Gene

KWMTBOMO12249

Annotation

PREDICTED:_uncharacterized_protein_LOC105842415_[Bombyx_mori]

Location

Bomo_Chr20(+):10562535-10571436      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.647

CDS

ATGAGTGAGAAAGAAGAAAAGGAAAAGTACATCGAGGAATTGAGCGGTACGTTGAATCAGCAACAAGTCAATGAATTGCAATTAAGAATCGGTAAGATCGAATTATTATTTGAACAATATGACGTAGTACAAACTAAAATAGAATGCCTCGCTGACGATTTCAGCTCGCAAAGCACAGAGAGAGAAGATTTTGAATCAATTTATTACAAATCCCTTTCACAGGCTCAGGAGATTCTTTCTCGTAATTCTAAATTGTTACAAACCCAAGTGCATAGTTTTGAGGGTTGCTCTCATGTGAGTAATCATAGCCTGGTTAAATTGCCTACCATTAGTCTACCCAAATTTAATGGTTCATATAGCAACTGGCTGGAATTCCATGACACCTTCAGTAGTCTTATACATTCGAACGAGGCGATAGGAGAAATTAATAAATTTCACTACCTCAGGGCCTCGCTAGAAGGCTCTGCTGCTGTACTGCTTCAGGAGATTCAGTTCTCTGCCAGCAACTATTCTGTGGCGTGGAAGCTGTTATGTGAGAGGTACGATAATAAGCGCCTATTAATTCAAACACACGTTAATAATTTATTTAATATAGACGCAATAAAGAGTGAATCTTCGTTTAATTTAAGACGTTTCATAGATCAGCTGAATAAAAGCCTGAGAGCTTTAGAGTCGCTGGGTGAACCGACTGATCATTGGGACACTCTTCTCATCCACATGATGAGTCGTAAAATCGAACAGAAGACGCTGCGTGAATGGGAAGAGTGCAAAGGTCGTCTTGATAAAGAAAAGCCCATTTCTTTGTCCATATTTCTCGATTTCATTCGTAACCGGGCCGATCTATTAGAAACGATGGAATTTACTCGCTCTAATCTTCCTCACACACAAGTTCAGCCACCATAG

Protein

MSEKEEKEKYIEELSGTLNQQQVNELQLRIGKIELLFEQYDVVQTKIECLADDFSSQSTEREDFESIYYKSLSQAQEILSRNSKLLQTQVHSFEGCSHVSNHSLVKLPTISLPKFNGSYSNWLEFHDTFSSLIHSNEAIGEINKFHYLRASLEGSAAVLLQEIQFSASNYSVAWKLLCERYDNKRLLIQTHVNNLFNIDAIKSESSFNLRRFIDQLNKSLRALESLGEPTDHWDTLLIHMMSRKIEQKTLREWEECKGRLDKEKPISLSIFLDFIRNRADLLETMEFTRSNLPHTQVQPP

Uniprot

A0A2A4JBY8   H9J9C1   H9JIA8   A0A0L7LCW4   A0A0L7LB62   A0A2W1BRR1   + More
A0A194RGQ8   A0A151IIA8   A0A0N1IBH6   A0A0L7KRI4   A0A194RI04   A0A0L7L574   A0A2A4JL65   V5GYU6   V5GPJ6   A0A2A4JLG7   A0A2H1WXG3   A0A0J7KD82   S4NIJ2   V5I888   A0A0N0PBK0   A0A151IDD4   A0A2A4K5Q9   A0A151IJK3   A0A194RAG7   V5I8W0   A0A1Y1LJL9   A0A2S2P390   A0A2S2NIF1   A0A151X752   A0A0A9Z2N1   A0A194QJ48   A0A151IRH4   A0A069DYA1   A0A1E1WLQ7   A0A2S2PCB8   A0A026VRJ9   A0A151ICE7   A0A151IIA5   X1WJH1   A0A0N1IPF2   A0A195C7P8   A0A151IMM1   A0A1Y1MWT5   A0A151ITI6   X1XU47   A0A139W8E1   A0A151JF33   A0A151JAJ1   A0A3S2N9P3   A0A151IDJ5   X1WVV7   A0A0J7N4U0   A0A151IN79   A0A1Y1N4T1   A0A151ISI5   A0A023EZC2   A0A023EZB2   A0A182GTJ7   J9K774   A0A182RIS2   A0A2S2NTG1   J9LHB7   J9LVB4   A0A2S2PTX9   A0A151XF58   A0A1Y1KHZ5   A0A0A9YBV9   X1X9I2   A0A0L7QYE0   A0A0J7KS64   J9JT64   J9LAN2   D7GYB7   A0A2S2Q0A5   A0A2S2PWK4   A0A2S2NH31   A0A2S2PNZ4   A0A1Y1KFT0   A0A151I8M6   A0A151I689   X1WPD9   A0A151XJI2   A0A151JQI5   A0A151IWJ0   J9KCB6   X1X1J0   A0A151IYW7   A0A151IR94   A0A023EZK8   J9LYM7   A0A2S2PUJ2  

