro

IPR018163   Thr/Ala-tRNA-synth_IIc_edit        + More
IPR012675   Beta-grasp_dom_sf       
IPR000719   Prot_kinase_dom       
IPR022495   Bud32       
IPR011009   Kinase-like_dom_sf       
IPR008266   Tyr_kinase_AS       
IPR012947   tRNA_SAD       
IPR004095   TGS       
IPR012676   TGS-like       

SUPFAM

SSF55186   SSF55186        + More
SSF56112   SSF56112       
SSF81271   SSF81271       

Gene 3D

3.10.20.30    

ProteinModelPortal

A0A2W1BSW4   A0A2A4J5S5   A0A2H1W2F8   A0A194QSX7   A0A1E1WNL2   A0A212FPS3   + More
A0A194QDM2   A0A0L7LCY3   A0A1L8DS18   A0A1B0D019   A0A240SY22   A0A336KGQ2   A0A1W4XAE2   A0A1I8MVZ3   A0A0M3QWA7   A0A0L0C0X7   A0A1B0AW53   W8CD29   A0A034VHR5   A0A0K8WKE2   A0A1A9Y9A1   B4HHV7   B4QKI1   Q2M186   B4GUG9   B3NHK6   A0A0A1X9K6   A0A1A9Z6N3   A0A1A9WQ07   B4LFL4   B4J2W8   G2J631   Q9VUJ0   B3M5Q5   D3TNV3   A0A1A9V5R6   A0A1W4UKU8   B4PIJ1   A0A1I8PZH3   A0A3B0JY55   A0A1B6I024   A0A0M8ZQ97   A0A1L8DSB5   A0A067QNC0   B4NM00   U5ER99   D6WTN4   B4KXM4   A0A1Y1NKA8   A0A1B6L588   A0A151JW91   A0A2J7QXP0   A0A182YA93   A0A182Q575   B0XCV0   A0A182FW07   A0A1S3DQ09   A0A310SDA7   A0A023ENC1   E2A912   A0A1S4FDK1   W5JVG2   A0A151I309   A0A151J7Z5   A0A084W8F0   A0A2M4AVX0   A0A158NMD8   A0A1Q3F8Q7   A0A182J8K1   A0A2M3ZAB5   A0A182I651   A0A2M4BU19   A0A2M3ZAE0   Q176F0   N6TI15   A0A182UWX8   A0A2M3ZAA2   A0A182KUW1   Q7QE50   A0A2M4BU13   A0A2M4BU72   J3JZA1   A0A182WRD2   A0A3Q0IQS3   A0A182UEN6   A0A182RLX8   F4X5T2   A0A026WEY3   A0A3L8DMD8   A0A182HAG9   A0A182K2U3   A0A1B6G9U6   E9J4M1   A0A151WVJ0   A0A182WEA8   A0A182MY80   A0A0P4WJ45   A0A2S2PB83   E2B7U7  

PDB

6NU3     E-value=1.60904e-42,     Score=432

KEGG

101741003    K09611 probable aminopeptidase NPEPL1 [EC:3.4.11.-] | (RefSeq) probable aminopeptidase NPEPL1

GO

GO:0000166   GO:0004674   GO:0005524   GO:0005840   GO:0043039   GO:0004812   GO:0003735   GO:0031047   GO:0032543   GO:0006417   GO:0006412   GO:0005762   GO:0005739   GO:0008234   GO:0015074   GO:0042147   GO:0005737   GO:0006428   GO:0000049   GO:0005975   GO:0004553  

Subcellular location

Mitochondrion  

Length:

243

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27166

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.21357

outside

1  -  243

 

 

Pi

337.239644

Theta

213.475168

Tajima's D

1.78784

CLR

0

CSRT

0.844357782110894

Interpretation

Uncertain