Gene

KWMTBOMO12240  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014194

Annotation

PREDICTED:_vacuolar_protein_sorting-associated_protein_35_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr20(+):10291410-10297860      View in EpiBrowser

Full name

Vacuolar protein sorting-associated protein 35      

Location in the cell

Cytoplasmic   Reliability : 1.802 Nuclear   Reliability : 2.099

CDS

ATGACAAACCAGGTGTCTCCAGTCGAAGAGCAGGAGAAACTCCTGGAGGAGGCCTTGAACATTGTTAAAGTTCAGGCATTTCAAATGAAAAGATGTCTCGACAAATCTAAATTAATGGACGCCCTGAAACATGCATCAACAATGCTGGGTGAATTGAGAACTTCACTGTTATCACCAAAGAGCTATTATGAGCTTTATATGGCAATAACAGATGAACTGCGTCACCTGGAGCTGTATCTTCTGGAGGAGTTCCAAAAGGGAAGGAAGGTTGCAGATCTTTATGAACTGGTCCAATATGCTGGGAACATTGTACCTAGATTGTACCTGTTAATCACAGTAGGACTGGTCTACATCAAAACAAACACGAATCTGCGAAGAGATCTATTGAAGGATCTGGTTGAGATGTGTCGCGGAGTTCAGCATCCTTTGAGAGGACTTTTCCTTAGGAATTACCTATTGCAGTGCACAAGGAACGTTTTACCGGACACACACGAAGCCCCAAATGAAAACGAGGGAACTGTACGAGATGCTGTTGATTTTGTCCTGATGAATTTCGCCGAAATGAACAAGCTGTGGGTCAGGATGCAGCACCAGGGACACTCAAGAGATAAAGAGCGCCGCGAACGAGAACGCTCAGAGCTTCGTATATTAGTTGGTACGAATTTGGTTCGACTGTCGCAACTGGAGTCCGTCACGGTGGAGGACTACCGCAGGATGGTGCTGCCCGGCATCTTGGAGCAGGTCGTGAGCTGCAGGGACGCCATAGCGCAGGAGTACCTCATGGAGTGTATCATACAGGTGTTCCCGGACGAGTTCCACCTGGCCAACTTACAGCCGTTCCTCAAGTCGTGTGCTGAACTCCAACCCGGAGTCAACATCAAGAACATCATCATAGCACTGATCGAGAGGCTCGCTTCGTATAGCCAGAGGAATGAAGGCAATATGAATCTAAGCGTGGTCCTGGAAGATGGACAAGAACAAGAAGTCCAACTGTTCGAAGTTTTCTCTGATCAAGTTGCTGCGATAACCCAGGTTAGCCAATCTTTGAAATACCCAGATATCATTTTAAAACAATGCAATGGCCGGCACAGATGTTACACAATCAATTGA

Protein

MTNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKSYYELYMAITDELRHLELYLLEEFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTNTNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHEAPNENEGTVRDAVDFVLMNFAEMNKLWVRMQHQGHSRDKERRERERSELRILVGTNLVRLSQLESVTVEDYRRMVLPGILEQVVSCRDAIAQEYLMECIIQVFPDEFHLANLQPFLKSCAELQPGVNIKNIIIALIERLASYSQRNEGNMNLSVVLEDGQEQEVQLFEVFSDQVAAITQVSQSLKYPDIILKQCNGRHRCYTIN

Description

Plays a role in vesicular protein sorting.

Similarity

Belongs to the VPS35 family.