Pubmed

19121390    26227816    28756777    26354079    23622113    28004739    + More
25401762    26334808    24508170    18362917    19820115    25474469    26483478   

EMBL

NWSH01001945    PCG69607.1    BABH01004450    BABH01022219    BABH01022220    JTDY01001654    + More
KOB73239.1    JTDY01001855    KOB72712.1    KZ149999    PZC75356.1    KQ460211    KPJ16510.1    KQ977505    KYN02283.1    KQ459312    KPJ01687.1    JTDY01006550    JTDY01002030    JTDY01001260    KOB65898.1    KOB72276.1    KOB74365.1    KQ460205    KPJ16960.1    JTDY01006305    JTDY01002831    KOB66118.1    KOB70633.1    NWSH01001201    PCG72150.1    GALX01002843    JAB65623.1    GALX01002427    JAB66039.1    NWSH01001093    PCG72659.1    ODYU01011804    SOQ57759.1    LBMM01009058    KMQ88428.1    GAIX01014054    JAA78506.1    GALX01005110    JAB63356.1    KQ460970    KPJ10166.1    KQ977963    KYM98425.1    NWSH01000142    PCG79113.1    KQ977342    KYN03430.1    KQ460500    KPJ14270.1    GALX01004000    JAB64466.1    GEZM01055231    JAV73081.1    GGMR01011310    MBY23929.1    GGMR01004354    MBY16973.1    KQ982464    KYQ56128.1    GBHO01005506    GBHO01005503    JAG38098.1    JAG38101.1    KQ458793    KPJ04955.1    KQ981127    KYN09299.1    GBGD01000063    JAC88826.1    GDQN01003166    JAT87888.1    GGMR01014413    MBY27032.1    KK111574    EZA46352.1    KQ978056    KYM97755.1    KQ977557    KYN02007.1    ABLF02021176    ABLF02066403    KQ460545    KPJ14069.1    KQ978164    KYM96665.1    KQ977032    KYN06203.1    GEZM01018702    GEZM01018700    GEZM01018697    JAV90049.1    KQ981002    KYN10407.1    ABLF02006001    ABLF02006002    KQ973442    KXZ75531.1    KQ979016    KYN24380.1    KQ979276    KYN22031.1    RSAL01000402    RVE41913.1    KQ977959    KYM98432.1    ABLF02041505    LBMM01010061    KMQ87695.1    KQ976954    KYN06860.1    GEZM01012999    JAV92824.1    KQ981073    KYN09793.1    GBBI01004139    JAC14573.1    GBBI01004140    JAC14572.1    JXUM01252006    KQ640254    KXJ62375.1    ABLF02023723    GGMR01007417    MBY20036.1    ABLF02022040    ABLF02056888    ABLF02004142    GGMR01020322    MBY32941.1    KQ982204    KYQ59009.1    GEZM01086714    JAV59026.1    GBHO01015021    JAG28583.1    ABLF02042264    KQ414692    KOC63604.1    LBMM01003740    KMQ93188.1    ABLF02023842    ABLF02028949    ABLF02058391    ABLF02013385    ABLF02029502    ABLF02029511    GG695382    EFA13346.1    GGMS01001896    MBY71099.1    GGMS01000724    MBY69927.1    GGMR01003885    MBY16504.1    GGMR01018506    MBY31125.1    GEZM01086715    JAV59020.1    KQ978343    KYM95005.1    KQ978502    KYM93420.1    ABLF02006985    KQ982064    KYQ60564.1    KQ978679    KYN29321.1    KQ980852    KYN12196.1    ABLF02026305    KQ980737    KYN13736.1    KQ981142    KYN09177.1    GBBI01004032    JAC14680.1    ABLF02016109    ABLF02016113    GGMR01020500    MBY33119.1   

