SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12257  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009143
Annotation
PREDICTED:_uncharacterized_protein_LOC105841615_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.388 Mitochondrial   Reliability : 1.533 Nuclear   Reliability : 1.334
 

Sequence

CDS
ATGAATCTAAGTCCACAGTACGGCGATAAAATCGTAAAGTTCTCGAACAGGAATCAAGAATATTATTATCACAATAAAGAGCCGCCGAACCGTTTCCCTGGTGATAAATTCGAAATCGTTCTTAGGAAAGTTCCACACGGCTCGAAGCCTGTTACCGCGTATGATTTGAACAAAAACGCAATTTACACGCCTTTAGTTAGGTATCACGTGCGGAAACCTTCGGACAGCAGTGACAAAAAGAAAATCGGTTTCCGAACGCCCGAGAAGTCTGTAAATATAATAAAAGACGGCCCCAATGAAATCATTAAACCAACGAAGCTCAGGTTTTACGTTTACGACATCCGCGAGGTTTTAGAAAAACTAAACAAATACATCACTAGGGCCAGTGTATATGAGAAGTCTGGGGAGCAGGAGGATCCGTTGGCGCCGGGAAAGAAATACACTATCACGGAAAGTGCCGAAAAGCCTGTAGAAGAAACTAAGAACTGGAGTCCGCATTATTCGTTGTGGAATTATTGGACGTACGACAAAGACGTATATCATGACGACTGCAAAGGAAACCTCGTGAAAATAAGCGGCATCTGCATCGAGCGACCTCCGTTTTAA
Protein
MNLSPQYGDKIVKFSNRNQEYYYHNKEPPNRFPGDKFEIVLRKVPHGSKPVTAYDLNKNAIYTPLVRYHVRKPSDSSDKKKIGFRTPEKSVNIIKDGPNEIIKPTKLRFYVYDIREVLEKLNKYITRASVYEKSGEQEDPLAPGKKYTITESAEKPVEETKNWSPHYSLWNYWTYDKDVYHDDCKGNLVKISGICIERPPF

Summary

Ontologies

GO

Topology

Length:
201
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.07660
outside
1  -  201
 
 

Population Genetic Test Statistics

Pi
172.067939
Theta
61.302552
Tajima's D
0.602386
CLR
0
CSRT
0.545972701364932
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 FEIVIR 100.00 9e-05
26822097 ISGICIERPPF 100.00 0.005
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