Uniprot

A0A1E1WPM0   A0A3S2L9C1   A0A2A4J3P7   A0A0N1INF0   A0A194QFH4   A0A2W1BHY5   + More
H9JXC9   A0A1B6DHE0   A0A1B6DJ82   A0A2J7RBJ3   A0A067REE6   A0A1W4WZP8   A0A1Y1L5K3   A0A026X171   A0A154PEM6   A0A3L8DR35   A0A1Y1L104   A0A195CRL7   A0A0J7KZE6   K7ITP4   A0A195E754   A0A158NLJ4   A0A087ZYP1   A0A195B1Z9   A0A0C9R1A1   A0A0C9RRG2   A0A0C9Q717   A0A1B6G8I6   A0A1B6LFS4   A0A310SSW8   D6WTN7   A0A151XKC0   E2BGH6   E2B0Q3   A0A2A3EEH7   A0A195EYX3   E0W0D0   E9J671   A0A2H1WYA3   A0A2L2Y3Z6   A0A0N0BFA1   A0A1S3CUV1   A0A1B0C9T1   Q6DJN1   A0A1L8DVU9   F6STR3   A0A182WIW9   I7GI50   A0A084VF17   A0A182NHE2   A0A182TEI6   A0A2M4BE42   Q7PT27   W5JTI6   A0A182LWU4   A0A1S4FYT1   A0A3P4PKD1   Q16JB7   A0A182P9Z0   A0A182QYG6   A0A182FFX6   A0A182I3U4   A0A182X6J5   A0A182RB34   A0A2M4AIZ2   A0A0S7GMM4   A0A182J117   A0A182XZE0   A0A182SH88   A0A2K6KZ95   A0A2K6FCI8   T1ISA6   A0A1C7CZ67   A0A1D5Q1P9   A0A182JPG0   A0A182H4A9   A0A1Z5L3E2   A0A0S7GIP4   A0A2K5M5L6   A0A2K6D3R0   A0A2K6QZC5   A0A2I3LUV9   A0A2I3S6J6   A0A091SE65   A0A2I2YQ49   A0A1Q3F334   A0A1Q3F467   A0A090XCR5   A0A182VMW6   B3DL72   A0A2I3HK91   A0A1L8GLA7   A0A293LTE6   A0A146XV91   A0A093CT46   W5ME32   U4UI68   A0A218UWD5   A0A1V4KPU8   A0A093QUD4  

Pubmed

26354079    28756777    19121390    24845553    28004739    24508170    + More
30249741    20075255    21347285    18362917    19820115    20798317    20566863    21282665    26561354    18464734    17194215    24438588    12364791    14747013    17210077    20920257    23761445    17510324    25244985    20966253    17431167    26483478    28528879    25362486    16136131    22398555    25970599    27762356    23537049   

EMBL

GDQN01002197    JAT88857.1    RSAL01000405    RVE41887.1    NWSH01003436    PCG66308.1    + More
KQ461157    KPJ08095.1    KQ459053    KPJ04237.1    KZ150152    PZC72827.1    BABH01035847    BABH01035848    BABH01035849    GEDC01012177    JAS25121.1    GEDC01011537    JAS25761.1    NEVH01005896    PNF38206.1    KK852686    KDR18449.1    GEZM01067994    JAV67275.1    KK107063    EZA61104.1    KQ434878    KZC09884.1    QOIP01000005    RLU22742.1    GEZM01067995    JAV67274.1    KQ977349    KYN03351.1    LBMM01001796    KMQ95736.1    KQ979579    KYN20669.1    ADTU01019551    KQ976662    KYM78315.1    GBYB01009924    JAG79691.1    GBYB01009923    GBYB01009926    JAG79690.1    JAG79693.1    GBYB01009928    JAG79695.1    GECZ01011058    JAS58711.1    GEBQ01017448    GEBQ01009775    JAT22529.1    JAT30202.1    KQ759820    OAD62720.1    KQ971355    EFA05820.1    KQ982038    KYQ60787.1    GL448189    EFN85169.1    GL444666    EFN60725.1    KZ288269    PBC29874.1    KQ981914    KYN33107.1    DS235858    EEB19086.1    GL768221    EFZ11749.1    ODYU01011993    SOQ58055.1    IAAA01004349    IAAA01004350    IAAA01004351    IAAA01004352    IAAA01004353    LAA02902.1    KQ435804    KOX73031.1    AJWK01002738    BC075144    AAH75144.1    GFDF01003526    JAV10558.1    AB172209    BAE89271.1    ATLV01012360    KE524785    KFB36561.1    GGFJ01002174    MBW51315.1    AAAB01008807    EAA04647.5    ADMH02000483    ETN66270.1    AXCM01001132    CYRY02033022    VCX10288.1    CH478018    EAT34367.1    AXCN02000591    APCN01000222    GGFK01007429    MBW40750.1    GBYX01452493    JAO29022.1    JH431429    JSUE03026135    JXUM01109152    JXUM01109153    JXUM01109154    JXUM01109155    KQ565294    KXJ71121.1    GFJQ02005058    JAW01912.1    GBYX01452490    JAO29025.1    AHZZ02018658    AHZZ02018659    AHZZ02018660    AHZZ02018661    AHZZ02018662    AACZ04030068    KK948439    KFQ56315.1    CABD030100887    CABD030100888    GFDL01013137    JAV21908.1    GFDL01012683    JAV22362.1    GBIH01001580    JAC93130.1    BC167336    AAI67336.1    ADFV01124297    CM004472    OCT84624.1    GFWV01012018    GFWV01013508    MAA36747.1    GCES01040400    JAR45923.1    KL465352    KFV16064.1    AHAT01034963    KB632173    ERL89580.1    MUZQ01000107    OWK58124.1    LSYS01002285    OPJ86464.1    KL433035    KFW92131.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000005204    UP000235965    + More
UP000027135    UP000192223    UP000053097    UP000076502    UP000279307    UP000078542    UP000036403    UP000002358    UP000078492    UP000005205    UP000005203    UP000078540    UP000007266    UP000075809    UP000008237    UP000000311    UP000242457    UP000078541    UP000009046    UP000053105    UP000079169    UP000092461    UP000002279    UP000075920    UP000030765    UP000075884    UP000075902    UP000007062    UP000000673    UP000075883    UP000008820    UP000075885    UP000075886    UP000069272    UP000075840    UP000076407    UP000075900    UP000075880    UP000076408    UP000075901    UP000233180    UP000233160    UP000075882    UP000006718    UP000075881    UP000069940    UP000249989    UP000233060    UP000233120    UP000233200    UP000028761    UP000002277    UP000001519    UP000075903    UP000001073    UP000186698    UP000018468    UP000030742    UP000197619    UP000190648   