Proteomes

UP000218220    UP000005204    UP000037510    UP000053240    UP000078542    UP000053268    + More
UP000036403    UP000075809    UP000078492    UP000053097    UP000007819    UP000007266    UP000283053    UP000069940    UP000249989    UP000075900    UP000053825   

PRIDE

H9J9C1    H9JIA8   

Pfam

PF03564   DUF1759        + More
PF18701   DUF5641
PF05380   Peptidase_A17
PF05585   DUF1758
PF17921   Integrase_H2C2
PF00665   rve
PF02201   SWIB
PF07679   I-set
PF02945   Endonuclease_7

Interpro

IPR036397   RNaseH_sf        + More
IPR005312   DUF1759       
IPR040676   DUF5641       
IPR008737   Peptidase_asp_put       
IPR001878   Znf_CCHC       
IPR008042   Retrotrans_Pao       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR041588   Integrase_H2C2       
IPR021109   Peptidase_aspartic_dom_sf       
IPR003121   SWIB_MDM2_domain       
IPR036885   SWIB_MDM2_dom_sf       
IPR019835   SWIB_domain       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR038563   Endonuclease_7_sf       
IPR004211   Endonuclease_7       
IPR036691   Endo/exonu/phosph_ase_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF47592   SSF47592       
SSF48726   SSF48726       

Gene 3D

3.30.420.10     1.10.245.10     2.40.70.10     2.60.40.10     3.40.1800.10     3.60.10.10    

ProteinModelPortal

A0A2A4JBY8   H9J9C1   H9JIA8   A0A0L7LCW4   A0A0L7LB62   A0A2W1BRR1   + More
A0A194RGQ8   A0A151IIA8   A0A0N1IBH6   A0A0L7KRI4   A0A194RI04   A0A0L7L574   A0A2A4JL65   V5GYU6   V5GPJ6   A0A2A4JLG7   A0A2H1WXG3   A0A0J7KD82   S4NIJ2   V5I888   A0A0N0PBK0   A0A151IDD4   A0A2A4K5Q9   A0A151IJK3   A0A194RAG7   V5I8W0   A0A1Y1LJL9   A0A2S2P390   A0A2S2NIF1   A0A151X752   A0A0A9Z2N1   A0A194QJ48   A0A151IRH4   A0A069DYA1   A0A1E1WLQ7   A0A2S2PCB8   A0A026VRJ9   A0A151ICE7   A0A151IIA5   X1WJH1   A0A0N1IPF2   A0A195C7P8   A0A151IMM1   A0A1Y1MWT5   A0A151ITI6   X1XU47   A0A139W8E1   A0A151JF33   A0A151JAJ1   A0A3S2N9P3   A0A151IDJ5   X1WVV7   A0A0J7N4U0   A0A151IN79   A0A1Y1N4T1   A0A151ISI5   A0A023EZC2   A0A023EZB2   A0A182GTJ7   J9K774   A0A182RIS2   A0A2S2NTG1   J9LHB7   J9LVB4   A0A2S2PTX9   A0A151XF58   A0A1Y1KHZ5   A0A0A9YBV9   X1X9I2   A0A0L7QYE0   A0A0J7KS64   J9JT64   J9LAN2   D7GYB7   A0A2S2Q0A5   A0A2S2PWK4   A0A2S2NH31   A0A2S2PNZ4   A0A1Y1KFT0   A0A151I8M6   A0A151I689   X1WPD9   A0A151XJI2   A0A151JQI5   A0A151IWJ0   J9KCB6   X1X1J0   A0A151IYW7   A0A151IR94   A0A023EZK8   J9LYM7   A0A2S2PUJ2  

KEGG

105842415    no KO assigned | (RefSeq) uncharacterized LOC105842415

GO

GO:0015074   GO:0008270   GO:0003676   GO:0004190   GO:0016740   GO:0016021   GO:0003964  

Length:

300

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00215

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07656

outside

1  -  300

 

 

Pi

228.854662

Theta

179.2254

Tajima's D

0.904296

CLR

0.147838

CSRT

0.632168391580421

Interpretation

Uncertain