PRIDE

H9JXC9   

Pfam

PF03635   Vps35        + More
PF09747   DUF2052

Interpro

IPR005378   Vps35        + More
IPR040233   DUF2052       
IPR016024   ARM-type_fold       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

A0A1E1WPM0   A0A3S2L9C1   A0A2A4J3P7   A0A0N1INF0   A0A194QFH4   A0A2W1BHY5   + More
H9JXC9   A0A1B6DHE0   A0A1B6DJ82   A0A2J7RBJ3   A0A067REE6   A0A1W4WZP8   A0A1Y1L5K3   A0A026X171   A0A154PEM6   A0A3L8DR35   A0A1Y1L104   A0A195CRL7   A0A0J7KZE6   K7ITP4   A0A195E754   A0A158NLJ4   A0A087ZYP1   A0A195B1Z9   A0A0C9R1A1   A0A0C9RRG2   A0A0C9Q717   A0A1B6G8I6   A0A1B6LFS4   A0A310SSW8   D6WTN7   A0A151XKC0   E2BGH6   E2B0Q3   A0A2A3EEH7   A0A195EYX3   E0W0D0   E9J671   A0A2H1WYA3   A0A2L2Y3Z6   A0A0N0BFA1   A0A1S3CUV1   A0A1B0C9T1   Q6DJN1   A0A1L8DVU9   F6STR3   A0A182WIW9   I7GI50   A0A084VF17   A0A182NHE2   A0A182TEI6   A0A2M4BE42   Q7PT27   W5JTI6   A0A182LWU4   A0A1S4FYT1   A0A3P4PKD1   Q16JB7   A0A182P9Z0   A0A182QYG6   A0A182FFX6   A0A182I3U4   A0A182X6J5   A0A182RB34   A0A2M4AIZ2   A0A0S7GMM4   A0A182J117   A0A182XZE0   A0A182SH88   A0A2K6KZ95   A0A2K6FCI8   T1ISA6   A0A1C7CZ67   A0A1D5Q1P9   A0A182JPG0   A0A182H4A9   A0A1Z5L3E2   A0A0S7GIP4   A0A2K5M5L6   A0A2K6D3R0   A0A2K6QZC5   A0A2I3LUV9   A0A2I3S6J6   A0A091SE65   A0A2I2YQ49   A0A1Q3F334   A0A1Q3F467   A0A090XCR5   A0A182VMW6   B3DL72   A0A2I3HK91   A0A1L8GLA7   A0A293LTE6   A0A146XV91   A0A093CT46   W5ME32   U4UI68   A0A218UWD5   A0A1V4KPU8   A0A093QUD4  

PDB

5F0P     E-value=2.75458e-124,     Score=1139

KEGG

101737683    K18468 vacuolar protein sorting-associated protein 35 | (RefSeq) vacuolar protein sorting-associated

GO

GO:0042147   GO:0005829   GO:0030906   GO:0015031   GO:0030904   GO:0006886   GO:0005770   GO:0016021   GO:0008565   GO:0005737   GO:0006428   GO:0004812   GO:0000049   GO:0005975   GO:0004553  

PANTHER

PTHR11099  

Length:

369

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.17081999999999

Exp number, first 60 AAs:

0.00141

Total prob of N-in:

0.11622

outside

1  -  369

 

 

Pi

257.12203

Theta

180.672821

Tajima's D

1.258244

CLR

0

CSRT

0.729413529323534

Interpretation

Uncertain